GENSCAN 1.0	Date run:  4-Nov-116	Time: 13:02:39

Sequence gi568815591f:76202713_76404170 : 201458 bp : 51.31% C+G : Isochore 3 (51 - 57 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    695    782   88  2  1   75   92    50 0.774   4.57
 1.02 Term +   4138   4206   69  0  0   96   55    66 0.933   2.33
 1.03 PlyA +   4426   4431    6                               1.05

 2.00 Prom +   5209   5248   40                              -3.51
 2.01 Init +   7422   7505   84  2  0   79   66    44 0.197   0.32
 2.02 Intr +  32316  32587  272  2  2  113   72   409 0.402  38.68
 2.03 Intr +  45476  45577  102  2  0  133   84   132 0.220  17.09
 2.04 Intr +  57084  57170   87  0  0   87   77    34 0.729   1.78
 2.05 Intr +  57194  57322  129  2  0   53   76   257 0.668  21.31
 2.06 Intr +  57405  57485   81  0  0  140   97    64 0.999  11.75
 2.07 Intr +  58640  58702   63  2  0   87   80   120 0.927   9.42
 2.08 Intr +  62053  62103   51  1  0  113   99    56 0.817   7.71
 2.09 Intr +  64546  64771  226  1  1   57   40   183 0.440   8.92
 2.10 Intr +  71372  71488  117  1  0   69   77    71 0.142   5.27
 2.11 Intr +  78729  79090  362  2  2  111  101   140 0.331  12.18
 2.12 Intr +  79936  80160  225  1  0  101  117   142 0.998  16.03
 2.13 Intr +  80252  80389  138  2  0   96   80   168 0.984  16.89
 2.14 Term +  82903  83131  229  1  1   97   52   236 0.906  17.33
 2.15 PlyA +  84554  84559    6                               1.05

 3.00 Prom +  99926  99965   40                              -4.11
 3.01 Init + 100001 100364  364  1  1  102  105   742 0.632  72.53
 3.02 Intr + 101090 101153   64  0  1  118   94   144 0.999  16.27
 3.03 Term + 101272 101461  190  1  1   94   42   288 0.972  22.04
 3.04 PlyA + 101559 101564    6                               1.05

 4.02 PlyA - 102510 102505    6                               1.05
 4.01 Sngl - 106882 106643  240  1  0   97   36   163 0.489   5.41
 4.00 Prom - 108442 108403   40                              -4.71

 5.05 PlyA - 114207 114202    6                               1.05
 5.04 Term - 127521 126865  657  0  0  113   48  1256 0.999 118.48
 5.03 Intr - 156112 156010  103  0  1  100   92   291 0.697  31.38
 5.02 Intr - 172772 172665  108  1  0   40   47   109 0.241   1.90
 5.01 Init - 180722 180580  143  2  2   83   70    65 0.417   3.77
 5.00 Prom - 184574 184535   40                              -3.71

 6.10 PlyA - 186650 186645    6                               1.05
 6.09 Term - 187663 187347  317  2  2  116   46   277 0.999  21.75
 6.08 Intr - 189329 189252   78  0  0   88   90    27 0.874   2.92
 6.07 Intr - 191004 190675  330  1  0  111  100   563 0.577  55.95
 6.06 Intr - 191192 191118   75  0  0   75  106    14 0.696   1.88
 6.05 Intr - 192618 192541   78  1  0  134   60    -5 0.518   1.32
 6.04 Intr - 195120 194806  315  1  0   95   80   506 0.893  47.09
 6.03 Intr - 196085 196008   78  0  0   99   68    47 0.708   3.82
 6.02 Intr - 197879 197574  306  0  0   78  101   411 0.818  38.37
 6.01 Intr - 200449 200363   87  2  0   44   80    51 0.075   0.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:76202713_76404170|GENSCAN_predicted_peptide_1|52_aa
XCSVSNVYFAVERNNLDKEMGDYFYGIKCWRLLCRRKLTDGATAPLASCQGL

>gi568815591f:76202713_76404170|GENSCAN_predicted_CDS_1|159_bp
nngtgtagtgttagcaatgtctactttgctgttgaaagaaataatctggataaggagatg
ggagactacttttacggtataaaatgctggaggctgctgtgccggcggaagctgacggac
ggtgccacggctcccttagcatcctgccagggcctctga

>gi568815591f:76202713_76404170|GENSCAN_predicted_peptide_2|721_aa
MPLGAGQPAPYTNLQLMAQPLVSDRAPQGQRPRPAAPGPATMSSTVNNGAASMQSTPDAA
NGFPQPSSSSGTWPRAEEELRAAEPGLVKRAHREILDHERKRRVELKCMELQEMMEEQGY
SEEEIRQKVGTFRQMLMEKEGVLTREDRPGGHIRVAARRLAGLGQAPCAEKRGEEKSSRD
WCVAETPRLTEGAEPGLEYAPFDDDDGPVDCDCPASCYRGHRGYRTKHWSSSSASPPPKK
KKKKKGGHRRSRCGSSSPLRKKKKSVKKHRRDRSRSSKCKRKEKNKEKKRLSPKHRDEGR
KTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGGRPGSAHSPPDVRTLRFAEGSR
AAGCAPPGLRSPRWPSGPFRAKGSDRGASAGPPGLQILEEVLAKKPSSPSPRVRDKAAAA
APTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPR
PAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSP
SPGAHGRRGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSR
DKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYYRPSPS
SSSSCLSSDYSTRSHSRSPSPGHSHGSYSSRSHGTRSRTRSPSRTPSPSYHSRSSSESGG
F

>gi568815591f:76202713_76404170|GENSCAN_predicted_CDS_2|2166_bp
atgcctctgggagctgggcaacctgccccctacaccaatctccagctgatggcacagccc
ttggtatcagacagagcaccccagggccagcggcccaggccagcggctccagggccagcc
acgatgtcctccaccgtgaacaacggggcggccagcatgcagtccacacccgacgccgcg
aacggcttcccgcagcccagctcctcctcggggacctggccgcgggcggaagaggagctg
cgcgccgcggagccgggcctggtgaagcgcgcgcaccgcgagatcctggaccacgagcgc
aagcggcgggtggagctcaagtgcatggagctgcaggagatgatggaggagcaggggtat
tcggaggaggagattcggcagaaagtggggacattccggcagatgctgatggagaaggag
ggagtgctcaccagggaggaccggcctgggggccacatccgggtagcagcccgcagactt
gcggggctaggtcaggccccctgcgccgagaaaaggggtgaagaaaagtcgtcccgagac
tggtgtgtggcggagaccccgcggctgaccgagggcgctgagccgggcctggagtacgcg
ccctttgacgatgacgacggcccagtggactgtgactgcccggcctcctgctaccgcggc
caccgcgggtacaggaccaagcattggtctagcagctcggcatcgccccctcccaagaaa
aagaagaaaaagaaaggcggccaccggagaagccgctgtgggagctcctcacccctccgc
aagaagaagaagagtgtgaagaagcatcgccgagacagatctcgaagctccaagtgcaaa
agaaaagagaagaacaaagagaagaagaggctgagccccaagcaccgagacgaagggcga
aagacgggcagccagcggtccagcggaagccggtcgccttccccgtcgggcggcagcgga
tgggggtcgccccagcggaacggcggcagcgggcagcggagcggagcgcacgggggccgc
cccggctcggcgcacagcccgcccgatgtacgtacgcttcgctttgcggagggttcccgc
gccgcgggctgcgcccccccgggacttcggtcaccccgctggccttcagggccctttcgg
gcaaaaggcagtgacagaggagccagtgcggggcctcctggccttcagatcctggaggaa
gttctggccaagaagcccagctcgccctcgcccagggtccgtgacaaggcggcggccgcc
gcacccacgccgcccgcgcgggggaaggagagcccgagcccgcgctcggcgccgtcgtcc
caaggtcgcggaggccgcgcggcgggcggggcgggcaggcggcggcggcggcggcgtagg
cggcggcgctcgcggtcctcggcgtccgcgccccgccgcaggggtcgccggcgcccccgg
cccgcgcccccccggggctcgtcgcgctcgctcagcagggcccgctccagcagcgactcc
ggcagcggccgcggcgcccccggccccgggcccgagcccggctctgagcgaggccacggc
ggacacgggaaacgggccaaggagcggcccccgcgcgcgcggcccgccagcacctctccg
tccccgggcgcgcacggccggcgcggcggcccagaagggaagagctcgtcgcgcagcccc
ggcccgcacccccgctcctggagctccagccgctcgccctccaaatctcgctcgcgctct
gcggagaagcggccccacagccccagccgctcgccgtcgcccaagaagcccctcagccgg
gacaaggacggcgagggccgcgcaaggcactctgaggccgaggccacccgcgcccggcgc
cgctcccgcagctactcgcccatccgcaagcggcgccgggactcgccaagcttcatggag
ccgcggcgcatcaccagcgcccgcaagcgtcctattccatactaccggcccagcccctct
tcctcctccagctgcttgagcagcgactactcgacccggagccacagccgcagccccagc
cccggccacagccacgggagctacagcagtcgcagccatgggacccgcagccggacacgc
agcccctcgaggacccccagtcccagctaccacagccggagcagctctgagagcgggggc
ttctga

>gi568815591f:76202713_76404170|GENSCAN_predicted_peptide_3|205_aa
MTERRVPFSLLRGPSWDPFRDWYPHSRLFDQAFGLPRLPEEWSQWLGGSSWPGYVRPLPP
AAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSLDVNHFAPDELTVKTKDGVVEI
TGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMPKLATQSNEIT
IPVTFESRAQLGGPEAAKSDETAAK

>gi568815591f:76202713_76404170|GENSCAN_predicted_CDS_3|618_bp
atgaccgagcgccgcgtccccttctcgctcctgcggggccccagctgggaccccttccgc
gactggtacccgcatagccgcctcttcgaccaggccttcgggctgccccggctgccggag
gagtggtcgcagtggttaggcggcagcagctggccaggctacgtgcgccccctgcccccc
gccgccatcgagagccccgcagtggccgcgcccgcctacagccgcgcgctcagccggcaa
ctcagcagcggggtctcggagatccggcacactgcggaccgctggcgcgtgtccctggat
gtcaaccacttcgccccggacgagctgacggtcaagaccaaggatggcgtggtggagatc
accggcaagcacgaggagcggcaggacgagcatggctacatctcccggtgcttcacgcgg
aaatacacgctgccccccggtgtggaccccacccaagtttcctcctccctgtcccctgag
ggcacactgaccgtggaggcccccatgcccaagctagccacgcagtccaacgagatcacc
atcccagtcaccttcgagtcgcgggcccagcttgggggcccagaagctgcaaaatccgat
gagactgccgccaagtaa

>gi568815591f:76202713_76404170|GENSCAN_predicted_peptide_4|79_aa
MPEPPHPAVGSCAARASLTSTAPCSTAPSPIDHPRAEECGRTARDWQAAPPAAPIQDSLG
EANWAPESGGEPLCQAKGL

>gi568815591f:76202713_76404170|GENSCAN_predicted_CDS_4|240_bp
atgcctgagcctccccaccccgctgtgggctcctgcgcggcccgagcctccctgacaagc
accgccccctgctccacggcgcccagtcccatcgaccacccaagggctgaggagtgcggg
cgcacagcacgggactggcaagcagctccacctgcggcccccatacaggattcactgggt
gaagccaactgggctcctgagtctggtggagaacctttatgtcaagctaagggattgtaa

>gi568815591f:76202713_76404170|GENSCAN_predicted_peptide_5|336_aa
MAMNLLAMKRFGKCYSRSFNGNLAWPAEEPRSVVIGAKKNVLTNQRSRVTPLGFLQQFVQ
MEEMPQLPGLVASTFPEQLSFLRRPSPAKMVDREQLVQKARLAEQAERYDDMAAAMKNVT
ELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKIEMVRAYREKIEK
ELEAVCQDVLSLLDNYLIKNCSETQYESKVFYLKMKGDYYRYLAEVATGEKRATVVESSE
KAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDAIAELDTL
NEDSYKDSTLIMQLLRDNLTLWTSDQQDDDGGEGNN

>gi568815591f:76202713_76404170|GENSCAN_predicted_CDS_5|1011_bp
atggccatgaaccttttggctatgaaacggtttgggaagtgctattccaggtccttcaac
ggaaacttagcctggcctgcagaagaaccacggagcgttgtgattggagcaaagaagaat
gtgctaacgaatcagagaagccgggtcaccccgctgggctttctgcagcagtttgtgcag
atggaagagatgccccagctacctggcctggtggcctccaccttccctgagcagctgtct
ttcttgcgcagacccagccccgcgaagatggtggaccgcgagcaactggtgcagaaagcc
cggctggccgagcaggcggagcgctacgacgacatggccgcggccatgaagaacgtgaca
gagctgaatgagccactgtcgaatgaggaacgaaaccttctgtctgtggcctacaagaac
gttgtgggggcacgccgctcttcctggagggtcatcagtagcattgagcagaagacatct
gcagacggcaatgagaagaagattgagatggtccgtgcgtaccgggagaagatagagaag
gagttggaggctgtgtgccaggatgtgctgagcctgctggataactacctgatcaagaat
tgcagcgagacccagtacgagagcaaagtgttctacctgaagatgaaaggggactactac
cgctacctggctgaagtggccaccggagagaaaagggcgacggtggtggagtcctccgag
aaggcctacagcgaagcccacgagatcagcaaagagcacatgcagcccacccaccccatc
cgattaggcctggctcttaactactccgtcttctactatgagatccagaacgccccagag
caagcgtgccacttggccaagaccgcgttcgacgacgccatcgccgagcttgacaccctc
aacgaggactcctacaaggactccacgctcatcatgcagctcctccgcgacaacctcacg
ctctggacgagcgaccagcaggacgacgatggcggcgaaggcaacaattaa

>gi568815591f:76202713_76404170|GENSCAN_predicted_peptide_6|554_aa
XSCSELHDEEECGCLGSLSALPLICYVALKLRLVGGPSRCRGRLEVMHGGSWGSVCDDDW
DVVDANVVCRQLGCGLALPVPRPLAFGQGRGPILLDNVECRGQEAALSECGSRGWGVHNC
FHYEDVAVLCDEFLPTQPPTRKMLTSRAPPTTLPNGKSEGSVRLVGGANLCQGRVEILHS
GLWGTVCDDDWGLPDAAVVCRQLGCGAAMAATTNAFFGYGTGHILLDNVHCEGGEPRLAA
CQSLGWGVHNCGHHEDAGALCAGLGPPTLTALPSSATREDWAWQTDPSATGVGPQPSRET
ALLTTAAWAAGKKSGRLRLVGGPGPCRGRVEVLHAGGWGTVCDDDWDFADARVACREAGC
GPALGATGLGHFGYGRGPVLLDNVGCAGTEARLSDCFHLGWGQHNCGHHEDAGALCAGEA
DSEGPEELGLQVQQDGSETTRVPTPRPRDGHLRLVNGAHRCEGRVELYLGQRWGTVCDDA
WDLRAAGVLCRQLGCGQALAAPGEAHFGPGRGPILLDNVKCRGEESALLLCSHIRWDAHN
CDHSEDASVLCQPS

>gi568815591f:76202713_76404170|GENSCAN_predicted_CDS_6|1665_bp
ncatcgtgctcagaactgcatgatgaagaagagtgtggctgtctgggtagtctctcagct
ctacccttgatttgctacgtggccctgaagctgaggctggtggggggccccagccgctgc
cggggccgcctggaagtcatgcacggtggctcctggggcagcgtctgtgatgacgactgg
gacgtggtggacgccaacgtagtgtgtcgccagctgggctgtggcctggcactgcccgtg
ccacggccccttgcctttggccaaggccgaggccccatcctgctggacaacgtggagtgc
cgcgggcaggaagctgcgctgagcgagtgcggcagccgcggctggggcgtccacaattgc
tttcactacgaggatgtggctgtcctgtgtgatgaattcttgccaacgcagcccccaaca
aggaagatgttaaccagtagagcacctcctacgacactgccgaatggaaaaagtgagggc
agcgtacgcctggtagggggcgcgaacctgtgtcagggccgagtggagatcctgcacagt
ggcctgtggggcaccgtgtgtgacgacgactgggggctgccggatgccgctgtggtctgt
cgtcagctgggctgcggggcggccatggccgccaccaccaacgccttcttcggctatggc
accggacacatcctgctggacaacgtgcactgcgaaggcggcgagccccgcctggcagcc
tgccagagcctgggctggggtgtgcacaactgcggccaccacgaggacgcgggcgcgctc
tgcgcaggcctgggtcccccaacgctcacagcactgccatcctcagccacaagagaggac
tgggcttggcagacagatccgtccgctacaggagttggcccccagccttcccgggagaca
gcactgctcaccaccgccgcctgggccgcggggaagaaaagtggacggctgcgactggtg
ggcggcccgggtccgtgccgcggccgcgtggaggtgttgcacgccgggggctggggcacc
gtgtgcgacgatgactgggactttgcggacgcgcgcgtggcctgccgcgaagcgggctgc
gggcctgcgctgggcgctacgggactgggccacttcggctacggccgcggccccgtgctg
ctggacaacgtgggctgcgccggcaccgaggctcgcctgagcgactgcttccacctgggc
tggggccagcacaactgcggccaccacgaggacgcgggagcgctctgcgcaggtgaggct
gacagcgaaggcccagaggagctgggactgcaagtccagcaggatggttctgagaccacg
cgggtgcccactcctcggcccagggacgggcatctacgtctggtcaatggagcccaccga
tgcgagggacgtgtagagctctacctagggcaacggtggggcactgtctgtgatgatgct
tgggacctgcgggcagccggtgtcctgtgccgccagctgggctgtggccaggccctcgca
gcccctggcgaggctcactttggcccaggccgaggccccattctcctggacaatgtcaag
tgccgtggggaagaaagtgctctgctgctctgctctcatatccgctgggatgcccacaac
tgtgaccacagcgaggatgccagtgtcctgtgccagccttcatga