GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:45:43

Sequence gi568815595r:107957477_108190908 : 233432 bp : 40.34% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1021   1016    6                               1.05
 1.03 Term -   5079   4681  399  0  0   50   28   315 0.779  15.83
 1.02 Intr -   7816   7734   83  2  2   57   62   107 0.747   3.44
 1.01 Init -  12418  12364   55  1  1   82   97    41 0.577   5.91
 1.00 Prom -  14850  14811   40                              -3.95

 2.00 Prom +  17177  17216   40                              -6.75
 2.01 Init +  18198  18290   93  2  0   77   15   112 0.254   3.23
 2.02 Intr +  24139  24279  141  0  0   48   78    97 0.778   4.33
 2.03 Intr +  24436  24741  306  0  0   66   71   195 0.670  11.32
 2.04 Intr +  26261  26426  166  1  1   58   68    87 0.468   2.31
 2.05 Intr +  30409  30482   74  2  2   17   98    66 0.226  -1.29
 2.06 Term +  31523  31639  117  1  0   86   37    81 0.309   0.36
 2.07 PlyA +  34357  34362    6                               1.05

 3.00 Prom +  46712  46751   40                              -2.85
 3.01 Init +  46895  47059  165  1  0   73   41    92 0.829   2.69
 3.02 Intr +  48699  48953  255  2  0   41   33   153 0.599   1.82
 3.03 Intr +  49017  49137  121  2  1   15   45   143 0.657   1.85
 3.04 Term +  51241  51335   95  2  2   34   49   170 0.794   4.71
 3.05 PlyA +  52244  52249    6                               1.05

 4.16 PlyA -  53188  53183    6                               1.05
 4.15 Term -  55845  55780   66  0  0  102   48    47 0.097  -0.94
 4.14 Intr -  57544  57408  137  2  2   85   86    84 0.060   7.27
 4.13 Intr -  76752  76457  296  2  2   75  116   169 0.718  14.13
 4.12 Intr -  81924  81765  160  1  1   38   38   142 0.101   2.32
 4.11 Intr -  92175  92143   33  1  0   60  115    31 0.117   0.28
 4.10 Intr - 100953 100861   93  1  0  123   94    67 0.996   9.82
 4.09 Intr - 103376 103269  108  0  0   81  110    96 0.873  10.44
 4.08 Intr - 113706 113617   90  1  0  119  106   -14 0.740   2.55
 4.07 Intr - 122868 122515  354  1  0  131   91   273 0.909  26.24
 4.06 Intr - 133551 133387  165  1  0  -13  101   189 0.312   9.11
 4.05 Intr - 134034 133941   94  0  1   21   14   119 0.313  -3.58
 4.04 Intr - 134335 134069  267  1  0   49   27   231 0.300   9.91
 4.03 Intr - 139714 139610  105  1  0   68   37   120 0.786   4.39
 4.02 Intr - 141229 141083  147  1  0   13   36   144 0.456   1.21
 4.01 Init - 142736 142659   78  2  0   73   36   137 0.684   8.11
 4.00 Prom - 144018 143979   40                              -6.25

 5.03 PlyA - 145335 145330    6                               1.05
 5.02 Term - 146580 146369  212  1  2   77   43   156 0.930   6.47
 5.01 Init - 146905 146836   70  1  1   88   84    84 0.258   9.26
 5.00 Prom - 152376 152337   40                              -2.45

 6.00 Prom + 160244 160283   40                              -7.15
 6.01 Init + 161055 161073   19  2  1   96   86     8 0.041   1.88
 6.02 Intr + 170073 170253  181  1  1   77   37   125 0.174   4.30
 6.03 Intr + 177832 177970  139  1  1   47  109    55 0.126   3.05
 6.04 Intr + 178838 178984  147  1  0  102   39   148 0.864  10.81
 6.05 Term + 193870 194130  261  0  0   34   45   180 0.180   2.84
 6.06 PlyA + 195429 195434    6                               1.05

 7.05 PlyA - 197391 197386    6                               1.05
 7.04 Term - 205179 205001  179  1  2   79   41   110 0.968   2.27
 7.03 Intr - 206253 206187   67  0  1   56  103   110 0.853   6.86
 7.02 Intr - 208017 207955   63  0  0   83   71    60 0.681   1.80
 7.01 Intr - 209509 209378  132  1  0   35   76   142 0.992   7.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:107957477_108190908|GENSCAN_predicted_peptide_1|178_aa
MGICLLLEISPCTDGAGPGQWISPQHPDATYDCGPNDDKSPNLVALVRIIMGKPKEASDT
TPSTLDNTLNQKQYCILEEMTEIRVHLEDQKDAGLEATPYPYLIDQSYIYKSHVASWYEF
LGNRQFYQVAAPIVAAVQIVVSLLEQVNTVSNTCCETDKKYTYWFLPAVLGTELLKPS

>gi568815595r:107957477_108190908|GENSCAN_predicted_CDS_1|537_bp
atgggaatctgccttcttctggaaatcagtccctgcactgatggagctggtccagggcag
tggatttccccacaacaccctgatgccacctatgactgtggcccaaatgatgataaaagt
ccaaaccttgttgctttggtaagaattataatgggaaagcccaaagaagcctctgatact
actccatcaactctggacaacacattaaatcaaaaacaatattgcatcctggaggaaatg
acagagattagagtccatcttgaagatcaaaaggatgcagggttagaagccacaccctat
ccctatttaattgaccagtcttacatctataaaagccatgtggcttcttggtatgaattt
ttgggcaaccgacaattctaccaagtagcagccccaattgtagctgctgtacaaattgtg
gtgtctttgctagagcaagttaacacggtgtctaatacatgctgtgaaactgataagaaa
tacacatattggtttctgccagcagtccttggcacagagctcctcaagccttcataa

>gi568815595r:107957477_108190908|GENSCAN_predicted_peptide_2|298_aa
MPQGLQMPKKGPLLRHHHIMATSQQLKDVAAPHPEALESVTSVVHKARDIGKGERKYPPQ
HTAKEQLCTAAVFPGTLEAFGQLPRTLSQQLLAHCSLTRPPLLLPRKSAGLCFPSPPPSH
SVPPQATGMPEWQMAAKRKVKKEGRTGGREPERKHSEEGVYVHYPNGCQVPVDKDFNCVW
PFLLITYGTGPNEADLVANLASAIEPAYLRKLLLNSTLLLLPGGNTAHPVHCRRLEKVSR
DLCLAKTLEDDGVALRLVIQAQLREGEAARKLCFPLHLGAALFASQTEKNRALYDIFT

>gi568815595r:107957477_108190908|GENSCAN_predicted_CDS_2|897_bp
atgcctcagggcctgcagatgccaaagaaaggaccactcctcaggcaccaccacatcatg
gcaacatctcagcagctcaaagacgtggcagctcctcatcctgaggcacttgaatctgtg
acctctgttgtacacaaagccagggatatagggaaaggggagaggaaatatcctcctcaa
cacactgcaaaagaacaactctgcactgctgctgtgtttcctggcacactggaggccttt
ggccaacttccccgaaccctgtctcagcagcttctggctcattgctcgctgacacggcca
cctctgctcctgccaaggaaatctgctggcctttgcttcccctccccacctccatctcac
tcagttcctcctcaggccacaggcatgcctgagtggcaaatggcagcaaagaggaaggtg
aaaaaggaaggaagaacgggaggaagggagcccgagagaaaacattcagaggagggagtt
tatgtacattatccaaatggatgtcaggtccctgtcgacaaagattttaattgtgtgtgg
ccctttctccttataacttatggaactggtccaaatgaggctgacttggtagccaatctg
gcatccgctattgaacctgcatacctaaggaagttactgcttaactcaactctcctgctt
ctgcctggagggaacactgcccatcctgtacactgccggaggctggaaaaggtgtcaaga
gatttgtgcctggccaagaccttggaggatgatggtgttgcacttcgtctagttattcag
gctcaactcagagaaggagaagctgcaagaaagctctgctttcccctgcatcttggggca
gccctgtttgcctcacagacagagaagaaccgagccctatatgatattttcacctaa

>gi568815595r:107957477_108190908|GENSCAN_predicted_peptide_3|211_aa
MSQNLDGAVREDPRPLSSVTPGEKPPFYSISFLAPASAESYFHSVKPCSHSPSPRRSLID
VVGVINSNLSPEIKEWRVRRIALTPLLILCCYMRLFGQAEAPHPQHRIWLQALDFLGHQD
KILSVEKKMIWGSGIYPEQGCKLEKAQERRVGAGFTPVPAMPLSGALPVRNSSVGQDAQE
CEKFSGAFQEDSGRGGSEGGFRRDRDPPIRY

>gi568815595r:107957477_108190908|GENSCAN_predicted_CDS_3|636_bp
atgagccagaatttggacggtgcggtcagagaagaccccaggccgctgagcagcgtgact
ccaggggaaaaaccacctttttactccatctcctttctggctcccgcatctgctgagagc
tacttccactcagtaaaaccttgcagtcattctccaagcccacgtagaagcctgatagat
gtggtcggagtgattaatagcaacctgtctccagagataaaagagtggcgagtgagacgc
attgccctgactccacttctaattctgtgttgttatatgcggctgtttggccaagcggag
gcaccacacccacagcaccgtatctggctgcaagccctggatttcctgggtcaccaagat
aagattctttcagtggaaaagaaaatgatctggggcagtggtatttacccagagcagggt
tgtaagctggagaaggcacaggaaaggcgtgttggtgcaggtttcacccctgttcctgca
atgccattatctggtgctctcccagtgagaaattcatcagtaggacaggatgcccaggaa
tgtgagaaattctctggagccttccaggaagattcgggaagaggtggcagtgaaggggga
tttcgcagggacagagacccccctattcgctattag

>gi568815595r:107957477_108190908|GENSCAN_predicted_peptide_4|730_aa
MREVAAPAAAVSVWERSNPGAVQDGLRRAHRNREDPVKTAAEPEVMQLKLRNAKGCQARK
EGFLGAFGESVALRISLRKGKQLSECLDFSLVRLETEKPAAPTGLLTYRTVTMFTTVNGT
CLINPDQRMKTLKNQVRKREENRIGKSRASRRAERRAREGRVEAPCGQVPDHRPALGVAA
SGSGTASALDGRVRRKRALPDVGSRERRGLGRDGTRPLKREGGSESKEEKTWAVGPACDA
RRRSVLPVTAAAAAAPDTCGGGGDPAAGAEMWPLVAALLLGSACCGSAQLLFNKTKSVEF
TFCNDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQ
LLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKYRVVSWFSPNENILIVIFPI
FAILLFWGQFGIKTLKYRSGGMDEKTIALLVAGLVITVIVIVGAILFVPAIGLTSFVIAI
LVIQVIAYILAVVGLSLCIAAFKESKGMMNDGVFTLRKAAFHGHSQVSALAHRHGHPRRA
GLWWVKCALRNLASNCLAQSNLPQRQRPEKRPSEGASTPAPASGRYEDPRKEIMLRKGDH
TSVQPAPAPWHALKTQGLNQGQRHSPPGCEDSKGSQLHEEGYPECQIWSNSARTLQNSVW
YVEALEPGRGLTPIFFTGEETPTIAPALPGTSIFSGAVPVWPRVDTLVKWPRTQAGSDAH
IGFSASPFNK

>gi568815595r:107957477_108190908|GENSCAN_predicted_CDS_4|2193_bp
atgagggaagttgcagctcctgcagcagcagttagcgtgtgggagcggtcaaacccaggg
gctgttcaagatggattaaggagagcacacagaaacagagaagaccctgtgaagacagcg
gcagagcctgaagtgatgcagctcaagttaaggaatgccaaaggctgccaggctaggaag
gaaggattcttaggagccttcggagagagcgtggccctcagaataagcctccggaaggga
aagcagctcagcgaatgccttgatttcagtcttgtgagacttgaaacagagaaaccagct
gcgcctactggacttctgacctacagaactgtaacaatgtttaccaccgtgaatggaact
tgtttgattaaccctgatcagaggatgaaaacactaaagaaccaagtgagaaagagggaa
gagaaccgcatagggaagagcagagcgagtagacgagccgaacgcagagcccgcgagggg
cgagtggaagctccctgcgggcaggtacccgaccaccgccctgccctgggcgtggcggcc
tcgggctcagggaccgcttcggcgctagacggccgcgtccggaggaaacgggcgctgccg
gacgtcgggtccagggagagacgcgggctggggcgggacgggacccggcccctgaagcgc
gagggtgggagtgaaagcaaagaggagaaaacctgggcagtgggtcctgcctgtgacgcg
cggcggcggtcggtcctgcctgtaacggcggcggcggctgctgctccggacacctgcggc
ggcggcggcgaccccgcggcgggcgcggagatgtggcccctggtagcggcgctgttgctg
ggctcggcgtgctgcggatcagctcagctactatttaataaaacaaaatctgtagaattc
acgttttgtaatgacactgtcgtcattccatgctttgttactaatatggaggcacaaaac
actactgaagtatacgtaaagtggaaatttaaaggaagagatatttacacctttgatgga
gctctaaacaagtccactgtccccactgactttagtagtgcaaaaattgaagtctcacaa
ttactaaaaggagatgcctctttgaagatggataagagtgatgctgtctcacacacagga
aactacacttgtgaagtaacagaattaaccagagaaggtgaaacgatcatcgagctaaaa
tatcgtgttgtttcatggttttctccaaatgaaaatattcttattgttattttcccaatt
tttgctatactcctgttctggggacagtttggtattaaaacacttaaatatagatccggt
ggtatggatgagaaaacaattgctttacttgttgctggactagtgatcactgtcattgtc
attgttggagccattcttttcgtcccagcgattggattaacctccttcgtcattgccata
ttggttattcaggtgatagcctatatcctcgctgtggttggactgagtctctgtattgcg
gcattcaaagaatcaaaaggaatgatgaatgatggtgtcttcacactgagaaaagcggcg
ttccacggtcacagccaggtgagtgcactcgcccatcggcatgggcatccgaggagagca
gggctgtggtgggtaaaatgcgctctgcgaaacctcgcctctaactgccttgctcaaagc
aacctgccacagaggcaaaggccagaaaagcgaccttcagaaggagccagcaccccagct
cctgcctcagggcgatatgaagaccccaggaaggaaattatgctgagaaaaggagatcac
acctctgtccagcctgcaccggccccttggcatgccctgaagacacaaggcctaaatcaa
ggtcaaagacacagccctcctggttgtgaagattccaaaggctcccagctgcatgaggag
ggttacccagaatgtcagatttggagcaattcagcgagaacccttcaaaattcagtgtgg
tatgtggaagctctagagcctggaagaggactcactcctatatttttcactggagaagag
actcctacaattgcgcctgccctacctgggacctccatcttctcaggtgccgtgccagtc
tggccaagagtggacaccttagtcaagtggccaaggacacaggctggatcggatgcccac
attggattctcagcctcaccatttaataagtaa

>gi568815595r:107957477_108190908|GENSCAN_predicted_peptide_5|93_aa
MAVSCRHIEAIGIHVGLQGISTEAFLPSSNLSLANIITNCIWEGWSNAVWKVSLKNMITA
EATGVDVILSQLQSHRILELEGELGNTESNSFT

>gi568815595r:107957477_108190908|GENSCAN_predicted_CDS_5|282_bp
atggctgtgtcctgcagacatatagaggccatcggaatccatgtggggctccagggcatc
tctacagaggcatttcttccttccagcaacttatctctagccaacataatcaccaattgc
atttgggaaggatggagtaacgcagtgtggaaggtctccctgaagaacatgatcacagca
gaagccactggggtagacgtcattctctcacagttgcagagtcatagaatattagagcta
gaaggggagttagggaacactgaatccaattcctttacctaa

>gi568815595r:107957477_108190908|GENSCAN_predicted_peptide_6|248_aa
MGLSGGRPPEETEIGSPTEWGSKRSKAKVKKREIGGSKCSGKGGSDRREKQREKSKCIKQ
VAGLAELGHSGHVPGMEMSFMVGVLELEPKAPGLLWVPPESYILIHSHGVPAQVSQTQVL
PVKGVQVLGALNKELDKTHKQSKKRKKQQKQRCIENENTLHRSVHIELASAGTGFLCPGR
VRRCQTQSLASMHCILQGSPVAFGWSWEPSTEFYYESSRDSMRGKPPVDLLFFPLKVDGY
MEAGGAGS

>gi568815595r:107957477_108190908|GENSCAN_predicted_CDS_6|747_bp
atgggcttgtcagggggacggccacctgaagaaacagagatagggtctcccacggaatgg
ggcagcaaaagaagtaaagcaaaagtgaagaaaagagaaatagggggcagcaagtgttca
ggaaaaggggggtcagataggagagagaagcaaagagaaaaatcaaagtgtataaagcaa
gtggcgggactcgctgagcttggacacagtggtcacgttcctggcatggagatgtcattc
atggtaggtgttcttgaattggagcctaaggctccaggacttttgtgggttcctccagaa
tcctacatccttatacactcccacggggtgcctgcccaggtctctcagacccaagtgtta
ccagtgaagggtgtccaggttcttggcgctttgaacaaagaattggacaaaactcacaaa
caaagcaagaaaagaaagaagcaacaaaagcagagatgtattgaaaatgaaaacacactc
cacaggtcagtgcacattgaactggcctctgcggggactggctttctgtgccctggcaga
gttaggagatgtcaaacccagagccttgccagcatgcattgcatccttcagggtagtcct
gtggcctttggttggtcttgggagcctagtacagagttttattatgagagctctagggac
tcaatgagaggaaaaccacctgttgatcttttatttttccccctgaaagtggatggctac
atggaagctggtggtgctggtagctaa

>gi568815595r:107957477_108190908|GENSCAN_predicted_peptide_7|146_aa
GFLDKLHNEITRTLEKISSREKYINNQLENLVQEYRAAQAQLSEAKERYQQGNGGVTERT
RLLSEVMEELEKVKQEMEEKGSSMTDGAPLVKIKQSLTKLKQETVEMDIRIGIVEHTLLQ
SKLKEKSNMTRNMHATVIPEPATGFY

>gi568815595r:107957477_108190908|GENSCAN_predicted_CDS_7|441_bp
ggatttttggacaaactccataatgaaattactaggactttggaaaagatcagcagccga
gaaaagtacatcaacaatcagcttgagaatttggttcaagaatatcgtgcagctcaagcc
cagctgagtgaggcaaaggagcgataccagcagggaaatggaggagtgacggaaagaacc
agactcctctctgaggttatggaagaattagaaaaggtaaaacaagaaatggaagaaaag
ggcagcagcatgactgatggtgctcctttggtgaagattaaacagagcttaacaaaactg
aagcaagaaactgtagagatggacattagaattggcattgtggaacacacactactccaa
tcaaagctgaaggagaagtccaacatgactaggaacatgcatgccacagttattccagaa
ccagcaacaggcttttattaa