GENSCAN 1.0	Date run: 11-Nov-116	Time: 16:59:28

Sequence gi568815593f:76616308_76833500 : 217193 bp : 42.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   2335   1507  829  2  1   89   68   521 0.467  39.73
 1.01 Init -   6923   6860   64  2  1   58   91    98 0.261   6.49
 1.00 Prom -   7256   7217   40                              -7.05

 2.00 Prom +   9902   9941   40                              -7.35
 2.01 Init +  10532  10534    3  1  0   26   95     0 0.230  -5.45
 2.02 Intr +  11103  11193   91  2  1   91   75   140 0.999  11.65
 2.03 Intr +  15552  15719  168  1  0   36  107   186 0.978  14.30
 2.04 Intr +  24181  24278   98  2  2   32   49    84 0.317  -2.29
 2.05 Intr +  24626  24796  171  1  0   39   91   181 0.984  12.72
 2.06 Intr +  36443  36526   84  1  0   84   94    52 0.184   4.50
 2.07 Intr +  38627  38696   70  1  1   69  106    44 0.240   2.14
 2.08 Intr +  41679  41798  120  1  0   76   78    49 0.533   2.25
 2.09 Intr +  42152  42360  209  0  2   90   78   299 0.917  26.97
 2.10 Intr +  48719  48868  150  1  0   53   94    91 0.914   5.64
 2.11 Intr +  52374  52537  164  2  2  119   53    70 0.993   4.45
 2.12 Intr +  55452  55676  225  0  0   58   90   256 0.997  18.98
 2.13 Intr +  57142  57282  141  1  0   70   97   123 0.997   9.95
 2.14 Intr +  57645  57729   85  0  1   52   71    51 0.979  -1.30
 2.15 Intr +  58170  58402  233  2  2   83   94   233 0.995  19.05
 2.16 Intr +  60911  61043  133  2  1   81   89   157 0.994  14.83
 2.17 Intr +  66808  66910  103  0  1   23   91   116 0.979   4.23
 2.18 Intr +  67469  67610  142  0  1   81  106   139 0.996  13.49
 2.19 Intr +  71470  71527   58  1  1  113  101     2 0.683   1.97
 2.20 Intr +  72502  72687  186  0  0   28   36   133 0.409   1.06
 2.21 Intr +  76817  76932  116  1  2   28   62    81 0.427  -2.17
 2.22 Intr +  77048  77135   88  2  1   52   91    86 0.894   4.35
 2.23 Intr +  79147  79359  213  0  0   79    2   226 0.869  11.09
 2.24 Intr +  81680  81840  161  1  2  103  106   182 0.999  19.36
 2.25 Intr +  84769  84906  138  1  0   65  100   123 0.999   9.86
 2.26 Intr +  86175  86283  109  0  1  107  115   115 0.996  15.47
 2.27 Term +  90893  91006  114  1  0   74   45   105 0.784   2.39
 2.28 PlyA +  91801  91806    6                               1.05

 3.00 Prom +  95491  95530   40                              -6.35
 3.01 Init + 100001 100088   88  1  1   91   94   166 0.681  16.35
 3.02 Intr + 116007 117057 1051  1  1   93   94   663 0.082  55.93
 3.03 Term + 126212 126383  172  2  1  127   48    83 0.818   4.52
 3.04 PlyA + 130441 130446    6                               1.05

 4.09 PlyA - 132913 132908    6                               1.05
 4.08 Term - 134496 134382  115  2  1   65   46   101 0.560   0.66
 4.07 Intr - 135520 135338  183  0  0   94   60   135 0.622   9.28
 4.06 Intr - 142430 142315  116  2  2   86   16   111 0.026   2.03
 4.05 Intr - 152726 152670   57  2  0   72   84    55 0.002   1.66
 4.04 Intr - 168315 168229   87  0  0   42   57   114 0.009   2.95
 4.03 Intr - 190367 190107  261  2  0   54    6   171 0.055   2.26
 4.02 Intr - 195976 195720  257  2  2   23   -5   166 0.157  -2.96
 4.01 Init - 197182 197062  121  1  1   68   94    62 0.626   5.20
 4.00 Prom - 197966 197927   40                              -8.45

 5.00 Prom + 201490 201529   40                              -6.45
 5.01 Init + 202876 202957   82  0  1   61  100   166 0.890  14.28
 5.02 Intr + 216383 217184  802  0  1  137  -37   547 0.093  36.68

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 113715 113724   10  2  1   77   93     3 0.820   0.54
S.002 Term + 116007 117196 1190  1  2   93   49   693 0.903  56.80
S.003 Term + 203583 203716  134  1  2   65   46    96 0.813   0.37


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:76616308_76833500|GENSCAN_predicted_peptide_1|298_aa
MKALIFAAAGLLLLLPTFCQSGMENDTNNLAKPTLPIKTFRGAPPNSFEEFPFSALEGWT
GATITVKIKCPEESASHLHVKNATMGYLTSSLSTKLIPAIYLLVFVVGVPANAVTLWMLF
FRTRSICTTVFYTNLAIADFLFCVTLPFKIAYHLNGNNWVFGEVLCRATTVIFYGNMYCS
ILLLACISINRYLAIVHPFTYRGLPKHTYALVTCGLVWATVFLYMLPFFILKQEYYLVQP
DITTCHDVHNTCESSSPFQLYYFISLAFFGFLIPFVLIIYCYAAIIRTLNAYDHRWLX

>gi568815593f:76616308_76833500|GENSCAN_predicted_CDS_1|894_bp
atgaaagccctcatctttgcagctgctggcctcctgcttctgttgcccactttttgtcag
agtggcatggaaaatgatacaaacaacttggcaaagccaaccttacccattaagaccttt
cgtggagctcccccaaattcttttgaagagttccccttttctgccttggaaggctggaca
ggagccacgattactgtaaaaattaagtgccctgaagaaagtgcttcacatctccatgtg
aaaaatgctaccatggggtacctgaccagctccttaagtactaaactgatacctgccatc
tacctcctggtgtttgtagttggtgtcccggccaatgctgtgaccctgtggatgcttttc
ttcaggaccagatccatctgtaccactgtattctacaccaacctggccattgcagatttt
cttttttgtgttacattgccctttaagatagcttatcatctcaatgggaacaactgggta
tttggagaggtcctgtgccgggccaccacagtcatcttctatggcaacatgtactgctcc
attctgctccttgcctgcatcagcatcaaccgctacctggccatcgtccatcctttcacc
taccggggcctgcccaagcacacctatgccttggtaacatgtggactggtgtgggcaaca
gttttcttatatatgctgccatttttcatactgaagcaggaatattatcttgttcagcca
gacatcaccacctgccatgatgttcacaacacttgcgagtcctcatctcccttccaactc
tattacttcatctccttggcattctttggattcttaattccatttgtgcttatcatctac
tgctatgcagccatcatccggacacttaatgcatacgatcatagatggttgtgn

>gi568815593f:76616308_76833500|GENSCAN_predicted_peptide_2|1190_aa
MDSESVSKVLWLDEIQQAVDDANVDKDRAKQWVTLVVDVNQCLEGKKSSDILSVLKSSTS
NANDIIPECADKYYDALVKAKELKSERGVCLLWPGEEMGKKSEDLMAIAVFSLAVRGKRE
DIIEEVTVGYIRENIWSASEELLLRFQATSSGPILREEFEARKSFLHEQEENVVKIQAFW
KGYKQRKEYMHRRQTFIDNTDSIVKNNEIVKIQSLLRANKARDDYKTLAFTYFRLLPKDP
LGWEKPLSASCSKNVSHLSSSSTRSQGRVGSENPPLTVIRKFVYLLDQSDLDFQEELEVA
RLREEVVTKIRANQQLEKDLNLMDIKIGLLVKNRITLEDVISHSKKLNKKKGGEMEILNN
TDNQGIKSLSKERRKTLETYQQLFYLLQTNPLYLAKLIFQMPQNKSTKFMDTVIFTLYNY
ASNQREEYLLLKLFKTALEEEIKSKVDQVQDIVTGNPTVIKMVVSFNRGARGQNTLRQLL
APVVKEIIDDKSLIINTNPVEVYKAWVNQLETQTGEASKLPYDVTTEQALTYPEVKNKLE
ASIENLRRVTDKVLNSIISSLDLLPYGLRYIAKVLKNSIHEKFPDATEDELLKIVGNLLY
YRYMNPAIVAPDGFDIIDMTAGGQINSDQRRNLGSVAKVLQHAASNKLFEGENEHLSSMN
NYLSETYQEFRKYFKEACNVPEPEEKFNMDKYTDLVTVSKPVIYISIEEIISTHSLLLEH
QDAIAPEKNDLLSELLGSLGEVPTVESFLGEGAVDPNDPNKANTLSQLSKTEISLVLTSK
YDIEDGEAIDSRSLMIKWDCLVVGKQAQGIHSFCIMQPQESGGYYQYFTDEETRHRTGIN
LFLGNTVTKWSRDSNPHDLKSSRAHTLDHKVLQLVEGKYNATTSSTESPDFDYQAFINFQ
EPYSRPGEYPQECFILRTKKLIIDVIRNQPGNTLTEILETPATAQQEVDHATDMVSRAMI
DSRTPEEMKHSQSMIEDAQLPLEQKKRKIQRNLRTLEQTGHVSSENKYQDILNEIAKDIR
NQRIYRKLRKAELAKLQQTLNALNKKAAFYEEQINYYDTYIKTCLDNLKRKNTRRSIKLD
GKGEPKGAKRAKPVKYTAAKLHEKGVLLDIDDLQTNQFKNVTFDIIATEDVGIFDVRSKF
LGVEMEKVQLNIQDLLQMQYEGVAVMKMFDKVKVNVNLLIYLLNKKFYGK

>gi568815593f:76616308_76833500|GENSCAN_predicted_CDS_2|3573_bp
atggactctgagagtgtttccaaagtgctttggctggatgagatacagcaagccgtcgat
gatgccaacgtggacaaggacagagcaaaacaatgggttactctggtggttgatgttaat
cagtgtttggaaggaaaaaaatcaagtgatattttgtctgtattgaagtcttccacttct
aatgcaaatgacataatcccggagtgtgctgacaaatactatgatgcccttgtgaaggca
aaagagctcaaatctgaaagaggggtctgcctactctggcctggggaagaaatgggaaag
aagtctgaggaccttatggccattgcagtcttttccttggcagtccgagggaagcgggag
gacattattgaggaagtcacagtaggttacattcgtgagaatatatggtctgcttcagaa
gagttgcttcttcgctttcaagccacaagctcaggacccatccttagggaagagtttgaa
gctagaaaatcatttttgcatgaacaagaagagaatgtggtcaaaatacaggctttttgg
aaaggatataaacaacggaaggagtatatgcacaggcggcaaacgttcattgataatact
gattctattgtgaagaataatgaaattgtgaaaatacagtcactgttgagagcgaacaaa
gctagagatgactacaaaacattggctttcacctacttccggctccttcccaaagatcct
ttgggctgggagaaaccactttctgcttcctgcagcaagaatgtaagtcacttatctagc
tcaagcacaaggtctcagggtcgagttggctctgaaaacccaccattaacagtaattcgc
aaatttgtatacctgctggaccaaagtgatttggatttccaggaggaactagaggttgca
cgattaagggaagaagtagtgaccaagatcagggccaatcaacagctggaaaaagacctg
aacctgatggacatcaagattggactgctggtgaagaacaggatcacactagaggatgta
atttcacatagtaaaaagctgaacaagaaaaaaggaggagaaatggaaatactgaataac
accgacaaccaaggaataaaaagtttgagtaaggagaggagaaaaacactagaaacatat
cagcagctgttttaccttttacagaccaaccctttatacttggctaagctgattttccag
atgccacagaacaagtccactaaatttatggatactgttattttcacactatataattat
gcctctaatcagcgagaagaatatctacttctcaagctttttaaaactgctctggaggaa
gaaataaaatcaaaagtggaccaggtacaggacatagttactggtaaccctacagtcatc
aagatggtcgtcagcttcaatagaggtgcccggggacagaacaccctgcgccaactcctg
gctccagtggtaaaagagatcatcgacgacaagtcgctgattatcaacacaaaccctgta
gaggtgtacaaggcttgggtgaaccaactagaaacacagactggagaggccagcaagttg
ccttatgatgtgaccacagaacaagctctaacatacccagaagtgaaaaataaactggag
gcttccattgagaacctgagaagggtcaccgacaaagtcctgaattctatcatttcttcc
cttgatctactgccttatggattgaggtatatagccaaagtactgaagaattcgatccat
gagaaattccccgatgcaacagaagatgagctattaaagattgttggaaacctcctgtac
tatcggtacatgaatccagccattgtagctccagatggctttgatatcatcgacatgaca
gctggaggtcagataaattctgaccaaaggagaaacttaggatcagtggccaaggttctt
cagcacgcagcctccaacaagctgtttgaaggagaaaatgagcatctctcatctatgaac
aattatttatcagagacgtatcaggaattcaggaaatatttcaaagaagcatgtaatgtc
cctgagccagaagagaagtttaatatggacaaatacacagacctggtgacagtcagcaaa
ccagtcatttatatttcaattgaagaaatcatcagcacacactcactcctgttggaacac
caggatgcaattgcccctgagaaaaatgacttactgagtgaattgctggggtcgctggga
gaggtgccaaccgtggaatcttttcttggggaaggagcagttgaccccaatgaccctaac
aaggcaaatacactaagtcagctttcaaagaccgagatttctcttgtcttgacaagcaaa
tatgacatagaggacggtgaagctatagatagccgaagcctcatgataaaatgggactgt
ctagttgtaggaaaacaagctcagggcatccactcattctgtattatgcaaccccaagag
agtggaggttattatcagtattttacagatgaggaaactaggcacagaacaggtataaac
cttttcctgggtaacacagttactaagtggagcagagattcaaacccacatgatttgaaa
tcctccagggcccacactcttgatcataaagttttacaacttgtcgagggcaagtataat
gctacaacatcaagcacagaaagcccagactttgattatcaagcattcataaactttcag
gagccttatagcagacctggtgaatatccgcaagaatgttttattttaaggaccaagaag
ctgataattgatgtgatccggaaccagccagggaacacattgacagaaatcttagagaca
ccagcaactgcgcaacaggaggtagaccatgccacggacatggtgagccgtgcaatgata
gattccaggactccagaagaaatgaagcatagccaatctatgattgaagatgcacagctg
cctcttgagcagaagaagaggaaaatccagaggaatcttcggacgttggaacagactgga
cacgtgtcatccgaaaataaataccaagacattctcaatgagattgccaaggatattcga
aatcaaagaatctatcgtaagcttcgaaaagctgaattggcaaaacttcagcagaccctg
aatgcacttaacaagaaggcagcattttatgaagagcaaatcaattattatgacacctac
ataaagacttgtttagacaacttaaaaagaaaaaatactcggagatcaattaaactagat
ggaaaaggagaacccaaaggggcgaagagagcgaagccagtgaagtacactgcagcaaag
ctgcatgagaaaggtgtcctgctagatatagatgatcttcaaacaaaccagtttaagaat
gttacatttgatatcatagctactgaagatgtaggcattttcgatgtaagatcaaaattc
cttggtgttgagatggaaaaggtgcaactcaatattcaggatttacttcagatgcaatat
gaaggagtagctgtaatgaaaatgtttgataaggttaaagtgaatgtaaaccttctcata
tacctgctgaacaagaagttctatggaaagtga

>gi568815593f:76616308_76833500|GENSCAN_predicted_peptide_3|436_aa
MGPRRLLLVAACFSLCGPLLSARTRARRPESKATNATLDPRSFLLRNPNDKYEPFWEDEE
KNESGLTEYRLVSINKSSPLQKQLPAFISEDASGYLTSSWLTLFVPSVYTGVFVVSLPLN
IMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRFVTA
AFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLK
EQTIQVPGLNITTCHDVLNETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSS
AVANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVS
SISCCIDPLIYYYASSECQREKDSLNGSNLIHKTISEDTGGLKWQLPFFKDSARQIAAAP
GYQKATVDIFPVSGSG

>gi568815593f:76616308_76833500|GENSCAN_predicted_CDS_3|1311_bp
atggggccgcggcggctgctgctggtggccgcctgcttcagtctgtgcggcccgctgttg
tctgcccgcacccgggcccgcaggccagaatcaaaagcaacaaatgccaccttagatccc
cggtcatttcttctcaggaaccccaatgataaatatgaaccattttgggaggatgaggag
aaaaatgaaagtgggttaactgaatacagattagtctccatcaataaaagcagtcctctt
caaaaacaacttcctgcattcatctcagaagatgcctccggatatttgaccagctcctgg
ctgacactctttgtcccatctgtgtacaccggagtgtttgtagtcagcctcccactaaac
atcatggccatcgttgtgttcatcctgaaaatgaaggtcaagaagccggcggtggtgtac
atgctgcacctggccacggcagatgtgctgtttgtgtctgtgctcccctttaagatcagc
tattacttttccggcagtgattggcagtttgggtctgaattgtgtcgcttcgtcactgca
gcattttactgtaacatgtacgcctctatcttgctcatgacagtcataagcattgaccgg
tttctggctgtggtgtatcccatgcagtccctctcctggcgtactctgggaagggcttcc
ttcacttgtctggccatctgggctttggccatcgcaggggtagtgcctctgctcctcaag
gagcaaaccatccaggtgcccgggctcaacatcactacctgtcatgatgtgctcaatgaa
accctgctcgaaggctactatgcctactacttctcagccttctctgctgtcttctttttt
gtgccgctgatcatttccacggtctgttatgtgtctatcattcgatgtcttagctcttcc
gcagttgccaaccgcagcaagaagtcccgggctttgttcctgtcagctgctgttttctgc
atcttcatcatttgcttcggacccacaaacgtcctcctgattgcgcattactcattcctt
tctcacacttccaccacagaggctgcctactttgcctacctcctctgtgtctgtgtcagc
agcataagctgctgcatcgaccccctaatttactattacgcttcctctgagtgccagagg
gaaaaagatagcttaaatggctctaatcttatacataaaaccatttcagaagacactggg
ggtttaaagtggcaactcccattttttaaagatagtgcccggcagatagcggcagcgcct
ggttaccagaaagcaactgtggatatttttcctgtctctgggtctggctga

>gi568815593f:76616308_76833500|GENSCAN_predicted_peptide_4|398_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGEALLTSQTGRWGKGAPHISE
EGRPGRDAPHFLDGMAAGKRRSSLPRWDGDRAETLLTFQTGQPRRGAPHVPDDRRPGRDA
PHFPDGSLPPITPHLSAHIEQLLSWEWSCAGLSLAKETAAAQLKENRPAHSNRKVLGVKV
KASKTKLAVDEPKEEGAMKRRMGRETKMQDTTENQNSNQESECYQNPGRLPRAVFQSRIP
TRILDIRPLSDARFANIFSHSFRHLELPTFLASSQPDLSISTSHAAALKGADNVTPGVPW
VTAAAASRAGRVFTMFSKTVRSQEPRGALAQHRDSRCQLQTPESASPERCLGTSVLHTHP
SRLLKLPKHGPTLEPLHVLRFSPLIYLQIQLLIQMPFH

>gi568815593f:76616308_76833500|GENSCAN_predicted_CDS_4|1197_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcacca
cccttaatccatttaaccctgagtggacacagcacctgtttcagagagcacagggttgga
gaggcgctcctcacatcccagacagggcggtggggcaaaggcgctccccacatctcagaa
gaagggcggccaggcagagatgctcctcacttcctagatgggatggcggccgggaagagg
cgctcctcacttcctagatgggatggcgaccgggcagagacgctcctcactttccagact
gggcagccacgcagaggggctcctcacgtcccagacgataggcggccaggcagagacgct
cctcacttcccagacgggtctctaccccccatcactccccacctctctgcccatattgag
cagctcctttcttgggagtggtcctgtgctggattgagtttagccaaggagactgctgct
gcacagctcaaagaaaaccgacctgctcactccaacaggaaagtcctgggggtcaaagta
aaagcatcaaagactaagttagcggtggatgagccaaaagaggagggagctatgaagagg
aggatgggaagagaaaccaagatgcaagatactacagaaaaccagaattcaaatcaagaa
tcagaatgctaccagaatcctggaagactccctcgtgctgtcttccagtcacgaattccc
accaggattttggatattagacctttgtcagatgcacggtttgcaaatattttctcacat
tctttcaggcacctggagctgccgacattcttagcttcctctcagccagacctctccatt
tctacctcccatgctgctgctctcaaaggtgctgacaatgtcacacctggtgtcccctgg
gtgacagcagcagctgccagcagagcaggcagggtcttcacgatgttttccaaaactgtc
aggtcacaagaaccacgtggagcacttgctcaacatagagattccagatgccagctgcag
actcctgaatcagcatctccagagagatgcctgggcacctctgtgcttcacacacacccc
agcaggctgctgaagttacccaaacacggccccaccttggaacctttgcatgtgctgcgc
ttttctccactgatctatctgcagatccagctcctcatccagatgccttttcattaa

>gi568815593f:76616308_76833500|GENSCAN_predicted_peptide_5|295_aa
MRSPSAAWLLGAAILLAASLSCSGTIQGTSRSSKGRSLIGKVDGTSHVTGKGVTVETVFS
VDEFSASVLTGKLTTVFLPIVYTIVFVVGLPSNGMALWVFLFRTKKKHPAVIYMANLALA
DLLSVIWFPLKIAYHIHGNNWIYGEALCNVLIGFFYGNMYCSILFMTCLSVQRYWVIVNP
MGHSRKKANIAIGISLAIWLLILLVTIPLYVVKQTIFIPALNITTCHDVLPEQLLVGDMF
NYFLSLAIGVFLFPAFLTASAYVLMIRMLRSSAMDENSEKKRKRAIKLIVTVLAI

>gi568815593f:76616308_76833500|GENSCAN_predicted_CDS_5|885_bp
atgcggagccccagcgcggcgtggctgctgggggccgccatcctgctagcagcctctctc
tcctgcagtggcaccatccaaggaaccagtagatcctctaaaggaagaagccttattggt
aaggttgatggcacatcccacgtcactggaaaaggagttacagttgaaacagtcttttct
gtggatgagttttctgcatctgtcctcactggaaaactgaccactgtcttccttccaatt
gtctacacaattgtgtttgtggtgggtttgccaagtaacggcatggccctgtgggtcttt
cttttccgaactaagaagaagcaccctgctgtgatttacatggccaatctggccttggct
gacctcctctctgtcatctggttccccttgaagattgcctatcacatacatggcaacaac
tggatttatggggaagctctttgtaatgtgcttattggctttttctatggcaacatgtac
tgttccattctcttcatgacctgcctcagtgtgcagaggtattgggtcatcgtgaacccc
atggggcactccaggaagaaggcaaacattgccattggcatctccctggcaatatggctg
ctgattctgctggtcaccattcctttgtatgtcgtgaagcagaccatcttcattcctgcc
ctgaacatcacgacctgtcatgatgttttgcctgagcagctcttggtgggagacatgttc
aattacttcctctctctggccattggggtctttctgttcccagccttcctcacagcctct
gcctatgtgctgatgatcagaatgctgcgatcttctgccatggatgaaaactcagagaag
aaaaggaagagggccatcaaactcattgtcactgtcctggccatn