GENSCAN 1.0	Date run:  8-Nov-116	Time: 04:51:38

Sequence gi568815597f:150224943_150452976 : 228034 bp : 44.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 Intr -   1853   1666  188  0  2   48   68   355 0.131  28.91
 1.04 Intr -   4295   4130  166  2  1   58   51   143 0.983   7.13
 1.03 Intr -   5751   5629  123  0  0   25  119    40 0.749   1.58
 1.02 Intr -   6984   6835  150  0  0   92  106    76 0.999  10.16
 1.01 Init -  10844  10791   54  2  0   93   78    79 0.952   8.68
 1.00 Prom -  26376  26337   40                              -4.36

 2.00 Prom +  32796  32835   40                              -4.26
 2.01 Init +  33187  33241   55  0  1   53   61    99 0.932   3.22
 2.02 Intr +  36517  36696  180  2  0   57   98   182 0.867  15.94
 2.03 Intr +  37216  37358  143  2  2   99   66    25 0.998   1.47
 2.04 Intr +  37583  37678   96  1  0  114   78    46 0.988   6.41
 2.05 Intr +  37862  37928   67  1  1  146  105     1 0.979   6.08
 2.06 Intr +  38100  38257  158  1  2   36  111   111 0.966   7.93
 2.07 Intr +  38357  38477  121  1  1   96   55    86 0.987   6.17
 2.08 Intr +  38717  38737   21  0  0  101  115    17 0.802   3.22
 2.09 Term +  40043  40071   29  0  2  103   43    23 0.294  -2.46
 2.10 PlyA +  40116  40121    6                              -1.75

 3.08 PlyA -  40480  40475    6                               1.05
 3.07 Term -  41252  41188   65  0  2  116   55    92 0.992   6.75
 3.06 Intr -  41714  41591  124  2  1  101   47   118 0.995   9.16
 3.05 Intr -  42260  42133  128  0  2   97  105    50 0.996   8.00
 3.04 Intr -  42536  42414  123  0  0   83  110    44 0.985   6.66
 3.03 Intr -  42847  42774   74  0  2  100   89    37 0.999   4.05
 3.02 Intr -  43185  43015  171  2  0   99   60   206 0.999  17.96
 3.01 Init -  43868  43756  113  2  2  100   96   155 0.954  15.39
 3.00 Prom -  46351  46312   40                             -10.74

 4.00 Prom +  46735  46774   40                              -4.36
 4.01 Init +  47876  47921   46  1  1   69  106    72 0.964   6.29
 4.02 Intr +  49145  49228   84  0  0  128  101    57 0.995  10.79
 4.03 Intr +  54776  54799   24  0  0   97  116    -2 0.166   1.50
 4.04 Intr +  58396  58691  296  2  2  114  116    68 0.532   8.93
 4.05 Intr +  58863  58938   76  2  1   83   74    51 0.991   2.29
 4.06 Intr +  59484  59562   79  1  1  131   98    52 0.995   9.11
 4.07 Intr +  59655  59766  112  0  1   52  116    21 0.788   1.68
 4.08 Term +  61488  62012  525  2  0  104   41   101 0.614   1.26
 4.09 PlyA +  66396  66401    6                               1.05

 5.00 Prom +  66421  66460   40                              -7.76
 5.01 Init +  69425  69507   83  1  2   65   93    98 0.736   8.44
 5.02 Term +  83106  83286  181  0  1   91   54   228 0.975  16.78
 5.03 PlyA +  83382  83387    6                               1.05

 6.00 Prom +  87278  87317   40                              -8.36
 6.01 Init + 100001 100145  145  1  1   65   96   132 0.997  11.98
 6.02 Intr + 100809 100939  131  1  2   90  100    84 0.989  10.21
 6.03 Intr + 103378 103524  147  0  0   74   92   141 0.975  13.53
 6.04 Intr + 108037 108257  221  0  2  116   86   252 0.995  24.90
 6.05 Intr + 109993 110299  307  1  1   73   65   297 0.994  22.35
 6.06 Intr + 113218 113384  167  0  2   81   65   158 0.858  11.56
 6.07 Intr + 115456 115535   80  1  2   46   95    29 0.981  -1.41
 6.08 Intr + 118367 118510  144  0  0   47   52    77 0.535   0.25
 6.09 Intr + 119220 119319  100  1  1   99  100    56 0.989   7.07
 6.10 Intr + 119492 119605  114  2  0   76   82    47 0.845   2.46
 6.11 Intr + 121076 121194  119  2  2   64   84   168 0.999  14.11
 6.12 Intr + 121466 121592  127  0  1   98   59    98 0.105   7.64
 6.13 Intr + 139625 139800  176  2  2   77   64   116 0.003   7.68
 6.14 Intr + 139834 139977  144  2  0   88   76    93 0.012   8.35
 6.15 Intr + 185014 185163  150  2  0   33   89    56 0.102   0.33
 6.16 Intr + 192654 192783  130  1  1   98  100    68 0.480   8.75
 6.17 Intr + 215981 216081  101  2  2  101   80    -6 0.085  -0.35
 6.18 Intr + 218289 218341   53  1  2   75   91    49 0.841   2.53
 6.19 Intr + 219315 219435  121  2  1   64   90    68 0.656   4.67
 6.20 Intr + 221284 221459  176  2  2   62  101   186 0.974  16.96
 6.21 Term + 225043 225054   12  0  0  115   36     8 0.586  -3.50
 6.22 PlyA + 227433 227438    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -   1853   1624  230  0  2   48   48   358 0.864  24.59
S.002 Term -  96636  96524  113  1  2   45   47   164 0.813   6.72
S.003 Intr + 121466 121549   84  0  0   98   23    97 0.838   3.99
S.004 Intr + 124215 124276   62  1  2   47   92    63 0.905   1.05
S.005 Term + 127891 128037  147  0  0   82   53   113 0.957   5.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:150224943_150452976|GENSCAN_predicted_peptide_1|227_aa
MEMKKKINLELRNRSPEEVTELVLDNCLCVNGEIEGLNDTFKELEFLSMANVELSSLARL
PSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDL
FNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDEDGDEDDEEEEENEAGP
PEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQ

>gi568815597f:150224943_150452976|GENSCAN_predicted_CDS_1|681_bp
atggagatgaagaagaagattaacctggagttaaggaacagatccccggaggaggtgaca
gagttagtccttgataattgcctgtgtgtcaatggggaaattgaaggcctgaatgatact
ttcaaagaactagaatttctgagtatggctaatgtggaactaagttcgctggcccggctt
cccagcttaaataaacttcgaaaattggagcttagtgataatataatttctggaggcttg
gaagtcctggcagagaaatgtccaaatcttacctacctcaatctgagtggaaacaaaata
aaagatctcagtacagtagaagctctgcaaaatcttaaaaatttgaaaagtcttgacctg
tttaactgtgagatcacaaacctggaagattatagagaaagtatttttgaactactgcag
caaatcacatacttagatggatttgatcaggaggataatgaagcgccggactctgaagag
gaggatgatgaggatggcgatgaagatgatgaagaggaagaggaaaatgaagctggtcca
ccggaaggatatgaggaagaggaggaggaagaggaagaggaggatgaggatgaggatgaa
gatgaagatgaagcaggttcagagttgggagagggagaagaggaagtgggcctctcatac
ttaatgaaagaagaaattcag

>gi568815597f:150224943_150452976|GENSCAN_predicted_peptide_2|289_aa
MLFSALLLEVIWILAADGGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPH
GYDQPGTEPLDLHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINS
EATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHK
DQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGT
LFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSSYTTDILRDLSLG

>gi568815597f:150224943_150452976|GENSCAN_predicted_CDS_2|870_bp
atgttgttctccgccctcctgctggaggtgatttggatcctggctgcagatgggggccca
catggtcaggaccattggccagcctcttaccctgagtgtggaaacaatgcccagtcgccc
atcgatattcagacagacagtgtgacatttgaccctgatttgcctgctctgcagccccac
ggatatgaccagcctggcaccgagcctttggacctgcacaacaatggccacacagtgcaa
ctctctctgccctctaccctgtatctgggtggacttccccgaaaatatgtagctgcccag
ctccacctgcactggggtcagaaaggatccccaggggggtcagaacaccagatcaacagt
gaagccacatttgcagagctccacattgtacattatgactctgattcctatgacagcttg
agtgaggctgctgagaggcctcagggcctggctgtcctgggcatcctaattgaggtgggt
gagactaagaatatagcttatgaacacattctgagtcacttgcatgaagtcaggcataaa
gatcagaagacctcagtgcctcccttcaacctaagagagctgctccccaaacagctgggg
cagtacttccgctacaatggctcgctcacaactcccccttgctaccagagtgtgctctgg
acagttttttatagaaggtcccagatttcaatggaacagctggaaaagcttcaggggaca
ttgttctccacagaagaggagccctctaagcttctggtacagaactaccgagcccttcag
cctctcaatcagcgcatggtctttgcttctttcatccaagcaggatcctcgtataccaca
gatatactgcgggatctctccttaggataa

>gi568815597f:150224943_150452976|GENSCAN_predicted_peptide_3|265_aa
MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT
DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSPISIRQMAYV
SGLSFGIISGVFSVINILADALGPGVVGIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFD
ACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTVSMGLWAFITAGGSLRSIQ
RSLLCRRQEDSRVMVYSALRIPPED

>gi568815597f:150224943_150452976|GENSCAN_predicted_CDS_3|798_bp
atgggggctgcggtgtttttcggctgcactttcgtcgcgttcggcccggccttcgcgctt
ttcttgatcactgtggctggggacccgcttcgcgttatcatcctggtcgcaggggcattt
ttctggctggtctccctgctcctggcctctgtggtctggttcatcttggtccatgtgacc
gaccggtcagatgcccggctccagtacggcctcctgatttttggtgctgctgtctctgtc
cttctacaggaggtgttccgctttgcctactacaagctgcttaagaaggcagatgagggg
ttagcatcgctgagtgaggacggaagatcacccatctccatccgccagatggcctatgtt
tctggtctctccttcggtatcatcagtggtgtcttctctgttatcaatattttggctgat
gcacttgggccaggtgtggttgggatccatggagactcaccctattacttcctgacttca
gcctttctgacagcagccattatcctgctccataccttttggggagttgtgttctttgat
gcctgtgagaggagacggtactgggctttgggcctggtggttgggagtcacctactgaca
tcgggactgacattcctgaacccctggtatgaggccagcctgctgcccatctatgcagtc
actgtttccatggggctctgggccttcatcacagctggagggtccctccgaagtattcag
cgcagcctcttgtgccgacggcaggaggacagtcgggtgatggtgtattctgccctgcgc
atcccacccgaggactga

>gi568815597f:150224943_150452976|GENSCAN_predicted_peptide_4|413_aa
MDVLFVAIFAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYGGDVFHVEVNSDFGFPS
DSEREDKGAHGPRPDTVGQRGGSRPSPGPIRCRHRSKVSGNQHTPSHPKQRGSASPMAGS
GAKRSRDGELETSLNTQGCTTEGDLLFAQKCKELQGFIPPLTDLLNGLKMGRFERGLSSF
QQSVAMDRIQRIVGVLQKPQMGERYLGTLLQVEGMLKTWFPQIAAQKSSLGGGKHQLTKH
FPSHHSDSAASSPASPMEKMDQTQLGHLALKPKQPWHLTQWPAMNLTWIHTTPICNPPLS
SPGTISFSHGPLGTGTGIGVILFLQHGVQPFTHSAPTTPVPPTTASPVIPGEPMKLSGEG
PRCYSLPVTLPSDWSYTLSPPSLPTLARKMTIGHREQQRSHPPVAADAHLLNL

>gi568815597f:150224943_150452976|GENSCAN_predicted_CDS_4|1242_bp
atggatgtcctctttgtagccatctttgctgtgccacttatcctgggacaagaatatgag
gatgaagaaagactgggagaggatgaatattatcaggtggtctattattatacagtcacc
cccagttatggtggggatgtatttcatgtagaagtgaacagtgactttggcttcccctct
gatagtgagagggaggacaagggggcccatgggcccaggccagacactgttgggcagagg
ggaggttcacggcccagcccgggtcctatccgctgcaggcatcgatcgaaggtttccggt
aaccagcatacaccatctcatccgaaacagcggggttcggcttctcctatggcaggatct
ggggcgaaaagatcaagagatggtgaactggagaccagtctaaacacccaaggttgtacc
acagagggagacctgctgtttgcccagaagtgtaaagaactccaaggatttatacctcct
ctcacagacctactcaatgggctgaagatgggtcgttttgagagaggattaagcagtttt
cagcagagtgtggcaatggacaggatccagcgtattgtaggtgttttgcagaagccacag
atgggggaacgttacctaggaaccttgctacaggtagaagggatgttaaagacttggttt
ccacaaatagctgcccagaagtcatcattgggtggtggcaagcatcagctgaccaagcat
tttccaagccaccacagtgattcagctgcttcctctcctgcatctcctatggaaaagatg
gaccagacacagctaggacatctagctttaaaaccaaagcagccttggcacctcacacaa
tggccagctatgaacctcacctggatccacaccactccaatttgcaacccccctctcagc
tccccaggtactatctcctttagccatggtcctttaggcactggaaccggcattggcgtc
attcttttcctccagcatggagtgcaacccttcacccactctgccccaaccaccccagtc
ccacctactacagcatctcctgtcatccctggtgagcctatgaaactatctggagagggt
cctcgttgctacagtttgccagtaactctgccatcagactggagctataccctatcccct
cccagtctacccaccttggccagaaagatgaccataggacaccgggagcagcagagaagc
catcctccagttgctgctgatgctcatcttctcaacctctag

>gi568815597f:150224943_150452976|GENSCAN_predicted_peptide_5|87_aa
MAKHLKFIARTVMVQEGNVESAYRTLNRILTMDGLIEDIKHRRYYEKPCCRRQRESYERC
RRIYNMEMARKINFLMRKNRADPWQGC

>gi568815597f:150224943_150452976|GENSCAN_predicted_CDS_5|264_bp
atggcaaaacatctgaagttcatcgccaggactgtgatggtacaggaagggaacgtggaa
agcgcatacaggaccctaaacagaatcctcactatggatgggctcattgaggacattaag
catcggcggtattatgagaagccatgctgccggcgacagagggaaagctatgaaaggtgc
cggcggatctacaacatggaaatggctcgcaagatcaacttcttgatgcgaaagaatcgg
gcagatccgtggcagggctgctga

>gi568815597f:150224943_150452976|GENSCAN_predicted_peptide_6|954_aa
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQPKTPSSSQPERLPIGNTIQPSQAATFMNDAIEKARKAAE
LQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELKDQTKPTPLILDEQGRTVDAT
GKEIELTHRMPTLKANIRAVKREQFKQQLKEKPSEDMESNTFFDPRVSIAPSQRQRRTFK
FHDKGKFEKIAQRLRTKAQLEKLQAEISQAARKTGIHTSTRLALIAPKKELKEGDIPEIE
WWDSYIIPNGFDLTEENPKREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKL
RRQTRREAQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQ
KAHEEANAARKLTAEQRKVKKIKKLKEDISQGVHISVYRVRNLSNPAKKFKIEANAGQLY
LTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLHRIKWDEQTSNTKGDGEWGLEGIKGESYG
RRAQRVHHPHPLASLPTYGFHALAVIVLPAPAAAAAAAARGAAALVQTGKMAAGGGGGSR
ALESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRFLSKVVRNIFTEK
GTFEQDLKVVIERAMRKTGEESSRTVSLTDREARTHPAAYPHRLNLFYLANDVIQNCKRK
NAIIFRESFADVLPEAAALVKDPSVSKSVERIFKIWEDRNVYPEEMIVALREALTSTNPK
AALKSKIVAEFRALIEELLLYKRSEDQIELKEKQLSTMRVDVCSTETLKCLKDKTGGKKF
SKEFEEASSKLEEFVNGLDKQVKNGPSLTEALENAGIFYEAQYKEVKVVANIFY

>gi568815597f:150224943_150452976|GENSCAN_predicted_CDS_6|2865_bp
atggcactgtcaaagagggagctggatgagctgaaaccatggatagagaagacagtgaag
agggtcctgggtttctcagagcctacggtggtcacagcagcattgaactgtgtggggaag
ggcatggacaagaagaaggcagccgatcatctgaaaccttttcttgatgattctactctc
cgatttgtggacaaactgtttgaggctgtggaggaaggccgaagctctaggcattccaag
tctagcagtgacaggagcagaaaacgagagctaaaggaggtgtttggtgatgactctgag
atctctaaagaatcatcaggagtaaagaagcgacgaataccccgttttgaggaggtggaa
gaagagccagaggtgatccctgggcctccatcagagagccctggcatgctgactaagctc
cagccaaagactccttcttcctcccaaccagaacgacttcctattggcaacactattcag
ccctcccaggctgccactttcatgaatgatgccattgagaaggcaaggaaagcagctgaa
ctgcaagctcgaatccaagcccagctggcactgaagccaggactcatcggcaatgccaac
atggtgggcctggctaatctccatgccatgggcattgctcccccgaaggtggagttaaaa
gaccaaacgaaacctacaccactgatcctggatgagcaagggcgcactgtagatgcaaca
ggcaaggagattgagctgacacaccgcatgcctactctgaaagccaatattcgtgctgtg
aagagggaacaattcaagcaacaactaaaggaaaagccatcagaagacatggaatccaat
accttttttgacccccgagtctccattgccccttcccagcgccagagacgcacttttaaa
ttccatgacaagggcaaatttgagaagattgctcagcgattacggacaaaggctcaactg
gagaagctacaggcagagatttcacaagcagctcgaaaaacaggcatccatacttcgact
aggcttgccctcattgctcctaagaaggagctaaaggaaggagatattcctgaaattgag
tggtgggactcttacataatccccaatggctttgatcttacagaggaaaatcccaagaga
gaagattattttggaatcacaaatcttgttgaacatccagcccagctcaatcctccagtt
gacaatgacacaccagttactctgggagtatatcttaccaagaaggaacagaaaaaactt
cggagacaaacaaggagggaagcacagaaggaactacaagaaaaagtcaggctgggcctg
atgcctcctccagaacccaaagtgagaatttctaatttgatgcgagtattaggaacagaa
gctgttcaagaccccacgaaggtagaagcccacgtcagagctcagatggcaaaaagacag
aaagcgcatgaagaggccaacgctgcccgaaaactcacagcagaacagagaaaggtcaag
aaaattaaaaagcttaaagaagacatttcacagggggtacacatatctgtatatagagtt
cgaaatttgagcaacccagccaagaagttcaagattgaagccaatgctgggcaactgtac
ctgacaggggtggtggtactgcacaaggatgtcaacgtggtagtagtggaagggggcccc
aaggcccagaagaaatttaagcgtcttatgctgcatcggataaagtgggatgaacagaca
tctaacacaaagggagatggtgaatgggggttagaggggattaagggggagagctatggg
agaagagcccagcgcgtgcaccatccccaccccctagcttccctccccacctacggcttt
cacgcactcgcagtgattgttttgcccgctcccgccgccgccgccgccgccgccgccaga
ggagcagcagcgcttgtgcaaaccgggaagatggcggccggcggcggcggaggcagcagg
gctctggagtcctcgttggatcgaaaattccagtcggtaaccaacaccatggagtccatt
caaggcttgtcgtcttggtgtatagagaacaaaaaacaccacagtactatcgtctatcat
tggatgaagtggctccggagatttttaagtaaggtagtcaggaacatattcactgagaaa
ggaacatttgagcaagatttaaaggtggtgattgaacgagccatgagaaaaacgggggaa
gaaagttccagaacagtgagcttaacagaccgtgaagcaaggactcacccagctgcatat
ccccaccgtttgaatctcttttaccttgccaatgatgtcatacagaactgtaaaaggaaa
aatgcaatcatattccgtgaatcatttgctgatgtacttcctgaagcagctgctctagtg
aaggatccatctgtctctaagtctgtagaacgaatctttaaaatctgggaagatagaaat
gtatacccagaagaaatgattgtggcattgagagaagctttgacatctacaaatccaaaa
gctgctctcaagtctaagatagttgctgaatttcgagccctaattgaagagctgttgcta
tacaagcgctcagaagatcagatagaactgaaggaaaagcagttgtcaactatgagggtg
gatgtgtgcagcacagaaactctcaaatgcttaaaagataaaacaggtgggaagaagttc
tccaaagaatttgaagaggcaagctccaagctggaagaatttgtgaatggattagataag
caggtgaaaaacggaccctcattaacagaagcactggaaaatgctggaattttctatgaa
gcacaatacaaagaagtaaaagtggtggctaatatattctactaa