GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:26:09

Sequence gi568815597r:31160075_31396751 : 236677 bp : 46.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -   3513   3508    6                               1.05
 1.12 Term -   6139   6122   18  1  0  100   46    26 0.404  -2.08
 1.11 Intr -   9568   9439  130  0  1   66  106    30 0.417   3.30
 1.10 Intr -  21966  21786  181  1  1  105   44   181 0.170  14.33
 1.09 Intr -  22516  22456   61  1  1   85   68   188 0.999  14.81
 1.08 Intr -  23940  23743  198  0  0  105   92   237 0.995  25.35
 1.07 Intr -  25253  25173   81  2  0  113  115    25 0.993   7.53
 1.06 Intr -  28113  27976  138  0  0  118   68   323 0.988  33.96
 1.05 Intr -  30003  29896  108  0  0  115   17    68 0.673   2.88
 1.04 Intr -  48996  48875  122  1  2   30   78    87 0.012   2.11
 1.03 Intr -  60941  60808  134  1  2   99   -8   124 0.058   4.19
 1.02 Intr -  65832  65798   35  0  2   53   82    61 0.035  -0.98
 1.01 Init -  79473  79420   54  0  0  101  107   107 0.950  13.80
 1.00 Prom -  95998  95959   40                              -2.16

 2.08 PlyA -  96009  96004    6                               1.05
 2.07 Term - 109374 109253  122  1  2  101   44    48 0.543   0.34
 2.06 Intr - 111425 111305  121  2  1  102   93    91 0.990  11.07
 2.05 Intr - 121422 121300  123  0  0   87   95   205 0.999  21.88
 2.04 Intr - 129345 129180  166  2  1  101   98    64 0.984   8.66
 2.03 Intr - 131932 131839   94  2  1   77  109   101 0.975  10.12
 2.02 Intr - 133274 133145  130  2  1   84   45   108 0.932   6.37
 2.01 Init - 136677 136537  141  0  0   90  115    89 0.936  11.93
 2.00 Prom - 158929 158890   40                              -3.06

 3.00 Prom + 162547 162586   40                              -6.66
 3.01 Init + 164686 164746   61  0  1   83   16   120 0.607   5.71
 3.02 Intr + 177101 177201  101  0  2  106   88    37 0.827   5.33
 3.03 Intr + 178883 178974   92  1  2   93   80    61 0.882   4.59
 3.04 Intr + 186566 186666  101  2  2   62   97    29 0.879   0.95
 3.05 Intr + 188755 188900  146  2  2  116   63    90 0.983   9.30
 3.06 Term + 203958 204119  162  2  0   83   54   203 0.987  14.34
 3.07 PlyA + 205407 205412    6                              -1.95

 4.07 PlyA - 205602 205597    6                               1.05
 4.06 Term - 205865 205812   54  2  0  123   43    35 0.195   0.06
 4.05 Intr - 207420 207319  102  0  0   82   99    98 0.839  10.67
 4.04 Intr - 208096 207962  135  1  0   48   27   156 0.982   6.26
 4.03 Intr - 209483 209311  173  0  2  114  115   136 0.978  18.56
 4.02 Intr - 212952 212868   85  0  1   35   97   147 0.822   9.69
 4.01 Init - 213899 213777  123  2  0  106   39    94 0.772   6.49
 4.00 Prom - 217541 217502   40                              -6.26

 5.00 Prom + 221749 221788   40                              -2.96
 5.01 Sngl + 226607 227608 1002  1  0   56   43   401 0.678  29.35
 5.02 PlyA + 229998 230003    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  60941  60791  151  1  1   99   46   133 0.834   7.58
S.002 Init -  65820  65798   23  0  2   98   82    43 0.930   3.88


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:31160075_31396751|GENSCAN_predicted_peptide_1|419_aa
MGKCSGRCTLVAFCCLQLCPTSMEVAVTEIRYYAVVILLYFHIKSLSLDWELLEAWKCPL
SVDMECGPQKELSEFLAQWDGLPVKATEGIFPVKGELDGSQDVSYPIGSTPTPWELGLFV
ANDKNQQDKEGEPALGMAVFRGLKDGSGHSLVAALERQIFDFLGYQWAPILANFLHIMAV
ILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLHRSW
WMENGPGCLVTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFVFACYV
SKVFLEEEDSWWESCPQILPLQDPVSLSSPPPPIPNMRRPSSAVDFIGGFDSYGYQAPQK
TSHLQLQPLYTNCPRYWATAVNRTDKALDFFLTAYLLDRININALVSLPNNPKKDNDNP

>gi568815597r:31160075_31396751|GENSCAN_predicted_CDS_1|1260_bp
atgggcaagtgcagcgggcgctgcacgctggtcgccttctgctgcctgcagctgtgtccc
accagcatggaggtggcagtcaccgaaatcaggtactatgctgttgtaattctgctctat
ttccacatcaaatccctctccctggactgggagctccttgaggcctggaagtgtccactg
agtgtggacatggagtgtggccctcagaaggaactcagtgaattcttggcccagtgggat
ggtcttcctgttaaagccacggagggcatcttccctgtgaagggagagcttgatggctcc
caggatgtcagttaccccattggatccactcccaccccctgggagttaggactctttgtt
gcaaatgacaaaaatcagcaggacaaggagggagaaccagctttaggcatggctgtattc
agaggcctgaaagatggctcaggacattcccttgtggctgcgctggagcggcagatcttt
gacttcctgggctaccagtgggctcccatcctagccaacttcctgcacatcatggcagtc
atcctgggcatctttggcaccgtgcagtaccgctcccggtacctcatcctgtatgcagcc
tggctggtgctctgggttggctggaatgcatttatcatctgcttctacttggaggttgga
cagctgtcccaggaccgggacttcatcatgaccttcaacacatccctgcaccgctcctgg
tggatggagaatgggccaggctgcctggtgacacctgttctgaactcccgcctggctctg
gaggaccaccatgtcatctctgtcactggctgcctgcttgactacccctacattgaagcc
ctcagcagcgccctgcagatcttcctggcactgttcggcttcgtgttcgcctgctacgtg
agcaaagtgttcctggaggaggaggacagctggtgggagtcctgccctcagattcttccc
cttcaggacccagtctccctctcctcgcccccgccgccgatccctaacatgcgccgcccc
tcttccgcagttgacttcatcggcggctttgactcctacggataccaggcgccccagaag
acgtcgcatttacagctgcagcctctgtacacgaactgtcctagatactgggctacagca
gtgaacaggacagacaaggccctagatttctttcttacagcttacctactggacagaatc
aacataaatgctcttgttagtcttcctaacaatcctaagaaagacaatgacaacccctga

>gi568815597r:31160075_31396751|GENSCAN_predicted_peptide_2|298_aa
MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM
LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD
GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD
IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG
LSLSSEGSYLLSNAMDNTASPSYWDLDVFSCLKKKRALTGSSMSSWTLPTEETASAID

>gi568815597r:31160075_31396751|GENSCAN_predicted_CDS_2|897_bp
atgatagaacagcagaagcgtaagggcccagagttgccgctggttccagtcaagcggcag
cggcatgagttgctgttgggagcggggtctggcccaggagccgggcagcagcaggcgacg
ccgggagccttgctgcaagcgggacctccaagatgttcctcccttcaagccccaatcatg
ctgctctctggacatgaaggggaagtctactgctgcaagttccaccccaacggatccacc
ttagcatctgcaggatttgaccgactgatattactgtggaatgtctatggtgactgtgat
aactatgccacactgaagggacacagtggagcagtgatggaattgcattacaacacagat
ggcagtatgcttttctcagcatccacagataaaaccgtggctgtgtgggatagtgaaaca
ggtgagagggttaaaaggctaaagggacatacttcctttgtgaattcctgttatccagcc
aggagaggccctcagcttgtctgcactggcagtgacgatggcacagttaagctttgggac
atccggaagaaagcagccatccagacatttcagaacacgtaccaggtgttagctgtgacc
ttcaatgacacaagtgatcagattatttctggtggaatagacaatgatatcaaggtctgg
gacctgcgccagaacaagctaacctacaccatgagaggccatgcagattcagtgactggc
ctgagtttaagttctgaaggctcttatcttttgtccaatgcaatggacaatacagctagc
cccagttattgggatttagatgtgttttcctgcttgaaaaagaaaagagccttaacaggt
agcagtatgtcaagttggactttgcccaccgaggaaacagcatctgccattgattga

>gi568815597r:31160075_31396751|GENSCAN_predicted_peptide_3|220_aa
MGLQVPLGTEQLGVMDNMIDGLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRI
KVSLSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGH
FAKDCFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSS
DSDSSDSESDTGKRARHTSKDSKAAKKKKKKKKHKKKHKE

>gi568815597r:31160075_31396751|GENSCAN_predicted_CDS_3|663_bp
atgggcctgcaggtgcccctgggcacagaacaactgggcgtcatggacaacatgattgat
ggtctggtccatcgaactcatatgtcatcctgtcgggtggataagccctctgagatagta
gatgttggagataaagtgtgggtgaagcttattggccgagagatgaaaaatgatagaata
aaagtatccctctccatgaaggttgtcaatcaagggactgggaaagaccttgatcccaac
aatgttatcattgagcaagaagagaggcggaggcgatccttccaggattacactgggcag
aagatcacccttgaggctgtcttgaacactacctgcaagaagtgtggctgtaaaggccac
tttgcaaaagattgtttcatgcaaccaggtgggactaaatactctctgatacctgatgag
gaagaggaaaaggaagaggcaaagtcagcagagtttgagaagcctgaccctacaaggaat
ccttctagaaaaagaaagaaggagaagaagaaaaagaaacatagagataggaagtcatct
gactctgacagctcagactctgagagtgatacaggcaagagggcaaggcacacatcaaaa
gacagcaaggcagcaaagaagaagaaaaagaagaagaagcacaagaagaagcacaaggag
tga

>gi568815597r:31160075_31396751|GENSCAN_predicted_peptide_4|223_aa
MGLEELTELAEFLQEGSWERPELKLGAVRRNRKSPEHLQGRPSITMVDAFLGTWKLVDSK
NFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETT
ADDRKVKERELEELPNENQLMYVCWQHPELRNHFKGIQSQDFVVAALLLAKESIVTLDGG
KLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA

>gi568815597r:31160075_31396751|GENSCAN_predicted_CDS_4|672_bp
atgggccttgaagagctgaccgaattggcagaatttctgcaggaggggagctgggaacga
cctgagctaaagctcggagctgtgcgaagaaaccggaaaagcccagagcacttgcagggg
cggcccagcatcactatggtggacgctttcctgggcacctggaagctagtggacagcaag
aatttcgatgactacatgaagtcactcggtgtgggttttgctaccaggcaggtggccagc
atgaccaagcctaccacaatcatcgaaaagaatggggacattctcaccctaaaaacacac
agcaccttcaagaacacagagatcagctttaagttgggggtggagttcgatgagacaaca
gcagatgacaggaaggtcaaggaaagagagctggaagagctgccaaatgagaaccagctg
atgtatgtatgctggcagcacccagagctgaggaaccacttcaagggcatccagtcacag
gactttgtggttgctgccctcttgttggctaaagagtccattgtgacactggatggaggg
aaacttgttcacctgcagaaatgggacgggcaagagaccacacttgtgcgggagctaatt
gatggaaaactcatcctgacactcacccacggcactgcagtttgcactcgcacttatgag
aaagaggcatga

>gi568815597r:31160075_31396751|GENSCAN_predicted_peptide_5|333_aa
MHIPRHIHTDNFTIHTPRHIHTDDITHTPRPIHTDDLTIHNPRHIHTDDLTHTPRHNHTD
DLTHTPRHIHTDDHTIDTPRHIYTDDHTIDTPRHIHTEDLTIHTQTHPHRRPHHPHPQTH
PHRGPHHPHPDTSPRTTSPTPPDTSTQMTSPTPPGPSTQMTSPSTPPDTSTQTTSPTPPG
TTTQTTSPTPPDTSTQMTTPSTPPDTSTQMTTPSTPPDTSTQMTTPSIPPDTSTQMTSPS
TLRHIPTEDLTIHTQTHPHRPHYPHPDTSTQTTSPSTPRHIPTEDLTIHTQTHPHRGPHH
PHPDTSPQRTSPSTPRHIHTDDLTIHTQTHPHG

>gi568815597r:31160075_31396751|GENSCAN_predicted_CDS_5|1002_bp
atgcacatacccaggcacatccacacagacaacttcaccatccacactcccagacacatc
cacacagatgacatcacccacacccccaggcccatccacacagatgacctcaccatccac
aacccaagacatatccacacagatgacctcacccacacccctaggcacaaccacacagac
gacctcacccacacccccagacacatccacacagatgaccacaccatcgacacccccaga
cacatctacacagatgaccacaccatcgacacccccagacacatccacacagaggacctc
accatccacacccagacacatccacacagacgacctcaccatccacacccccagacacat
ccacacagaggacctcaccatccacacccagacacatccccacggacgacctcacccaca
cccccagacacttccacacagatgacatcacccacacccccaggcccatccacacagatg
acctcaccatccacacccccagacacatccacacagacgacctcacccacacccccaggc
acaaccacacagacgacctcacccacacccccagacacatccacacagatgaccacacca
tcgacacccccagacacatccacacagatgaccacaccatcgacacccccagacacatcc
acacagatgaccacaccatcgatacccccagacacatccacacagatgacctcaccatcc
acactcagacatatccccacagaggacctcaccatccacacgcagacacatccccacaga
cctcactatccacacccagacacatccacacagacgacctcaccatccacacccagacac
atccccacagaggacctcaccatccacacccagacacatccccacagaggacctcaccat
ccacacccagacacgtccccacagaggacctcaccatccacacccagacacatccacaca
gacgacctcaccatccacacccagacacatccccacggatga