GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:34:46

Sequence gi568815587r:118066890_118276431 : 209542 bp : 46.65% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   2627   2666   40                              -2.66
 1.01 Init +   8107   8168   62  0  2   93  103    45 0.281   5.74
 1.02 Intr +  18624  18651   28  0  1   71   87    27 0.026  -0.98
 1.03 Intr +  27933  27966   34  2  1  142  123    16 0.967   8.30
 1.04 Intr +  32096  32209  114  0  0  113   89   115 0.997  14.52
 1.05 Intr +  32814  32869   56  1  2  107   42    96 0.887   5.60
 1.06 Intr +  33292  33361   70  0  1   97   17    47 0.324  -2.75
 1.07 Intr +  36212  36364  153  0  0  100  109   148 0.517  18.14
 1.08 Intr +  37802  37931  130  0  1   82   91   102 0.996   9.65
 1.09 Intr +  40852  40986  135  1  0   78  106   135 0.729  13.98
 1.10 Intr +  41967  42007   41  0  2   79   97    -8 0.799  -2.93
 1.11 Intr +  44852  45011  160  0  1   89  110   146 0.965  15.95
 1.12 Intr +  46380  46546  167  0  2  104   94   263 0.999  28.10
 1.13 Intr +  47940  48038   99  1  0   85  107    36 0.971   5.28
 1.14 Intr +  48249  48391  143  1  2   49   75   232 0.999  18.07
 1.15 Intr +  50416  50565  150  0  0  111  116   102 0.987  15.66
 1.16 Intr +  58406  58488   83  1  2  102   61    51 0.223   2.24
 1.17 Term +  62565  62619   55  0  1  113   43    18 0.113  -3.17
 1.18 PlyA +  66431  66436    6                               1.05

 2.14 PlyA -  66508  66503    6                               1.05
 2.13 Term -  70231  70138   94  0  1  144   52   107 0.645  10.00
 2.12 Intr -  74447  74318  130  0  1   39   81   317 0.996  25.85
 2.11 Intr -  77172  76944  229  0  1   94   26   331 0.987  24.94
 2.10 Intr -  78340  78168  173  2  2   42   87   333 0.977  28.26
 2.09 Intr -  79029  78792  238  0  1   87   31   120 0.777   3.39
 2.08 Intr -  87992  87955   38  0  2  104   82    36 0.262   2.58
 2.07 Intr -  89524  89419  106  1  1  101   47    26 0.197  -0.41
 2.06 Intr -  99317  99281   37  1  1   91   91    41 0.234   2.96
 2.05 Intr - 100197 100002  196  1  1  105   11   346 0.051  27.07
 2.04 Intr - 101406 101196  211  0  1   70   67   378 0.978  32.39
 2.03 Intr - 101862 101696  167  1  2   90  101   247 0.830  25.88
 2.02 Intr - 102699 102659   41  2  2   97   97    -6 0.229  -0.93
 2.01 Init - 107609 107521   89  2  2   89   80    22 0.106   1.64
 2.00 Prom - 110913 110874   40                              -5.36

 3.18 PlyA - 111290 111285    6                               1.05
 3.17 Term - 113771 113651  121  1  1   39   47   171 0.923   6.05
 3.16 Intr - 125199 125099  101  0  2   55   73    58 0.361  -0.09
 3.15 Intr - 126714 126505  210  0  0   44   59    86 0.306   0.41
 3.14 Intr - 129932 129846   87  2  0   86   81   133 0.951  12.57
 3.13 Intr - 131202 131109   94  2  1   95   51    68 0.937   3.77
 3.12 Intr - 133723 133585  139  2  1   65   77    94 0.887   5.52
 3.11 Intr - 136776 136539  238  0  1   99   -6   261 0.779  14.99
 3.10 Intr - 139102 138993  110  2  2   95   87   -11 0.508  -0.50
 3.09 Intr - 143823 143598  226  0  1  103  107   230 0.807  23.96
 3.08 Intr - 145672 145518  155  2  2   73   92    21 0.738   0.79
 3.07 Intr - 147997 147935   63  2  0   85  106    34 0.243   3.59
 3.06 Intr - 150130 150025  106  1  1   66   50    31 0.033  -3.11
 3.05 Intr - 166634 166571   64  1  1   81  119    20 0.727   3.12
 3.04 Intr - 168700 168535  166  2  1  135   80    75 0.935  10.42
 3.03 Intr - 170371 170161  211  1  1   81   86   122 0.972   9.79
 3.02 Intr - 173488 173322  167  2  2   45   89   168 0.998  12.28
 3.01 Init - 185405 185333   73  2  1   85   96   102 0.875   9.95
 3.00 Prom - 189980 189941   40                              -5.26

 4.05 PlyA - 190044 190039    6                               1.05
 4.04 Term - 190424 190361   64  1  1  112   42    54 0.817   0.56
 4.03 Intr - 193312 193165  148  2  1   87   69   152 0.845  12.49
 4.02 Intr - 195759 195549  211  0  1   91   82   267 0.999  24.89
 4.01 Intr - 196208 196042  167  0  2  128   78    94 0.984  12.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:118066890_118276431|GENSCAN_predicted_peptide_1|559_aa
MPSSLHAQTAASFLVHHLSTSLKDNSGQAKDPDSDQPLNSLDVKPLRKPRIPMETFRKVG
IPIIIALLSLASIIIVVVLNCKLSGSEQRLEEQGEFLLSDIMSTSEITHVKDQAKNQVLQ
KIKVILDKYYFLCGQPLHFIPRKQLCDGELDCPLGEDEEHCVKSFPEGPAVAVRLSKDRS
TLQVLDSATGNWFSACFDNFTEALAETACRQMGYSSSQLSLPLDVSSKPTFRAVEIGPDQ
DLDVVEITENSQELRMRNSSGPCLSGSLVSLHCLACGKSLKTPRVVGVEEASVDSWPWQV
SIQYDKQHVCGGSILDPHWVLTAAHCFRKHTDVFNWKVRAGSDKLGSFPSLAVAKIIIIE
FNPMYPKDNDIALMKLQFPLTFSGTVRPICLPFFDEELTPATPLWIIGWGFTKQNGGKMS
DILLQASVQVIDSTRCNADDAYQGEVTEKMMCAGIPEGGVDTCQGDSGGPLMYQSDQWHV
VGIVSWGYGCGGPSTPGVYTKVSAYLNWIYNVWKDRTIQRSCNSPGTGLVIQQPAVPLME
LRNDNSLLPIVQGLKTIVS

>gi568815587r:118066890_118276431|GENSCAN_predicted_CDS_1|1680_bp
atgcccagcagccttcatgcccagacagctgcctctttcctggttcatcacctgagcacc
agtttaaaggacaactcaggacaagcaaaagatcctgacagtgatcaacctctgaacagc
ctcgatgtcaaacccctgcgcaaaccccgtatccccatggagaccttcagaaaggtgggg
atccccatcatcatagcactactgagcctggcgagtatcatcattgtggttgtcctcaat
tgcaagctgagtggctctgagcagcggctggaagaacagggcgagtttctgcttagcgat
atcatgagcaccagtgagataacacatgtaaaggaccaagctaaaaaccaagttttgcaa
aagatcaaggtgattctggataaatactacttcctctgcgggcagcctctccacttcatc
ccgaggaagcagctgtgtgacggagagctggactgtcccttgggggaggacgaggagcac
tgtgtcaagagcttccccgaagggcctgcagtggcagtccgcctctccaaggaccgatcc
acactgcaggtgctggactcggccacagggaactggttctctgcctgtttcgacaacttc
acagaagctctcgctgagacagcctgtaggcagatgggctacagcagctcacaactctct
ctccctcttgatgtgagcagcaaacccactttcagagctgtggagattggcccagaccag
gatctggatgttgttgaaatcacagaaaacagccaggagcttcgcatgcggaactcaagt
gggccctgtctctcaggctccctggtctccctgcactgtcttgcctgtgggaagagcctg
aagaccccccgtgtggtgggtgtggaggaggcctctgtggattcttggccttggcaggtc
agcatccagtacgacaaacagcacgtctgtggagggagcatcctggacccccactgggtc
ctcacggcagcccactgcttcaggaaacataccgatgtgttcaactggaaggtgcgggca
ggctcagacaaactgggcagcttcccatccctggctgtggccaagatcatcatcattgaa
ttcaaccccatgtaccccaaagacaatgacatcgccctcatgaagctgcagttcccactc
actttctcaggcacagtcaggcccatctgtctgcccttctttgatgaggagctcactcca
gccaccccactctggatcattggatggggctttacgaagcagaatggagggaagatgtct
gacatactgctgcaggcgtcagtccaggtcattgacagcacacggtgcaatgcagacgat
gcgtaccagggggaagtcaccgagaagatgatgtgtgcaggcatcccggaagggggtgtg
gacacctgccagggtgacagtggtgggcccctgatgtaccaatctgaccagtggcatgtg
gtgggcatcgttagttggggctatggctgcgggggcccgagcaccccaggagtatacacc
aaggtctcagcctatctcaactggatctacaatgtctggaaggatagaactattcagaga
agctgtaactccccagggacaggtcttgtgattcagcaaccagctgtaccgctgatggag
ctacggaatgacaattctctgctgcctattgtccagggtctgaaaaccattgtatcatag

>gi568815587r:118066890_118276431|GENSCAN_predicted_peptide_2|582_aa
MEDATSDEGGDSVGAGLVGMTMEVAKRKGSLSALFLVCCKPEEVPPGRSMEVTVPATLNV
LNGSDARLPCTFNSCYTVNHKQFSLNWTYQECNNCSEEMFLQFRMKIINLKLERFQDRVE
FSGNPSKYDVSVMLRNVQPEDEGIYNCYIMNPPDRHRGHGKIHLQVLMEEPPERDSTVAV
IVGASVGGFLAVVILVLMVVKCVRRKKEQKLSTDDLKTEEEGKTDGEGNPDDGAKTVDEA
RLEEQLQGLDAFLRTDRGGSIPCTHSDHLYKVILLQGVNAFQSRSTFDVASPGAKAVFLR
FPGSRLAARGRRTRLAQRGPARTCPSASLPLGTREEPPGRGNERLLDGGPGLRRPRFSSS
PYGTRLFPLLDRPARLFLLPVTLSLEVSVGKATDIYAVNGTEILLPCTFSSCFGFEDLHF
RWTYNSSDAFKILIEGTVKNEKSDPKVTLKDDDRITLVGSTKEKMNNISIVLRDLEFSDT
GKYTCHVKNPKENNLQHHATIFLQVVDRLEEVDNTVTLIILAVVGGVIGLLILILLIKKL
IIFILKKTREKKKECLVSSSGNDNTENGLPGSKAEEKPPSKV

>gi568815587r:118066890_118276431|GENSCAN_predicted_CDS_2|1749_bp
atggaggatgccacaagtgacgagggaggggactctgtcggggctgggcttgtggggatg
actatggaggtggcaaagagaaagggcagcttgtctgccctctttcttgtctgttgcaag
cctgaggaagtgccaccaggacggagcatggaggtcacagtacctgccaccctcaacgtc
ctcaatggctctgacgcccgcctgccctgcaccttcaactcctgctacacagtgaaccac
aaacagttctccctgaactggacttaccaggagtgcaacaactgctctgaggagatgttc
ctccagttccgcatgaagatcattaacctgaagctggagcggtttcaagaccgcgtggag
ttctcagggaaccccagcaagtacgatgtgtcggtgatgctgagaaacgtgcagccggag
gatgaggggatttacaactgctacatcatgaacccccctgaccgccaccgtggccatggc
aagatccatctgcaggtcctcatggaagagccccctgagcgggactccacggtggccgtg
attgtgggtgcctccgtcgggggcttcctggctgtggtcatcttggtgctgatggtggtc
aagtgtgtgaggagaaaaaaagagcagaagctgagcacagatgacctgaagaccgaggag
gagggcaagacggacggtgaaggcaacccggatgatggcgccaagactgtggatgaggcc
agactggaagagcagctccagggtctcgatgccttcctgagaactgacaggggaggaagc
attccatgtacccactctgatcatctgtacaaggtgatcctgctccagggggtgaatgcc
ttccagtctaggtccacttttgatgttgcaagtcctggagcaaaggccgtcttcctgcgg
ttcccagggtcccgtttggcggccagagggcgtcggactcggctggcccagcgaggtcca
gcccgaacgtgtccttctgcctctctgcccctggggaccagggaggagcctccagggcgg
gggaacgagaggctactggacggcggcccgggactgcggcggccgcgtttctcttcttca
ccttacgggacccggctcttccccctcctcgaccgccccgcccgcctcttcctgctcccc
gtaaccctgtcgctggaggtgtctgtgggaaaggccaccgacatctacgctgtcaatggc
acggagatcctgctgccctgcaccttctccagctgctttggcttcgaggacctccacttc
cggtggacctacaacagcagtgacgcattcaagattctcatagaggggactgtgaagaat
gagaagtctgaccccaaggtgacgttgaaagacgatgaccgcatcactctggtaggctct
actaaggagaagatgaacaacatttccattgtgctgagggacctggagttcagcgacacg
ggcaaatacacctgccatgtgaagaaccccaaggagaataatctccagcaccacgccacc
atcttcctccaagtcgttgatagactggaagaagtggacaacacagtgacactcatcatc
ctggctgtcgtgggcggggtcatcgggctcctcatcctcatcctgctgatcaagaaactc
atcatcttcatcctgaagaagactcgggagaagaagaaggagtgtctcgtgagctcctcg
gggaatgacaacacggagaacggcttgcctggctccaaggcagaggagaaaccaccttca
aaagtgtga

>gi568815587r:118066890_118276431|GENSCAN_predicted_peptide_3|776_aa
MQQRGAAGSRGCALFPLLGVLFFQGVYIVFSLEIRADAHVRGYVGEKIKLKCTFKSTSDV
TDKLTIDWTYRPPSSSHTVSIFHYQSFQYPTTAGTFRDRISWVGNVYKGDASISISNPTI
KDNGTFSCAVKNPPDVHHNIPMTELTVTERGFGTMLSSVALLSILVFVPSAVVVALLLVR
MGRKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCAECLRREHNQLPGEGNR
CPRCDELMLGHTIKEAPYDLHPYLKVESSMFCPLKLILLPVLLDYSLGLNDLNVSPPELT
VHVGDSALMGCVFQSTEDKCIFKIDWTLSPGEHAKDEYVLYYYSNLSVPIGRFQNRVHLM
GDILCNDGSLLLQDVQEADQGTYICEIRLKGESQVFKKAVVLHVLPEEPKELMVHVGGLI
QMGCVFQSTEVKHVTKVEWIFSGRRAKEEIVFRYYHKLRMSVEYSQSWGHFQNRVNLVGD
IFRNDGSIMLQGVRESDGGNYTCSIHLGNLVFKKTIVLHVSPEEPRTLVTPAALRPLVLG
GNQLVIIVGIVCATILLLPVLILIVKKTCGNKSSVNSTVLVKNTKKTNPEIKEKPCHFER
CEGEKHIYSPIIVREVIEEEEPSEKSEATYMTMWTATDLILGLKCAVPILLVAIVRFDKV
SLKNPLAGGIQIGNEEVKLSLFADDIIINLENPKDSSKKLLELVTLMQEVGSHGLRQLCP
VALQGTASFLAVFMGWQKKEEAGYVKPKISGNGAELTCVCGSMDGCAAEWDLAVHA

>gi568815587r:118066890_118276431|GENSCAN_predicted_CDS_3|2331_bp
atgcagcagagaggagcagctggaagccgtggctgcgctctcttccctctgctgggcgtc
ctgttcttccagggtgtttatatcgtcttttccttggagattcgtgcagatgcccatgtc
cgaggttatgttggagaaaagatcaagttgaaatgcactttcaagtcaacttcagatgtc
actgacaaacttactatagactggacatatcgccctcccagcagcagccacacagtatca
atatttcattatcagtctttccagtacccaaccacagcaggcacatttcgggatcggatt
tcctgggttggaaatgtatacaaaggggatgcatctataagtataagcaaccctaccata
aaggacaatgggacattcagctgtgctgtgaagaatcccccagatgtgcatcataatatt
cccatgacagagctaacagtcacagaaaggggttttggcaccatgctttcctctgtggcc
cttctttccatccttgtctttgtgccctcagccgtggtggttgctctgctgctggtgaga
atggggaggaaggctgctgggctgaagaagaggagcaggtctggctataagaagtcatct
attgaggtttccgatgacactgatcaggaggaggaagaggcgtgtatggcgaggctttgt
gtccgttgcgctgagtgcctgaggagggagcacaaccaactccctggggaaggcaacaga
tgtcccagatgtgatgaacttatgttaggacacaccataaaggaagccccttatgacctt
catccatatttgaaagttgagagcagcatgttttgcccactgaaactcatcctgctgcca
gtgttactggattattccttgggcctgaatgacttgaatgtttccccgcctgagctaaca
gtccatgtgggtgattcagctctgatgggatgtgttttccagagcacagaagacaaatgt
atattcaagatagactggactctgtcaccaggagagcacgccaaggacgaatatgtgcta
tactattactccaatctcagtgtgcctattgggcgcttccagaaccgcgtacacttgatg
ggggacatcttatgcaatgatggctctctcctgctccaagatgtgcaagaggctgaccag
ggaacctatatctgtgaaatccgcctcaaaggggagagccaggtgttcaagaaggcggtg
gtactgcatgtgcttccagaggagcccaaagagctcatggtccatgtgggtggattgatt
cagatgggatgtgttttccagagcacagaagtgaaacacgtgaccaaggtagaatggata
ttttcaggacggcgcgcaaaggaggagattgtatttcgttactaccacaaactcaggatg
tctgtggagtactcccagagctggggccacttccagaatcgtgtgaacctggtgggggac
attttccgcaatgacggttccatcatgcttcaaggagtgagggagtcagatggaggaaac
tacacctgcagtatccacctagggaacctggtgttcaagaaaaccattgtgctgcatgtc
agcccggaagagcctcgaacactggtgaccccggcagccctgaggcctctggtcttgggt
ggtaatcagttggtgatcattgtgggaattgtctgtgccacaatcctgctgctccctgtt
ctgatattgatcgtgaagaagacctgtggaaataagagttcagtgaattctacagtcttg
gtgaagaacacgaagaagactaatccagagataaaagaaaaaccctgccattttgaaaga
tgtgaaggggagaaacacatttactccccaataattgtacgggaggtgatcgaggaagaa
gaaccaagtgaaaaatcagaggccacctacatgaccatgtggacagccactgatttaatt
cttggtctgaaatgtgcggttcctatacttttagttgctattgtaagatttgataaggtt
agtcttaaaaatcctttggcggggggcatccaaattggtaatgaggaagtcaaactgtct
ctgtttgctgatgacataatcataaaccttgaaaaccctaaagactcatccaaaaagctc
ctagaactggtcacactgatgcaagaagtgggttcccatggtcttcggcagctctgccct
gtggctttgcagggtacagcctccttcctggctgttttcatgggctggcaaaaaaaagag
gaggccggctacgtcaaaccaaaaatctctggcaacggggcagagctgacatgtgtctgc
ggcagcatggatggctgtgctgcagagtgggacttggcagtgcacgcctaa

>gi568815587r:118066890_118276431|GENSCAN_predicted_peptide_4|196_aa
XLWPIAAVEIYTSRVLEAVNGTDARLKCTFSSFAPVGDALTVTWNFRPLDGGPEQFVFYY
HIDPFQPMSGRFKDRVSWDGNPERYDASILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIR
LSVVHTVRFSEIHFLALAIGSACALMIIIVIVVVLFQHYRKKRWAERAHKVVEIKSKEEE
RLNQEKKVSVYLEDTD

>gi568815587r:118066890_118276431|GENSCAN_predicted_CDS_4|591_bp
nctctttggcctatagcagctgtggaaatttatacctcccgggtgctggaggctgttaat
gggacagatgctcggttaaaatgcactttctccagctttgcccctgtgggtgatgctcta
acagtgacctggaattttcgtcctctagacgggggacctgagcagtttgtattctactac
cacatagatcccttccaacccatgagtgggcggtttaaggaccgggtgtcttgggatggg
aatcctgagcggtacgatgcctccatccttctctggaaactgcagttcgacgacaatggg
acatacacctgccaggtgaagaacccacctgatgttgatggggtgataggggagatccgg
ctcagcgtcgtgcacactgtacgcttctctgagatccacttcctggctctggccattggc
tctgcctgtgcactgatgatcataatagtaattgtagtggtcctcttccagcattaccgg
aaaaagcgatgggccgaaagagctcataaagtggtggagataaaatcaaaagaagaggaa
aggctcaaccaagagaaaaaggtctctgtttatttagaagacacagactaa