GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:32:36

Sequence gi568815592f:50718892_50943389 : 224498 bp : 38.20% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    199    259   61  0  1   64  107    62 0.362   3.09
 1.02 Intr +   3190   3244   55  2  1   36   59    81 0.599  -2.88
 1.03 Intr +   4455   4717  263  0  2   76   36   277 0.891  17.51
 1.04 Intr +   9965  10130  166  0  1  103  116    57 0.967   8.10
 1.05 Intr +  10303  10421  119  1  2   69   86    56 0.913   2.69
 1.06 Intr +  26216  26357  142  0  1   64   82    97 0.877   5.19
 1.07 Term +  53754  53973  220  0  1   81   37   190 0.927   8.73
 1.08 PlyA +  54483  54488    6                               1.05

 2.00 Prom +  56332  56371   40                              -4.45
 2.01 Init +  90753  90870  118  2  1   76   74    51 0.310   2.92
 2.02 Term +  97306  97466  161  2  2   67   42   182 0.753   8.62
 2.03 PlyA +  97477  97482    6                              -0.45

 3.00 Prom +  97525  97564   40                              -4.15
 3.01 Init + 100034 100081   48  1  0   90  105    78 0.905  10.70
 3.02 Intr + 104516 104974  459  1  0  129   91   384 0.871  35.25
 3.03 Intr + 106980 107432  453  2  0   33   15   207 0.009   0.43
 3.04 Intr + 109728 109788   61  2  1   42   86    72 0.014  -0.21
 3.05 Intr + 117170 117389  220  0  1   97   86   150 0.195  12.14
 3.06 Intr + 119084 119202  119  2  2   49  121    75 0.982   6.09
 3.07 Intr + 121265 121406  142  0  1  106   89    85 0.998   8.89
 3.08 Term + 124201 124501  301  1  1   97   48   304 0.980  21.01
 3.09 PlyA + 124782 124787    6                               1.05

 4.00 Prom + 125441 125480   40                             -10.65
 4.01 Init + 127026 127237  212  2  2   51   44   266 0.890  14.81
 4.02 Intr + 131526 131698  173  0  2  101    0   102 0.413   1.36
 4.03 Term + 132579 132865  287  1  2   31   41   231 0.668   7.28
 4.04 PlyA + 133008 133013    6                               1.05

 5.02 PlyA - 133733 133728    6                               1.05
 5.01 Sngl - 138771 138364  408  0  0  102   41   364 0.956  29.14
 5.00 Prom - 152132 152093   40                              -4.85

 6.07 PlyA - 152860 152855    6                               1.05
 6.06 Term - 156967 156853  115  0  1   93   53    84 0.220   2.46
 6.05 Intr - 183895 183703  193  2  1   51  101    73 0.439   2.53
 6.04 Intr - 184339 184230  110  0  2   79   53    80 0.494   2.61
 6.03 Intr - 185483 185387   97  0  1   83   44    52 0.489  -1.55
 6.02 Intr - 189437 189273  165  0  0   47   82   129 0.625   7.21
 6.01 Init - 194365 194137  229  1  1   90   34   340 0.547  27.38
 6.00 Prom - 197434 197395   40                              -3.65

 7.03 PlyA - 198189 198184    6                               1.05
 7.02 Term - 199233 198589  645  0  0  -19   48   250 0.706   3.43
 7.01 Init - 200155 199523  633  1  0   30   41   254 0.691  10.29
 7.00 Prom - 200650 200611   40                              -6.15

 8.02 PlyA - 200819 200814    6                               1.05
 8.01 Sngl - 202063 201635  429  1  0   88   47   421 0.919  34.03
 8.00 Prom - 218908 218869   40                              -2.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  28008  28129  122  0  2   32   75    89 0.949   1.22
S.002 Term +  28679  28818  140  0  2  109   38    89 0.929   3.14


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_1|341_aa
GSVEAQCGLVLNGQGGVIRRACNEGPIAKECVKEGAAARKAQSLGIRDGESRGFFQQLLK
EYNWRSVGSLALLPLSVLFGFQMDYLESLLSLAKTHLYGSSIMGEDRARDTPQASPASLV
PSADSAGGTCVVNPTDLFCSVPGRLSLLSSTSKYKVTIAEVKRRLSPPECLNASLLGGIL
RRAKSKNGGRCLREKLDRLGLNLPAGRRKAANVTLLTSLVEGEALHLARDFGYTCETEFP
AKAVGEHLARQHMEQKEQTARKKMILATNLITHGFGTPAICAALSTFQTVLSEMLNYLEK
HTTHKNGGAADSGQGHANSEKAPLRKTSEAAVKEGKTEKTD

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_1|1026_bp
ggctctgtggaggcccagtgtgggcttgttctcaatggccaaggtggagtgataagaaga
gcctgtaatgaaggcccgatagccaaagaatgcgtgaaagagggggcagcagctaggaag
gcccagagccttggaatccgggatggagaaagccgtggattctttcagcagctcctgaag
gagtacaattggaggagcgtgggaagccttgctcttcttcctttgtcagtactcttcgga
ttccagatggattacctggaatcactactctcgctagccaaaactcatctctatggttca
tccattatgggtgaagatagagccagagatacacctcaagcctcgcctgcctccttagtc
cccagtgcagattctgcaggtggcacctgtgtggtcaaccccacagacttattttgctct
gtccctggccgtttgtcccttcttagttctacttccaaatacaaggtgaccattgctgag
gtaaagaggcgcctctccccacctgagtgcctcaatgcttcactcttgggaggcattttg
agaagagcaaaatcaaagaatgggggccgctgcctgagagagaaattggataggcttggc
ttaaacttaccagcaggaagacggaaagcagctaatgtcaccctccttacttccttggtt
gaaggggaggctttgcacttggctcgggattttggctacacttgtgaaacagagtttcca
gccaaagcagtaggagaacatcttgccagacaacatatggaacagaaagaacagacagca
agaaaaaagatgatcctggcgaccaatttgatcactcatggctttgggactccggcaata
tgtgcagctctaagcactttccaaacagttctcagtgaaatgctgaactacttggaaaaa
cacactactcacaagaacggcggagcggcggattctggccaaggacatgccaactcggag
aaagctcccctgcggaaaacttcagaggctgccgtgaaagagggcaaaacagaaaagaca
gactag

>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_2|92_aa
MTMKHAAFKHLFNKAHLAPPLIHLTLSGHSRCFREHGVGGFQERKETFAEKEIKETCRVC
VYKIPTEGAVARSMTGNGPWERFTLQCLGLFE

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_2|279_bp
atgacgatgaagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccgccc
ttaatccatttaaccctgagtggacacagcagatgtttcagagagcatggggttgggggt
tttcaagaacggaaagaaacctttgccgaaaaagaaatcaaggagacttgcagggtttgc
gtctataaaattccgacagagggcgctgttgcccgttcaatgacagggaacggtccgtgg
gaacggtttaccttgcaatgtctaggacttttcgaataa

>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_3|600_aa
MLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHTPSSDFQPPYFP
PPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGSLLPQPRAALPQ
LSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQCKGHTLLLSLE
GNSKDRDGLCLRGDDRPPKARVKLTDAGQVTKTRGYVSRTTASNPKASNHLLNTEGSTSE
LGSWGAGAKVTQAGWDFNALPTAIEWVACTGPVFKRACTGPVFKRTRECLGLDLKVTCSD
LKDLVCVPDPLEPGSWQTLRSVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLG
GMSVNTGEVFCSVPGRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNG
GRSLRERLEKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYL
NRQHTDPSDLHSRKNMLLATKQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSL
ITHGFGAPAICAALTALQNYLTEALKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_3|1803_bp
atgctctggaagcttgtggagaatgtcaagtacgaagatatctatgaggaccggcacgat
ggtgtcccgagccacagctcgcggctctcccagctgggctcggtgtcccaaggaccctac
tcgagcgccccgccgctgtcccacaccccgtcgtcggacttccagccgccctacttccca
cccccctaccagccgctcccctaccaccagagccaggacccctactcccacgtcaacgac
ccctactccctgaacccactgcaccagccccagcaacatccctgggggcaacggcagcgg
caagaagtgggttcggaagccggctctctcctgccccagcctcgggccgccttgccccag
ctctcgggccttgacccccggagggactaccactcggtccgccggccggacgtgctgctg
cattcggcgcaccacggcctggacgcgggcatgggtgacagcctctcgctgcacggcctc
ggccatcccggaatggaagacgtccagtgcaagggacacaccctgctcctgtccctagag
ggaaacagcaaagacagggacggtctctgcctccgcggtgatgacagacctcccaaggcc
agggtgaagttgactgatgcagggcaggtgacaaagaccaggggttatgtttccaggacc
acagcctcgaatccgaaggcttccaatcatctgctcaacacagaaggatccacttccgag
ttaggaagctggggtgcgggggctaaagttacacaagcaggttgggatttcaacgctctc
cctacagctatcgaatgggtggcctgcactggtccagtctttaaaagggcctgcactggt
ccagtctttaaaaggaccagagagtgcctaggcctggaccttaaagtcacttgttccgat
ctcaaggacctcgtgtgtgttccagatccccttgagccagggagctggcagacactgagg
tcagttgaagatgccaataacagcggcatgaatctattggaccagtctgtcattaaaaaa
gttccagttcctcccaaatcggtgacttctctaatgatgaataaagacggcttcctggga
ggcatgtctgtcaacaccggcgaggtgttttgctccgtcccaggccgtttgtctctgctc
agttcaacttcgaagtacaaagtaactgtgggagaagttcagagacggctgtcgccccct
gaatgcctcaatgcatctctcctcggcggagtcctcagaagagccaaatcgaaaaatggg
gggagatctttgcgagaaaggctagaaaaaatcggtttgaatttacccgcgggcaggcgc
aaagcagcaaatgtcacgttactcacctccctggtggaaggagaagctgttcacttagct
agggattttgggtacatttgcgaaacggagtttcccgccaaagccgtctctgagtatttg
aaccggcagcacacagacccgagtgacctgcactcccgaaagaatatgctgttggccacc
aagcaactttgtaaagaatttacggatctactggcgcaggaccggacaccgatagggaac
agccgacccagccccatcctggagccggggatccagagctgcctcacgcacttcagcctc
atcacgcacggcttcggcgccccggccatttgcgccgcgctcacggccctgcagaactat
ctcaccgaggcgctcaaaggcatggacaagatgttcttgaacaacaccaccactaacagg
cacacgtctggggaaggcccaggtagtaaaactggcgacaaggaggagaaacacaggaaa
tga

>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_4|223_aa
MGRRPVGCRWGGLPAPPAATRGAGSWRESGLEISKESEASPPPPLPVRKHPTVTILKRGD
GMGIVLLGKAGFPELNHRHQLGDWVITHAPGTGTAGQRTARAPRQPASSRRTRLREPASR
HALQVAKQVWKLPKPDRSTAQNRVEDRVQSLSPSTCHVNHKALNTGNSASGLSIRCPRAQ
KHLIARKAGGGYLGKESATRNSSFSDLGNPIFRQFLHSVGFYF

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_4|672_bp
atggggcggcgcccggtgggctgcaggtggggagggctcccagcgccgccagcggccacc
cggggcgccggctcctggagggagagtggcctagaaatatccaaggaatccgaagcttcc
cctcctccacctctgccagtacggaaacaccccaccgtcacaatcctaaagcggggagat
gggatgggaattgtcttacttggcaaggcagggtttccagagctcaatcaccgacaccag
ttgggagactgggtaataacacacgctccgggcacagggaccgcgggccaacgaaccgcg
cgtgcgccgcgccagcctgcgtcgagccgtcgcacacggctccgggagcccgcgtctagg
cacgctctccaggttgccaagcaggtgtggaaactccccaaaccagacaggtctactgcg
cagaatagggtggaggatcgagtccagtcactgagccctagcacttgccatgtgaaccat
aaggccctgaacactggaaattcagcgtccggactctcgatcagatgccctagagctcag
aagcacctgattgcgcggaaggctggtggtggttacttgggcaaagagagtgcgactcga
aactcgagtttctcggatttaggaaatccgatctttagacagtttctacacagcgttgga
ttttacttctaa

>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_5|135_aa
MGHVCTKTMKKAAWVIIEKYYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQ
IQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVT
QPTVGMNFKMPRGPV

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_5|408_bp
atgggccacgtttgcaccaaaaccatgaagaaggctgcctgggtcatcatagaaaagtac
tacatgcacctgggcaacgacttccacacaaacaagcacatgtgcaaggagattgccatt
atccccagcaagaagctccacaacaagacagcaggttatgtcacccatctgatgaagcag
attcagagaggcccagtaagaggtatctccatcaagctgcaggaggaggtgagagaaagg
agagacaattatgttcctgagatctcagccctggatcaggagatcattgaagtagatcct
gacactaaagaaatgctgaagcttttggactttggtggtctgtctaacctgcaggtcact
cagcctacagttgggatgaatttcaaaatgcctcggggacctgtttga

>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_6|302_aa
MTASNSQVRQNYHQDSEAAINRQINLELYASYFNLSMSYYFDRDDAALKNFAKYFLHQSH
EEREHAEKLMKLQNQQGGSTGMFNSDNANTSLQRRENFPLGFEGSADFQWAEVEEQSEQR
EHHKQRSECEKGFRSHQSTGFTLTVEDLVEAVFKSVELVKLPIQSSCLLKQWLPALENLL
SPSSKAPGVQLYQRTYHTDSGLQKLFLLKTAYKILSLFKAQYNTGKAMEKKVLSIFSPLK
VVLQCLNTTGGALGLSKVSAISKRMCFQGIQKELFPTAPNSICFPHPVPTRGAAEAQSQP
DA

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_6|909_bp
atgactgcatccaactcgcaggtgcgccagaactaccaccaggactcagaggccgccatc
aaccgccagatcaacctggagctctacgcctcctactttaacctctccatgtcttactac
tttgaccgtgatgatgcggctttgaagaactttgccaaatactttcttcaccaatctcat
gaggagagggagcatgctgagaaactgatgaaactgcagaaccaacaaggagggagcact
ggaatgtttaattcggacaatgccaatacaagtttacagagaagagagaactttccattg
ggttttgaaggttctgctgattttcaatgggcagaggtggaggaacagtctgagcagaga
gaacatcataaacaaaggagtgaatgtgagaaaggcttcaggtcccatcagagtactggc
ttcactttgactgtagaagatttagttgaagcagtattcaaaagtgtagaacttgtcaag
ctacctatccagtcctcttgtcttctgaaacagtggttacctgctctggaaaaccttctc
tctccatcctccaaagctcctggggtacagctttatcagcgcacctatcacactgattct
ggtctccaaaaactcttcttgctgaaaacagcatacaaaatactttccctcttcaaagcc
caatacaacactggaaaagcaatggagaagaaagtactcagtatcttttccccactaaaa
gttgtactgcaatgcttgaacacaactggaggagccctaggtttatcaaaagtatctgcc
atttctaaaagaatgtgtttccaaggcatccagaaagagctctttccaactgcaccaaat
tccatttgctttccacaccctgtcccgacaaggggtgctgcagaagcacaaagccagcca
gatgcatga

>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_7|425_aa
MRTKTQHTRISGTFKTVCRGKFIALNAHKRKQERSKIDTLTSQLKQLERQEETHSKASRR
QEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRLLARLIKKKREKNQIDPIKNDK
GDITTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPVTGSE
IVAIINSLPTKKSPGPDRFTATFYQRYKEELHINRTKDKNHMIISIDAEKAFDNIQQHFM
LKTLNNLGIDGMYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGYTLSPLLFHIVLE
VLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKI
NVQKSKAFLYTNNKQTESQIMSELPFTIASKRIKYLGIQLTRHVKDLFKENYKPLLNEIK
EDTKK

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_7|1278_bp
atgagaacaaagacacaacataccagaatctctgggacattcaaaacagtgtgtagaggg
aaatttatagcactaaatgcccacaagagaaagcaggaaagatccaaaattgacacccta
acatcacaattaaaacaactagaaaggcaagaggaaacacattcaaaagctagtagaagg
caagaaatcactaagatcagagcagaactgaaggagatagagacacaaaaaacccttcaa
aaaatcaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagactgcta
gcaagactaataaagaagaaaagagagaagaatcaaatagacccaataaaaaatgataaa
ggggatatcaccaccgatcccacagaaatacaaactaccatcagagaatactacaaacac
ctctatgcaaataaactagaaaatctagaagaaatggataaatttctcgacacatacacc
ctcccaagactaaaccaggaagaagttgaatctctgaatagaccagtaacaggctctgaa
attgtggcaataatcaatagcttaccaaccaaaaaaagtccaggaccagatagattcaca
gccacattctaccagaggtacaaggaggaactgcatataaacagaaccaaagacaaaaac
cacatgattatctcaatagatgcagaaaaggcctttgacaacattcaacaacacttcatg
ctaaaaactctcaataacttaggtattgatgggatgtatctcaaaataatacgagctatc
tatgacaaacccacagccaatatcatactgaatgggcaaaaactggaggcattccctttg
aaaactggcacaagacagggatacactctctcaccactcctattccacatagtgttggaa
gttctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagag
gaagtcaaattgtccctgtttgcagatgacatgattgtatatctagaaaaccccattgtc
tcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatc
aatgtacaaaaatcaaaagcattcttatacaccaataacaaacaaacagagagccaaatc
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaaggcatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaagaaatga

>gi568815592f:50718892_50943389|GENSCAN_predicted_peptide_8|142_aa
MGKKQRRKTENSKNQRASPPPKECSSSPATEQSWMEKDFDELREGGFRRSNYTKLKEDVQ
NHHKEAKNLQKRLDEWLTRITNVEKSINDLTELKTMARELRDECTSLSSQLNQLEERVSV
TEDQMNGLKQEEKFREKKNKKK

>gi568815592f:50718892_50943389|GENSCAN_predicted_CDS_8|429_bp
atggggaaaaaacagagaagaaaaactgaaaattctaaaaatcagagggcctctcctcct
ccaaaggaatgcagctcctcaccagccacggaacaaagctggatggagaaagactttgac
gagttgagagaaggaggcttcagacgatcaaactacaccaagctaaaggaggacgttcaa
aaccatcacaaagaagctaaaaaccttcaaaaaagattagatgaatggttaactagaata
accaatgtagagaagtccataaatgacctgacggagctgaaaaccatggcacgagaacta
cgtgatgaatgcacaagcctcagtagccaactcaatcaactagaagaaagggtatcagtg
actgaagatcaaatgaatggattgaagcaagaagagaagtttagagaaaaaaagaataaa
aagaaatga