GENSCAN 1.0	Date run:  5-Nov-116	Time: 20:00:55

Sequence gi568815587f:70103460_70306470 : 203011 bp : 51.25% C+G : Isochore 3 (51 - 57 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    540    691  152  2  2   99   84   111 0.982  11.27
 1.02 Intr +   2206   2329  124  1  1   40   87    80 0.526   4.19
 1.03 Intr +   4894   4945   52  0  1  105   94    57 0.996   6.97
 1.04 Intr +   5219   5398  180  0  0   25   92    76 0.796   2.06
 1.05 Intr +   7667   7732   66  0  0   50  115    26 0.643   0.87
 1.06 Intr +   8248   8303   56  2  2  114   95    57 0.553   8.19
 1.07 Intr +  12999  13040   42  2  0   92  106    71 0.945   8.22
 1.08 Intr +  20891  20955   65  1  2  124  110   103 0.998  14.11
 1.09 Intr +  22602  22736  135  0  0   79   96   217 0.895  21.79
 1.10 Intr +  27232  27329   98  1  2   61   46    94 0.292   2.65
 1.11 Intr +  28234  28429  196  2  1   -1   57   116 0.506  -1.41
 1.12 Intr +  28460  28620  161  2  2   84   86   136 0.775  13.14
 1.13 Intr +  39367  39512  146  2  2  122   20    47 0.054   1.81
 1.14 Intr +  44258  44390  133  1  1   87   18    56 0.223  -0.78
 1.15 Intr +  46251  46333   83  1  2   79   78   221 0.645  20.05
 1.16 Intr +  49598  49669   72  1  0  101   64    50 0.314   4.00
 1.17 Intr +  53488  53562   75  0  0   89  115    41 0.969   7.11
 1.18 Intr +  57702  57903  202  2  1   96  109   401 0.999  42.38
 1.19 Intr +  58163  58274  112  0  1   93   70   121 0.999  10.74
 1.20 Intr +  59824  59881   58  1  1  109   76    74 0.963   7.68
 1.21 Intr +  62011  62111  101  0  2   90   86   147 0.900  14.11
 1.22 Intr +  63281  63361   81  2  0   88   38    77 0.780   1.95
 1.23 Intr +  63783  63928  146  0  2  102   61   342 0.994  33.34
 1.24 Intr +  67428  67580  153  1  0   51  109   271 0.907  26.06
 1.25 Intr +  76545  76705  161  1  2  126   16   143 0.398  11.12
 1.26 Intr +  78420  78461   42  2  0   50  110    45 0.518   1.82
 1.27 Intr +  79043  79227  185  1  2   85   84   447 0.829  43.10
 1.28 Intr +  82131  82236  106  0  1  103   80   270 0.978  28.42
 1.29 Term +  84279  84545  267  2  0  103   37   531 0.999  45.33
 1.30 PlyA +  85562  85567    6                               1.05

 2.00 Prom +  86566  86605   40                              -0.81
 2.01 Init + 100001 100286  286  1  1  106   86   586 0.951  55.44
 2.02 Term + 102674 103014  341  0  2  115   45   355 0.556  28.95
 2.03 PlyA + 106358 106363    6                               1.05

 3.00 Prom + 111514 111553   40                              -2.11
 3.01 Init + 113203 113271   69  0  0   68   56    39 0.007  -0.28
 3.02 Intr + 114086 114196  111  1  0   18  109    81 0.010   4.28
 3.03 Intr + 123773 123849   77  1  2  100   83    51 0.776   4.61
 3.04 Term + 126816 126927  112  0  1  125   44    32 0.672   0.83
 3.05 PlyA + 127056 127061    6                               1.05

 4.04 PlyA - 127133 127128    6                               1.05
 4.03 Term - 127421 127362   60  2  0   72   38    41 0.062  -4.40
 4.02 Intr - 132976 132876  101  2  2   45  110   100 0.407   8.23
 4.01 Init - 138485 138467   19  2  1   41  106    12 0.132  -1.50
 4.00 Prom - 139076 139037   40                              -0.91

 5.03 PlyA - 139105 139100    6                               1.05
 5.02 Term - 140850 140635  216  0  0   71   47    98 0.285   1.47
 5.01 Init - 148899 148771  129  0  0   84   59    80 0.406   4.81
 5.00 Prom - 156417 156378   40                              -0.11

 6.00 Prom + 163188 163227   40                              -0.81
 6.01 Init + 163882 163897   16  0  1   82   26    17 0.184  -4.57
 6.02 Intr + 167095 167455  361  2  1   64  116   208 0.555  16.04
 6.03 Intr + 167678 167860  183  2  0    8   85   116 0.639   2.72
 6.04 Intr + 168162 168312  151  0  1   69   -4    56 0.744  -4.82
 6.05 Intr + 168714 168977  264  2  0   62   80   234 0.611  18.25
 6.06 Term + 170572 170640   69  0  0   52   53    53 0.513  -3.57
 6.07 PlyA + 172895 172900    6                              -0.45

 7.03 PlyA - 173730 173725    6                               1.05
 7.02 Term - 175720 175453  268  0  1   12   43   283 0.897  11.50
 7.01 Init - 182670 182660   11  0  2   76  110    16 0.521   1.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 113203 113242   40  0  1   68   91    55 0.915   4.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587f:70103460_70306470|GENSCAN_predicted_peptide_1|1149_aa
MYHINETRGLLKKINSVLQKITDPIQPKVAEHRPQTMKRLSYPFSREKQHLALKPRELPA
LVNCVLFPSRYFHRFDLSDKDSFFDSKTRSTIVYEILKRTTCTKAKYSMGWKQTSVRDDR
GIPGPLLTLTVQWEVIGVPAGAASPCGCSGPLKAQLGLLKAAPPDQAPPGQGEGRKKDSA
LLSKRRKCGKYGITSLLANGVYAAAYPLHDGDYNGENVEFNDRKLLYEEWARYGVFYKYQ
PIDLVRKYFGEKIGLYFAWLGVYTQMLIPASIVGIIVFLYGCATMDENIPSSWDLAPGSP
VLSKAEACTERDPSSLAGPPGFPRLVQQHGSHACEAALDGKEGQGMAKHPAYVHYGMDLR
DPRQPPAWAQRFLPGQLGTQEVLHHGPTSMEMCDQRHNITMCPLCDKTCSYWKMSSACAT
ARASHLFDNPATVFFSVFMALWGGKGRDRKPVLCCLLFQGYESHHEDPTLMTSAKPDQPP
KAPSSNTITWGTLTSPGKPFLRDPSFFWAAPISGSSIGAEHLLLSCHPETDASSCSATFM
EHWKRKQMRLNYRWDLTGFEEEEDHPRAEYEARVLEKSLKKESRNKETDKVKLTWRDRFP
AYLTNLVSIIFMIAVTFAIVLGVIIYRISMAAALAMNSSPSVRSNIRVTVTATAVIINLV
VIILLDEVYGCIARWLTKIEVPKTEKSFEERLIFKAFLLKFVNSYTPIFYVAFFKGRFVG
RPGDYVYIFRSFRMEECAPGGCLMELCIQLSIIMLGKQLIQNNLFEIGIPQQSHDTCPLP
FGERAEEIIDKEMMANKKMKKLIRYLKLKQQSPPDHEECVKRKQRYEVDYNLEPFAGLTP
EYMEMIIQFGFVTLFVASFPLAPLFALLNNIIEIRLDAKKFVTELRRPVAVRAKDIGIWY
NILRGIGKLAVIINVSDIRDLGRMEVPAELPGGRGPVEKELGMGLLPLAMTALEGEDCHG
PILQAFVISFTSDFIPRLVYLYMYSKNGTMHGFVNHTLSSFNVSDFQNGTAPNDPLDLGY
EVQICRYKDYREPPWSENKYDISKDFWAVLAARLAFVIVFQNLVMFMSDFVDWVIPDIPK
DISQQIHKEKVLMVELFMREEQDKQQLLETWMEKERQKDEPPCNHHNTKACPDSLGSPAP
SHAYHGGVL

>gi568815587f:70103460_70306470|GENSCAN_predicted_CDS_1|3450_bp
atgtaccacattaatgagacccgtggcctcctgaaaaaaatcaactctgtgctccagaaa
atcacagatcccatccagcccaaagtggctgagcacaggccccagaccatgaagagactc
tcctatcccttctcccgggagaagcagcatctggccttgaaacccagagaactgccagct
ctggtgaactgtgtcttgtttccttcccgatatttccacagatttgacttgtctgataag
gattcctttttcgacagcaaaacccggagcacgattgtctatgagatcttgaagagaacg
acgtgtacaaaggccaagtacagcatgggctggaaacagaccagtgttagggatgaccgg
gggattcctggccctctcttgaccctcacggtccagtgggaagtaattggggttccagcc
ggggcggcatctccatgtggctgttccggacccttaaaagcacagctgggcttgctgaaa
gcagcgccccctgaccaggcaccaccagggcaaggcgagggaagaaagaaggactccgcc
cttctaagtaaaaggcggaaatgtgggaagtatggcatcacgagcctgctggccaatggt
gtgtacgcggctgcatacccactgcacgatggagactacaacggtgaaaacgtcgagttc
aacgacagaaaactcctgtacgaagagtgggcacgctatggagttttctataagtaccag
cccatcgacctggtcaggaagtattttggggagaagatcggcctgtacttcgcctggctg
ggcgtgtacacccagatgctcatccctgcctccatcgtgggaatcattgtcttcctgtac
ggatgcgccaccatggatgaaaacatccccagtagttgggatctggccccaggctcacct
gtgctcagcaaagcagaagcctgcactgagcgggacccatcatccctggcaggccccccc
ggcttcccgaggctggtgcaacagcatgggtcacacgcctgtgaagctgccctggatggc
aaggagggacagggcatggctaagcacccggcttatgtccactatggcatggacctgagg
gaccctcgccaacccccagcttgggcccagcgctttctcccaggccagctcggcacccag
gaggtgctccatcatggcccaacaagcatggagatgtgtgaccagagacacaatatcacc
atgtgcccgctttgcgacaagacctgcagctactggaagatgagctcagcctgcgccacg
gcccgcgccagccacctcttcgacaaccccgccacggtcttcttctctgtcttcatggcc
ctctggggtggcaaagggagagacaggaagcccgttctctgttgtctcctcttccaaggg
tacgaatcccatcacgaggaccccaccctcatgacctcagctaaacccgatcaaccccca
aaggccccatcttcaaataccatcacctgggggactctgacttcccctgggaagcccttc
ctccgtgatcccagcttcttctgggcagctccaatttctggctccagcattggcgctgag
cacctcctactgtcctgccatcctgaaacggatgccagctcctgctctgccaccttcatg
gagcactggaagcggaaacagatgcgactcaactaccgctgggacctcacgggctttgaa
gaggaagaggatcatcctagagctgaatacgaagccagagtcttggagaagtctctgaag
aaagagtccagaaacaaagagactgacaaagtgaagctgacatggagagatcggttccca
gcctacctcactaacttggtctccatcatcttcatgattgcagtgacgtttgccatcgtc
ctcggcgtcatcatctacagaatctccatggccgccgccttggccatgaactcctccccc
tccgtgcggtccaacatccgggtcacagtcacagccaccgcagtcatcatcaacctagtg
gtcatcatcctcctggacgaggtgtatggctgcatagcccgatggctcaccaagatcgag
gtcccaaagacggagaaaagctttgaggagaggctgatcttcaaggctttcctgctgaag
tttgtgaattcctacacccccatcttttacgtggcgttcttcaaaggccggtttgttgga
cgcccgggcgactacgtgtacattttccgttccttccgaatggaagagtgtgcgccaggg
ggctgcctgatggagctatgcatccagctcagcatcatcatgctggggaaacagctgatc
cagaacaacctgttcgagatcggcatcccccagcaaagccatgacacttgccccctgcct
tttggggaaagggcagaagagatcatcgacaaagaaatgatggcaaacaagaagatgaag
aagctcatccgctacctgaagctgaagcagcagagcccccctgaccacgaggagtgtgtg
aagaggaaacagcggtacgaggtggattacaacctggagcccttcgcgggcctcacccca
gagtacatggaaatgatcatccagtttggcttcgtcaccctgtttgtcgcctccttcccc
ctggccccactgtttgcgctgctgaacaacatcatcgagatccgcctggacgccaaaaag
tttgtcactgagctccgaaggccggtagctgtcagagccaaagacatcggaatctggtac
aatatcctcagaggcattgggaagcttgctgtcatcatcaatgtaagtgacatcagggac
cttggcagaatggaagtcccggctgaactgccaggtggccggggccctgtggagaaggag
ctgggcatgggtcttctgcctctagccatgacagcccttgaaggcgaggactgccatggc
cccatcttacaggccttcgtgatctccttcacgtctgacttcatcccgcgcctggtgtac
ctctacatgtacagtaagaacgggaccatgcacggcttcgtcaaccacaccctctcctcc
ttcaacgtcagtgacttccagaacggcacggcccccaatgaccccctggacctgggctac
gaggtgcagatctgcaggtataaagactaccgagagccgccgtggtcggaaaacaagtac
gacatctccaaggacttctgggccgtcctggcagcccggctggcgtttgtcatcgtcttc
cagaacctggtcatgttcatgagcgactttgtggactgggtcatcccggacatccccaag
gacatcagccagcagatccacaaggagaaggtgctcatggtggagctgttcatgcgggag
gagcaagacaagcagcagctgctggaaacctggatggagaaggagcggcagaaggacgag
ccgccgtgcaaccaccacaacaccaaagcctgcccagacagcctcggcagcccagccccc
agccatgcctaccacgggggcgtcctgtag

>gi568815587f:70103460_70306470|GENSCAN_predicted_peptide_2|208_aa
MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT
ELLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLK
VSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEV
QQARDLQNRSGAMSPMSWNSDASTSEAS

>gi568815587f:70103460_70306470|GENSCAN_predicted_CDS_2|627_bp
atggacccgttcctggtgctgctgcactcggtgtcgtccagcctgtcgagcagcgagctg
accgagctcaagttcctatgcctcgggcgcgtgggcaagcgcaagctggagcgcgtgcag
agcggcctagacctcttctccatgctgctggagcagaacgacctggagcccgggcacacc
gagctcctgcgcgagctgctcgcctccctgcggcgccacgacctgctgcggcgcgtcgac
gacttcgaggcgggggcggcggccggggccgcgcctggggaagaagacctgtgtgcagca
tttaacgtcatatgtgataatgtggggaaagattggagaaggctggctcgtcagctcaaa
gtctcagacaccaagatcgacagcatcgaggacagatacccccgcaacctgacagagcgt
gtgcgggagtcactgagaatctggaagaacacagagaaggagaacgcaacagtggcccac
ctggtgggggctctcaggtcctgccagatgaacctggtggctgacctggtacaagaggtt
cagcaggcccgtgacctccagaacaggagtggggccatgtccccgatgtcatggaactca
gacgcatctacctccgaagcgtcctga

>gi568815587f:70103460_70306470|GENSCAN_predicted_peptide_3|122_aa
MGAVCEALQQYSPGNLLSLMGVRASKAIGSASLQLLSQEDLGRSQTALGQSSRGSGSGCQ
TWIPEGTQCVSRGSGWSAGELNAQKRTFIPLQYTDATENLKFDLAFSFDLPTQVLSPIKS
CF

>gi568815587f:70103460_70306470|GENSCAN_predicted_CDS_3|369_bp
atgggggctgtctgtgaagccttgcagcagtacagcccaggtaatttgctgagcctaatg
ggtgtcagggcttccaaggcgatcggcagtgccagtcttcagctgctaagccaagaagat
ctgggaaggagtcagacggccttgggccagagttccaggggctctggaagtggctgccag
acttggatccccgagggcacacagtgtgtttcccggggaagtgggtggtctgctggtgaa
ctgaatgcccagaagaggacatttattccattacagtataccgatgccacagagaacctc
aaatttgacctcgctttctcttttgatctgccaacacaggtcctaagtccaatcaagagc
tgcttttga

>gi568815587f:70103460_70306470|GENSCAN_predicted_peptide_4|59_aa
MSDGWVGCDLHRGGIGREGTDVDSQPAMTAVVTTEIPYGQGATPMLITKPVKWDKQNLP

>gi568815587f:70103460_70306470|GENSCAN_predicted_CDS_4|180_bp
atgagtgatggctgggtggggtgcgacttgcaccgaggagggataggaagagaagggaca
gatgtggacagccaacctgcaatgacagctgtggtcaccacagagatcccttatgggcag
ggggcaacccccatgctaatcaccaaacctgtcaaatgggacaagcagaaccttccttaa

>gi568815587f:70103460_70306470|GENSCAN_predicted_peptide_5|114_aa
MTAHNVARMDGGHHIVPLAQYSENPLAVIQNKGEMRPVSWAVEPQEANTALTVSRYHLLS
FPPDSQTIPHTRPFQNPLSPEICSLSRIPHAKDCTTGCPNQNPVIARILPALHP

>gi568815587f:70103460_70306470|GENSCAN_predicted_CDS_5|345_bp
atgactgctcacaatgtggccaggatggatggaggacatcatattgttcctctagcccag
tattctgagaacccgctggctgtgattcagaataaaggagaaatgaggcctgtttcttgg
gcagtggagccccaggaagctaacacagccctcactgtatctcgctaccatctcctgagc
ttcccacctgacagccagacaattcctcacactcggcccttccaaaacccactctcccct
gagatctgttccctctccagaattcctcatgccaaggattgcaccactggctgcccaaac
cagaacccggtcatcgcccggatcctccctgccctccacccctga

>gi568815587f:70103460_70306470|GENSCAN_predicted_peptide_6|347_aa
MVVCAANQCPGAASRPLLRRQRLRTRAKVLLGPRPRGGADARADALDVGHVDAGAAQPGP
LLLRSASVRPRAGLSDWGGGPRGRGVGRAGGRRPRAAFVGSQALPERAAAREPPRSLLAR
SRRRASPAPRDPGAGARGGDLWPLKALARAGSVVNGPHPPGFGASAAPDTGGEECGSSRL
EVTIPISAHQIQPKNSGSRQFFPGADCTHSCKMPDGFCTCQFCWLYAPSVLFLKNDWMMC
EVMPTISEAEGPPGGGGGHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLAL
TQGKLHEVGHERDSLQRQLNTALPQCSSLGMPSSVDNMMMPTVHVTT

>gi568815587f:70103460_70306470|GENSCAN_predicted_CDS_6|1044_bp
atggtggtctgcgctgccaatcagtgccccggggccgcctcccgccccctcctgaggaga
cagcgcttgcgtactcgggccaaggtgctcctcgggccccgcccccggggcggtgctgac
gctcgcgccgacgcgctcgacgtcgggcacgtagacgccggcgccgcgcagccgggcccg
ctcctcctccgctccgccagtgtccggccgcgggccggccttagtgactggggcggcggg
ccccggggccgcggcgtggggcgggcaggcggacgccggccgcgggctgctttcgtcggc
tcccaagctctcccggagcgagcagccgcccgcgagccgccgcggagcctcctcgcccgc
tcccgccggcgagcaagccccgcgccccgtgacccgggcgctggggcgaggggcggggac
ctgtggccgctgaaagccctggcccgagcgggctccgttgtcaacggtcctcaccccccg
gggttcggggcttccgccgcacctgatacaggaggggaggagtgcggctcgagcaggctg
gaggtcaccatccccatcagtgctcaccaaatccagcccaagaattcagggagccgtcag
ttcttcccgggagctgactgcacacattcctgcaagatgcctgatggattttgtacttgt
cagttttgctggttgtatgctccttctgtgcttttcctgaaaaatgattggatgatgtgc
gaggtgatgccgaccatcagcgaagcagaaggcccccctggaggaggtggaggccatggt
tccggctccccttcacagccagatgcagattcacattttgaacagttgatggtctccatg
ctagaagaaagggaccgccttcttgatacactgagagagactcaagaaacgctggcctta
acccaggggaagttacacgaggttggtcatgaaagagattccttgcagagacagctcaac
acggcacttccacagtgtagcagcctgggaatgcctagttcagtggataacatgatgatg
ccaacggttcacgttaccacctga

>gi568815587f:70103460_70306470|GENSCAN_predicted_peptide_7|92_aa
MAVRTISPGRVGATAAVNSTAILEYLTAEVLELARNASKDFTVKHTTPHYLQLAIRGDKE
LGSLFKSTIAGKGVIPHIHKSLIGKKGQQQTV

>gi568815587f:70103460_70306470|GENSCAN_predicted_CDS_7|279_bp
atggcagtcaggacaatcagtcctggacgtgtgggcgcgactgccgctgtgaatagcaca
gccatcctggagtacctcaccgcagaggtacttgaactggcaagaaatgcgtcaaaagac
ttcacagtaaagcatactacccctcattacttgcaacttgccattcgtggagataaagaa
ttgggctctctcttcaagtctacaattgctggtaaaggtgtcattccacacatccacaaa
tctctaattgggaagaaaggacaacagcagactgtctaa