GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:10:55

Sequence gi568815587f:47479092_47684478 : 205387 bp : 45.74% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.09 Intr -   3765   3604  162  0  0   91   73   111 0.959  10.07
 1.08 Intr -   4441   4362   80  2  2  111   75    70 0.999   7.27
 1.07 Intr -   5432   5298  135  0  0   53   92   158 0.685  13.24
 1.06 Intr -   7707   7659   49  0  1  112  103    45 0.983   6.65
 1.05 Intr -   8150   8068   83  0  2   72   78    39 0.953   0.66
 1.04 Intr -   9933   9746  188  2  2   34   72   228 0.035  15.13
 1.03 Intr -  70568  70510   59  2  2   94  103    17 0.076   1.48
 1.02 Intr -  74066  73901  166  1  1   79  105   123 0.187  13.06
 1.01 Init -  78727  78720    8  1  2   51   95     0 0.092  -2.57
 1.00 Prom -  79351  79312   40                              -5.56

 2.00 Prom +  84604  84643   40                              -5.16
 2.01 Init +  86532  86705  174  2  0  102   99   392 0.999  39.05
 2.02 Intr +  86815  86895   81  0  0   85   94   170 0.998  17.13
 2.03 Intr +  90609  90800  192  2  0   54   81   116 0.981   7.19
 2.04 Term +  92380  92538  159  0  0  103   41   173 0.999  12.04
 2.05 PlyA +  92868  92873    6                              -0.45

 3.04 PlyA -  93125  93120    6                               1.05
 3.03 Term -  94699  93839  861  1  0   62   48   728 0.947  58.93
 3.02 Intr -  96608  96502  107  0  2  109  116    18 0.846   6.63
 3.01 Init -  98908  98320  589  1  1   73  114   745 0.628  70.99
 3.00 Prom -  99249  99210   40                             -10.45

 4.00 Prom +  99301  99340   40                              -6.76
 4.01 Init + 100001 100067   67  1  1   88   72   150 0.996  12.64
 4.02 Intr + 100178 100243   66  0  0   92   78    34 0.759   1.68
 4.03 Intr + 101434 101531   98  2  2   96   90   124 0.995  13.13
 4.04 Intr + 101744 101893  150  1  0   98   78    98 0.999  10.16
 4.05 Intr + 102997 103122  126  0  0  120  105   233 0.998  29.08
 4.06 Intr + 103258 103377  120  0  0   69   75   100 0.990   7.49
 4.07 Term + 105223 105390  168  0  0   91   36   243 0.999  17.28
 4.08 PlyA + 105450 105455    6                               1.05

 5.00 Prom + 106149 106188   40                             -15.35
 5.01 Init + 107678 107762   85  1  1   72   81   101 0.716   6.96
 5.02 Intr + 108660 108758   99  1  0  107   35    61 0.804   2.78
 5.03 Term + 108913 109343  431  2  2  120   46   294 0.867  23.86
 5.04 PlyA + 110084 110089    6                              -3.44

 6.02 PlyA - 110616 110611    6                               1.05
 6.01 Sngl - 111719 110730  990  2  0   98   52  2258 0.999 218.07
 6.00 Prom - 113845 113806   40                              -6.76

 7.08 PlyA - 114101 114096    6                              -0.45
 7.07 Term - 114197 114177   21  2  0   74   54     6 0.166  -5.89
 7.06 Intr - 115240 115057  184  0  1   54   94   127 0.109   9.69
 7.05 Intr - 120262 120209   54  0  0  109   93    11 0.131   1.79
 7.04 Intr - 146650 146583   68  1  2   84   94    44 0.387   2.30
 7.03 Intr - 155643 155581   63  0  0   51   94    44 0.347   0.21
 7.02 Intr - 156480 156454   27  0  0  110   87    38 0.755   4.21
 7.01 Init - 163374 163288   87  0  0  117   80   200 0.999  20.74
 7.00 Prom - 174855 174816   40                              -4.16

 8.05 PlyA - 176439 176434    6                               1.05
 8.04 Term - 177560 177324  237  2  0   89   54    30 0.050  -4.13
 8.03 Intr - 189816 189750   67  2  1   69   99    24 0.254   0.51
 8.02 Intr - 198310 198180  131  1  2   59   92   125 0.846   9.49
 8.01 Intr - 200982 200882  101  1  2  101   93    64 0.993   8.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   9923   9746  178  2  1   56   72   220 0.959  16.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_1|310_aa
MCLCRKCRHFGVFCSGGSGSGGGTRRLPRDSASAARRRRRLRRRRQQLRQRQAQVQPLPL
VTTIISVSTNLTTLDNIISKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQY
GAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADS
EKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRA
MAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNLAG
LNTLGPQYLA

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_1|930_bp
atgtgcctgtgccggaagtgccgccattttggggtgttctgctctggcggcagcggcagc
ggcggcgggacgcggaggctcccccgggattcggcctcagcagcgaggcggcggcggcgg
ctgcggaggcgcaggcagcaactgaggcagcggcaggctcaggtgcagccgctgcccctg
gtaaccaccattatttctgtttctaccaatttgactactttagataacatcatctcaaag
aaaatgaacggcaccctggaccacccagaccaaccagatcttgatgctatcaagatgttt
gtgggccaggttccaaggacctggtctgaaaaggacttgcgggaactcttcgaacagtat
ggtgctgtgtatgaaatcaacgtcctaagggataggagccaaaacccgcctcagagcaaa
gggtgctgttttgttacattttacacccgtaaagctgcattagaagctcagaatgctctt
cacaacatgaaagtcctcccagggatgcatcaccctatacagatgaaacctgctgacagt
gagaagaacaatgcagtggaagacaggaagctgtttattggtatgatttccaagaagtgc
actgaaaatgacatccgagtcatgttctcttcgtttggacagattgaagaatgccggata
ttgcggggacctgatggcctgagccgaggttgtgcatttgtgacttttacaacaagagcc
atggcacagacggctatcaaggcaatgcaccaagcacagaccatggagggttgctcatca
cccatggtggtaaaatttgctgatacacagaaggacaaagaacagaagagaatggcccag
cagctccagcagcagatgcagcaaatcagcgcagcatctgtgtggggaaaccttgctggt
ctaaatactcttggaccccagtatttagca

>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_2|201_aa
MAATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLV
QDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALK
YQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLK
EFHKQITARATKDGTFVISKT

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_2|606_bp
atggcggccaccgcgctgctggaggccggcctggcgcgggtgctcttctacccgacgctg
ctctacaccctgttccgcgggaaggtgccgggtcgggcgcaccgggactggtaccaccgc
atcgaccccaccgtgctgctgggcgcgctgccgttgcggagcttgacgcgccagctggta
caggacgagaacgtgcgcggggtgatcaccatgaacgaggagtacgagacgaggttcctg
tgcaactcttcacaggagtggaagagactaggagtcgagcagctgcggctcagcacagta
gacatgactgggatccccaccttggacaacctccagaagggagtccaatttgctctcaag
taccagtcgctgggccagtgtgtttacgtgcattgtaaggctgggcgctccaggagtgcc
actatggtggcagcatacctgattcaggtgcacaaatggagtccagaggaggctgtaaga
gccatcgccaagatccggtcatacatccacatcaggcctggccagctggatgttcttaaa
gagttccacaagcagattactgcacgggcaacaaaggatgggacttttgtcatttcaaag
acatga

>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_3|518_aa
MESPEEPGASMDENYFVNYTFKDRSHSGRVAQGIMKLCLEEELFADVTISVEGREFQLHR
LVLSAQSCFFRSMFTSNLKEAHNRVIVLQDVSESVFQLLVDYIYHGTVKLRAEELQEIYE
VSDMYQLTSLFEECSRFLARTVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNT
EEFLHLPHRLLTDIISDGVPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKEIGENVHI
YLIGKESSRTHSLAVSLHCAEDDSISVSGQNSLCHQITAACKHGGDLYVVGGSIPRRMWK
CNNATVDWEWCAPLPRDRLQHTLVSVPGKDAIYSLGGKTLQDTLSNAVIYYRVGDNVWTE
TTQLEVAVSGAAGANLNGIIYLLGGEENDLDFFTKPSRLIQCFDTETDKCHVKPYVLPFA
GRMHAAVHKDLVFIVAEGDSLVCYNPLLDSFTRLCLPEAWSSAPSLWKIASCNGSIYVFR
DRYKKGDANTYKLDPATSAVTVTRGIKVLLTNLQFVLA

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_3|1557_bp
atggaatcaccagaggagcctggagcatccatggatgagaactactttgtgaactacact
ttcaaagatcggtcacattcaggccgtgtggctcaaggcatcatgaaactgtgtctagag
gaggagctctttgctgatgtcaccatttcggtggaaggccgggagtttcagctccatcgg
ctggtcctctcagctcagagctgcttcttccgatccatgttcacttccaacctgaaggag
gcccacaaccgggtgattgtgctgcaggatgtcagcgagtctgttttccagctcctggtt
gattatatctaccatgggactgtgaaacttcgagctgaggagttgcaggaaatttatgag
gtgtcagacatgtatcagctgacatctctctttgaggaatgctctcggtttttggcccgc
acagtgcaagtgggaaactgccttcaggtgatgtggctggcagatcggcacagtgatcct
gagctctatacggctgccaagcactgtgccaagacccacctggcccagctgcagaataca
gaggaatttctccacttgccccaccgcttactcacagatatcatctcggatggagttccg
tgttctcagaacccaacagaggcaatagaagcctggatcaactttaataaagaggaaaga
gaggcttttgcagagtcactcaggacaagcttgaaggaaattggggagaatgtgcacatt
tacctgattgggaaagagtcatctcgtacccactcgttggctgtgtccttgcactgtgca
gaagatgactccatcagtgtaagtggccaaaacagtttgtgccaccagatcactgcggcc
tgcaagcatggtggagacttgtatgtggtgggagggtccatcccacggcgcatgtggaag
tgcaacaatgccaccgttgactgggagtggtgtgctcctttgcctcgggaccggctccag
cacaccctggtgtctgtgcccgggaaagatgccatatattcactgggtggcaagacactg
caagataccctctccaacgcagtcatttattatcgcgtaggtgataatgtgtggacagag
acaactcagctagaggtggctgtgtcaggggctgctggtgccaacctcaacgggatcatc
tacttactagggggggaggagaatgatctggacttctttaccaaaccttcccgactcatc
cagtgctttgacacagagacagacaaatgccatgtgaagccctatgtgctgccctttgca
ggccgcatgcacgcagctgtgcataaagatctggtgttcatcgtggctgaaggggactcc
ctggtgtgctacaatcccttgctagacagcttcacccggctttgccttcctgaggcctgg
agctctgccccatccctctggaagattgccagctgtaacgggagcatctatgtcttccgg
gaccgatataaaaagggggatgccaacacctacaagcttgaccctgccacttcagccgta
actgtcacaagaggtattaaggtgctgcttaccaatttgcagtttgtgttggcctaa

>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_4|264_aa
MAAAAVARLWWRGILGASALTRGTGRPSVLLLPVRRESAGADTRPTVRPRNDVAHKQLSA
FGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVP
TRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFAN
HPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWE
AFPVYRQPPESLKLEAGDKKPDAK

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_4|795_bp
atggcggcggcggcggtagccaggctgtggtggcgcgggatcttgggggcctcggcgctg
accagggggactgggcgaccctccgttctgttgctgccggtgaggcgggagagcgccggg
gccgacacgcgccccactgtcagaccacggaatgatgtggcccacaagcagctctcagct
tttggagagtatgtggctgaaatcttgcccaagtatgtccaacaagttcaggtgtcctgc
ttcaatgagttagaggtctgtatccatcctgatggcgtcatcccagtgctgactttcctc
agggatcacaccaatgcacagttcaaatctctggttgacttgacagcagtggacgtccca
actcggcaaaaccgttttgagattgtctacaacctgttgtctctgcgcttcaactcacgg
atccgtgtgaagacctacacagatgagctgacgcccattgagtctgctgtctctgtgttc
aaggcagccaactggtatgaaagggagatctgggacatgtttggagtcttctttgctaac
caccctgatctaagaaggatcctgacagattatggcttcgagggacatcctttccggaaa
gactttcctctatctggctatgttgagttacgttatgatgatgaagtgaagcgggtggtg
gcagagccggtggagttggcccaagagttccgcaaatttgacctgaacagcccctgggag
gctttcccagtctatcgccaacccccggagagtctcaagcttgaagccggagacaagaag
cctgatgccaagtag

>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_5|204_aa
MAATLQFLVCLVVAICLLSGVTTTQPHAGQPMDSTSVGGGLQEPEAPEVMFEVFPPSLGH
GGHSPPLTWLPLQLLWAGLELDVMGQLHIQDEELASTHPGRRLRLLLQHHVPSDLEGTEQ
WLQQLQDLRKGPPLSTWDFEHLLLTGLSCVYRLHAASEAEERGRWAQVFALLAQETLWDL
CKGFCPQDRPPSLGSWASILDPFP

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_5|615_bp
atggctgcgaccctgcagttcctggtttgcctggtggtagccatttgtctcctctctggt
gtgactacaacccagccccatgcagggcagcccatggacagcaccagcgtgggaggtggc
ctgcaggagccagaggccccggaagtgatgtttgaggtctttcctcccagcctgggacat
gggggccacagcccaccccttacatggctccccttgcagctgctctgggctgggctggag
ctggatgtcatggggcagctgcacatccaggatgaggaactagcgtccacacacccaggc
cgccgactcagactcctcctgcagcaccacgtgcccagtgacttggagggcactgagcag
tggctgcagcagctccaggacctgcggaaggggcctcctcttagcacttgggactttgaa
catctgctcctcacaggcctgtcctgcgtctaccggctccacgcagctagtgaggctgag
gaacggggccgctgggcccaggtcttcgctctcctggcacaggaaacactctgggacctg
tgcaaaggtttctgcccccaggaccggcccccttccctggggtcctgggcctccatcctt
gaccccttcccctga

>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_6|329_aa
MLPLLLGLLGPAACWALGPTPGPGSSELRSAFSAARTTPLEGTSEMAVTFDKVYVNIGGD
FDVATGQFRCRVPGAYFFSFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQ
SAMLQLDYGDTVWLRLHGAPQYALGAPGATFSGYLVYADADADAPARGPPAPPEPRSAFS
AARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPGAYFFSFTLGKLPR
KTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLLSHDHDGYGAYSNH
GKYITFSGFLVYPDLAPAAPPGLGASELL

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_6|990_bp
atgctgccgcttctgctgggcctgctgggcccagcggcctgctgggccctgggcccgacc
cccggcccgggatcctctgagctgcgctcggccttctcggcggcacgcaccacccccctg
gagggcacgtcggagatggcggtgaccttcgacaaggtgtacgtgaacatcgggggcgac
ttcgatgtggccaccggccagtttcgctgccgcgtgcccggcgcctacttcttctccttc
acggctggcaaggccccgcacaagagcctgtcggtgatgctggtgcgaaaccgcgacgag
gtgcaggcgctggccttcgacgagcagcggcggccaggcgcgcggcgcgcagccagccag
agcgccatgctgcagctcgactacggcgacacagtgtggctgcggctgcatggcgccccg
cagtacgcgctaggcgcgcccggcgccaccttcagcggctacctagtctacgccgacgcc
gacgctgacgcgcctgcgcgcgggccgcccgcgccccccgagccgcgctcggccttctcg
gcggcgcgcacgcgcagcttggtgggctcggacgctggccccgggccgcggcaccaacca
ctcgccttcgacaccgagttcgtcaacattggcggcgacttcgacgcggcggccggcgtg
ttccgctgccgtctgcccggcgcctacttcttctccttcacgctgggcaagctgccgcgt
aagacgctgtcggttaagctgatgaagaaccgcgacgaggtgcaggccatgatttacgac
gacggcgcgtcgcggcgccgcgagatgcagagccagagcgtgatgctggccctgcggcgc
ggcgacgccgtctggctgctcagccacgaccacgacggctacggcgcctacagcaaccac
ggcaagtacatcaccttctccggcttcctggtgtaccccgacctcgcccccgccgccccg
ccgggcctcggggcctcggagctactgtga

>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_7|167_aa
MADAASQVLLGSGLTILSQPLMYVKVLIQHYQESDKGEELGPGNVQKEVSSSFDHVIKEF
FASMLTYPFVLVSNLMAVNNCGVIFLKYSFEHTFFSSTVSTLSAAASEPGKAAGAPAAPA
AARAVSAQPGTRSLQPAARSPQPGARSRAQTEPDSTAAPSQFCKKVN

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_7|504_bp
atggcggacgcggccagtcaggtgctcctgggctccggtctcaccatcctgtcccagccg
ctcatgtacgtgaaagtgctcatccagcattaccaggagagtgacaagggtgaggagtta
ggacctggaaatgtacagaaagaagtctcatcttcctttgaccacgttatcaaggagttt
tttgcgagtatgttgacctatccctttgtgcttgtctccaatcttatggctgtcaacaac
tgtggagtaatcttcttaaaatacagctttgagcacaccttcttctcctctactgtaagc
accctgtccgctgccgcctcagagccgggaaaagcagccggagcccccgccgcccctgcc
gcagcgcgggcggtcagcgcgcagcccggcacccgcagcctgcagcctgcagcccgcagc
ccgcagcccggagccagatcgcgggctcagaccgaacccgactcgaccgccgcccccagc
cagttttgcaaaaaggtaaactga

>gi568815587f:47479092_47684478|GENSCAN_predicted_peptide_8|178_aa
XNKRDTHFTIEDLKSLGYHVCDTLLDFCDPDQMKFTQCLAELKELLRQEIHKKFHELGQD
VDLEGSWSDISLSDIESSTSGSDSSLSDGLPVHLANIADEAAKMASGKYAIKWSWASTQV
SPSALEIYLLLLKLKFPHLSPSVAISHLHFKSLAPSLLPPSSEQTAILVKTGSEARLP

>gi568815587f:47479092_47684478|GENSCAN_predicted_CDS_8|537_bp
ngtaataaaagagacacccactttaccatcgaagatctgaagtccttaggttatcatgtc
tgtgacacccttctggacttttgtgatcctgaccaaatgaagttcactcagtgtctagca
gagcttaaggagcttttacgacaggaaatccacaagaaattccatgaacttggacaagat
gtagatttagaaggaagttggagtgacatctctttgtctgacattgaatccagcaccagt
ggctctgacagttctctctcagatggtcttcctgttcacctagcaaacatagcagatgag
gctgccaagatggcttcgggaaaatatgccatcaagtggtcctgggccagcacacaagta
tctccttcagccttggaaatttatcttctgcttctgaaactgaagttcccgcacctttcc
ccctccgtggctatttcacacctccatttcaagtctcttgctccctctctgctgccacct
tcctccgagcaaacagccatactagtcaagactggttcagaagctaggctcccgtga