GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:00:48

Sequence gi568815581r:64914260_65156593 : 242334 bp : 44.10% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5053   5225  173  0  2   93   68   130 0.381   8.41
 1.02 Intr +  13377  13550  174  0  0   49   79   144 0.240   8.65
 1.03 Intr +  14248  14431  184  1  1   82    9   182 0.580   9.49
 1.04 Intr +  22885  22988  104  0  2  125  105    54 0.367   9.77
 1.05 Intr +  24872  24996  125  2  2   91   57    40 0.364   1.43
 1.06 Intr +  26324  26466  143  0  2   83  119   165 0.996  19.17
 1.07 Intr +  39418  39790  373  0  1   41  -60   358 0.110  10.94
 1.08 Intr +  39932  40234  303  0  0   53   58   203 0.527  10.36
 1.09 Intr +  42040  42171  132  2  0   99   67    74 0.030   7.02
 1.10 Intr +  43741  43836   96  2  0  109   86    12 0.040   3.08
 1.11 Term +  51626  51900  275  0  2   22   44   237 0.804   8.33
 1.12 PlyA +  52383  52388    6                               1.05

 2.03 PlyA -  52525  52520    6                               1.05
 2.02 Term -  58403  58231  173  0  2   78   54   150 0.989   8.59
 2.01 Init -  61926  61431  496  0  1   49   72   406 0.946  28.37
 2.00 Prom -  72726  72687   40                              -5.06

 3.06 PlyA -  73410  73405    6                               1.05
 3.05 Term - 100570  99998  573  1  0   86   41   545 0.996  44.05
 3.04 Intr - 101710 101654   57  1  0   88   89    12 0.549   0.38
 3.03 Intr - 104044 103994   51  1  0  135  100    45 0.985   9.50
 3.02 Intr - 139469 139243  227  0  2   55   99   169 0.873  12.40
 3.01 Init - 142781 142052  730  2  1   63   50   804 0.836  67.06
 3.00 Prom - 161571 161532   40                              -5.16

 4.06 PlyA - 162799 162794    6                               1.05
 4.05 Term - 164296 164221   76  0  1  128   53    82 0.933   6.01
 4.04 Intr - 172889 172804   86  2  2   77   75    61 0.063   2.32
 4.03 Intr - 186565 186422  144  1  0   39   94   129 0.865   9.08
 4.02 Intr - 186976 186802  175  0  1   55  110    39 0.551   2.74
 4.01 Init - 188935 188874   62  1  2   79   75    22 0.537   0.72
 4.00 Prom - 192081 192042   40                              -4.96

 5.00 Prom + 196089 196128   40                              -5.06
 5.01 Init + 208892 209027  136  1  1   82   60    87 0.202   3.74
 5.02 Intr + 210644 210741   98  0  2   47   54   101 0.052   2.33
 5.03 Intr + 214919 215079  161  1  2   60   45    83 0.078  -0.01
 5.04 Intr + 222932 223030   99  2  0  113   80    18 0.018   2.73
 5.05 Intr + 223274 223338   65  2  2   52   86    47 0.022  -0.74
 5.06 Intr + 224233 224333  101  2  2   63   48    90 0.034   2.33
 5.07 Intr + 239163 239259   97  2  1  112   64   140 0.430  13.58
 5.08 Term + 242196 242215   20  1  2  103   43    32 0.392  -1.32
 5.09 PlyA + 242261 242266    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  49851  49962  112  2  1   48   55   100 0.819   3.08
S.002 Init - 106360 106331   30  1  0   33   87    24 0.893  -3.46
S.003 Init + 107935 108006   72  0  0   59   78   107 0.971   7.87
S.004 Term + 108751 108957  207  0  0   52   49   119 0.886   1.74


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581r:64914260_65156593|GENSCAN_predicted_peptide_1|693_aa
MGAVGAAGAGWGGQRGRAGGARPAEAVGGRRLNPNGWGLTADRLQPPSCFFRYRSAVTFY
IGCDLCTNWYYGECVGIAEKEAKKMDVYICNDCKQAQEGSSEELYCICRTPYDESQSCRF
FIGRDRCQNWYHGCCIGILQSEAELIDEYVCPQCQSTEDAMTVLTPLTEKDDEELKRRQP
SKFSTPDYTVELKSTTLCWAPKTNPVRRTCWSHLLLATAPTLLLPFWGPSGRVDLEEAGI
AEPAAGTLDTGNKGCFQQIGFFVRPKLCAFSGLYYCDICHQDDASVILARIIHSWDLTKH
LQFMALKERIGWRYSLLFVGLLQLNIVVFGALLRPIIIRGPASPKIVIQENRKEAQYMLE
NEKTRTSIDSIDSGVELTTSPKNVPTHTNPELEPKADLQQVLVKTSPRPSKKKAPLLDFS
ILKEKKVFRRIGAGFVLNREPIRVIYIELICVILLTVSLFAFTFAREFWGLMSCSVFFGF
MVGTTGGTHIPLLAEDDVVGIEKMSSAAGVYIFIQSIAGLAGPPLAGLLVDQSKIYSRAF
YSCAAGMALAAVCLALVRPCKMGLCQHHHSGDGQCSLLHLYSSLMLIYDNSGEKHNKPSL
VTGRPARHAAVEEVTLGRRRQGKPSDRPHTSEPRRGSPRARKQVVRRRFAAAVPAGLGAA
GDSDAFPAREGPERRAGYSGPAAACFDFSTAAP

>gi568815581r:64914260_65156593|GENSCAN_predicted_CDS_1|2082_bp
atgggcgcagtgggggcggccggggccgggtggggaggccagaggggcagggcaggaggg
gcccggcctgcggaagcggttggagggagaaggctcaatccgaatggctggggcctcact
gcggatcgccttcagccgccatcttgtttcttccgttaccggagcgcggtcacgttctat
attggctgtgatctttgtactaactggtattatggagaatgtgttggcatcgcagaaaag
gaggctaagaaaatggatgtgtacatctgtaatgattgtaaacaggcacaagagggcagc
agtgaggaattgtactgtatctgcagaacaccttatgatgagtcacaatcttgcagattt
tttattggccgtgatcggtgtcagaattggtaccatgggtgctgcattggcatcttgcaa
agtgaggcagagctcattgatgagtatgtctgtccacagtgccagtcaacagaggatgcc
atgacagtgctcacaccactaacagagaaggatgatgaggagttgaagaggaggcagcct
tccaagttttctacccccgactacacagtggagctgaagagcaccactctctgctgggcc
cctaaaacaaatccagtaagaagaacgtgctggagccacttattgctcgccacagcccct
actctgctgcttccattctggggcccgagtggacgggtggacctagaggaggctggcatt
gctgagccagcagcagggacactagacacaggcaacaagggctgcttccagcagatcggc
ttctttgtacgacccaagctctgtgccttctctggcctctattactgtgacatctgccac
caagatgatgcctcagtgattctggccaggatcatccacagctgggacctcaccaagcac
ctgcaattcatggctctgaaggagcgcattggctggagatacagcctcctcttcgtgggc
ctactacagttaaacattgtcgtcttcggagcactgctcagacccatcatcatcagagga
ccagcgtcaccaaaaatagtcatccaggaaaatcggaaagaagcacagtatatgcttgaa
aatgagaaaacacgaacctcaatagactccattgactcaggagtagaactaactacctca
cctaaaaatgtgcctactcacactaacccagaactggagccgaaggcagacctgcagcag
gtcctggtgaagaccagccccaggccaagcaaaaagaaagccccgctattagacttctcc
attttgaaagagaaaaaagttttcaggaggatcggagctggttttgtcctcaacagagag
cccattcgtgtgatttacattgagctcatctgcgtcatcttattgactgtgtctctgttt
gcctttacttttgctagggaattctggggtctaatgtcatgtagcgtattttttgggttt
atggttggaacaacaggagggacccacattccactgcttgctgaggatgatgttgtgggc
attgagaagatgtcttctgcagctggggtctacatcttcattcagagcatagcaggactg
gctggaccaccccttgcgggtttgttggtggaccaaagtaagatctacagcagggccttc
tactcctgcgcagctggcatggccctggctgctgtgtgcctcgccctggtgagaccgtgt
aagatgggactgtgccagcatcatcactcaggtgacggtcaatgctcgctgctccatctt
tactcatcattaatgttaatttatgacaactcgggggaaaaacataacaagcctagtttg
gttacaggcaggcctgcacggcacgcagcagtggaggaggttaccctgggtcgccgacgc
caggggaagccaagcgaccgaccccacacttctgagccccgccggggaagtccccgggcg
cggaaacaggtggtgcgccggcggttcgcagctgctgtgcccgctggcctgggcgcagcc
ggggacagcgacgcgtttcctgcccgggaagggcccgagcgcagggccggctatagcggt
cccgcagctgcctgcttcgattttagcactgctgctccctag

>gi568815581r:64914260_65156593|GENSCAN_predicted_peptide_2|222_aa
MLAPRCLSDLTASPGIRVSASERQGRHEDTPHTCASGFQSPPPPTNKEGKVLWVTAPGSA
AAVRQPAAAADSFGGYAGCIRHAGTPLKPAACRARSHTGDPGDAGASVALENQAAEPRRG
QTGNWRLRGRTAGACSPLVTLYSGKGEPRPPNSSSGALRGVARAGRDILKFLKKKKPEDA
FCVVGITMIDLYPRDLWNFVFGQASLTDGIPFLALLLEASST

>gi568815581r:64914260_65156593|GENSCAN_predicted_CDS_2|669_bp
atgctggccccgcggtgcctttccgacctcactgcctctcctggcatccgggtctcggcc
tcggagcgccagggacgccacgaggacacgccccacacttgcgcgtctgggttccagtcc
ccgccgcccccaacaaataaagaagggaaagtcctttgggtgactgccccagggagcgcc
gcggctgtacgacaacctgcggcggccgccgactcatttgggggctacgctggttgcatt
cgtcacgccgggacgcctctcaaacccgcggcctgccgagcacgttcccacacgggcgac
cctggtgacgcgggcgcgtctgtggctctggagaaccaggccgcggagccccggcgaggg
cagacggggaactggcgactgcgggggcggacggctggggcttgtagtcccctcgtgacc
ctctactcaggaaaaggcgagccgcggccgccgaactccagctctggcgcgctcaggggc
gtggcgcgggcgggtcgggacatcctgaagttcttgaaaaagaagaaacctgaagatgcc
ttctgtgttgtgggaataacaatgattgatctttacccaagagacttgtggaattttgtc
tttggacaggcctctttgacagatggtattccgtttttggcattgttgttagaagcttct
tcaacttga

>gi568815581r:64914260_65156593|GENSCAN_predicted_peptide_3|545_aa
MKGKQKVGLPSLAHVTAVPQPSPRARPRLRARAPERHIELVTRRPGREAEKRPRRASAPP
GGSGSAHAPGPPPLRGRARPPSLPPSPAVLARPARPALRVSSLVPSLPGRARAAAALPAL
EPRCRSRPPPEEEVEGAGGARRGGGGGGKMADFLPSRSVLSVCFPGCLLTSGEAEQQRKS
KEIDKCLSREKTYVKRLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSN
VIKGMRVLVDAREKLHIPWGDNSNQQHGDKMMSFDTRAPMAAQGMVETRVFLQYLPAIRA
LWADSGIQNAYDRRREFQLGESVKYFLDNLDKLGEPVYRPSVITSISQTEVLTLRDYIPS
QQDILLARRPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEF
DQVLMEDRLTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQIVSIKDYFLEF
EGDPHCLRDVQKFLVECFRNKRRDQQQKPLYHHFTTAINTENIRLVFRDVKDTILHDNLK
QLMLQ

>gi568815581r:64914260_65156593|GENSCAN_predicted_CDS_3|1638_bp
atgaaagggaaacagaaagtcgggctccccagcctggcccacgtgaccgcggttcctcag
ccctccccgcgcgcccggccgcggctgcgggcgcgggcacccgagcgacacatcgagctc
gtgactcgccgcccagggcgggaggcggagaagcggccgcggcgtgcgagcgcgcctccg
ggaggcagcgggagcgcgcacgctccggggccaccgcccctccggggccgggcccgccct
ccttccctccctccctcccccgctgtcctggcccgccctgcccggcccgccctgcgagtc
agttcgctggttccctccctccctgggcgcgctcgggccgccgccgcgctccccgccctc
gagcctcggtgccggagccgcccgccgccggaggaggaggtggagggagccggaggggcc
cgccgaggcggcggcggcggcggcaagatggcggacttcctgccgtcgcggtccgtgctg
tccgtgtgcttccccggctgcctgctgacgagtggcgaggccgagcagcaacgcaagtcc
aaggagatcgacaaatgcctgtctcgggaaaagacctatgtgaagcggctggtgaagatc
ctgctgctgggcgcgggcgagagcggcaagtccaccttcctgaagcagatgcggatcatc
cacgggcaggacttcgaccagcgcgcgcgcgaggagttccgccccaccatctacagcaac
gtgatcaaaggtatgagggtgctggttgatgctcgagagaagcttcatattccctgggga
gacaactcaaaccaacaacatggagataagatgatgtcgtttgatacccgggcccccatg
gcagcccaaggaatggtggaaacaagggttttcttacaatatcttcctgctataagagca
ttatgggcagacagcggcatacagaatgcctatgaccggcgtcgagaatttcaactgggt
gaatctgtaaaatatttcctggataacttggataaacttggagaaccagtatatagacca
agtgtgatcacctccatttcacagacagaggtgctgacactcagagattatattccatca
caacaagatattctgcttgccagaagacccaccaaaggcatccatgaatacgactttgaa
ataaaaaatgttcctttcaaaatggttgatgtaggtggtcagagatcagaaaggaaacgt
tggtttgaatgtttcgacagtgtgacatcaatacttttccttgtttcctcaagtgaattt
gaccaggtgcttatggaagatcgactgaccaatcgccttacagagtctctgaacattttt
gaaacaatcgtcaataaccgggttttcagcaatgtctccataattctgttcttaaacaag
acagacttgcttgaggagaaggtgcaaattgtgagcatcaaagactatttcctagaattt
gaaggggatccccactgcttaagagacgtccaaaaattcctggtggaatgtttccggaac
aaacgccgggaccagcaacagaagcccttataccaccacttcaccactgctatcaacacg
gagaacatccgccttgttttccgtgacgtgaaggatactattctgcatgacaacctcaag
cagcttatgctacagtga

>gi568815581r:64914260_65156593|GENSCAN_predicted_peptide_4|180_aa
MPSDTPDSHTSLYFGRGCFCSLQAQDAAWKPKRNCLYHNSHQSLNEIELHKSTQRGALHS
CPTCPRTLPRCGPRHSRAQAPPTWKAAGIRASQSASDDAGSLACAARASTCRQVALSGPR
RDPAERQALSFLQAASILHYSTLGQPPPGASVAVTRKPLEQDVKAALSIQPDILLPDAEG

>gi568815581r:64914260_65156593|GENSCAN_predicted_CDS_4|543_bp
atgccctcagacacaccagactctcatacatccctgtacttcggcaggggctgcttctgc
agtctccaggcccaggacgcagcttggaaacctaaacggaattgtctttatcacaactca
caccagtcacttaatgaaatcgagctgcacaaatcgacccaaaggggtgccctccactcc
tgccccacgtgtcctcggacgcttcccagatgtggtccccggcactccagggcccaggcg
cctccaacttggaaagcagctggaatccgcgccagccaatccgcgagcgacgacgcgggc
tcattagcatgcgctgcgcgggcgtccacctgccgccaggtggcgctgtccggcccccgc
cgggaccccgccgagcggcaggcactgagcttcctgcaggcagcatctattctgcattac
tccaccctaggccagcccccgcctggggccagcgtggctgtgaccaggaagcccttggaa
caggatgtaaaagcagcactttccatccagcctgacatcctgcttccagatgcagaaggc
tga

>gi568815581r:64914260_65156593|GENSCAN_predicted_peptide_5|258_aa
MGFKGAPPKSLPPRPPIPRRASSVEEAARGPRVGIRGSRPPGKASLPTPEMVLNKGFLKK
RNSLEPRDEKEVGTTSEKLLTKSGGGCWKLKEEVGPPNLQHTAVVPEPSRHSQARGESGQ
LAETPREPQASRSSSSFSSRGPALRVSPAAPRGPGGGRIAPPGGRGQDDNPTPRPAVQAE
DGISPKGLSMLKPGQSWGPRDGRIWSTCFKMLVLIFRVAEIEALVKDMQNPETGVRMQNQ
RVLVTSVPHAMTGEFQLL

>gi568815581r:64914260_65156593|GENSCAN_predicted_CDS_5|777_bp
atgggcttcaagggggcccctccgaaaagccttccaccccggcccccaatcccgcggcgc
gcgagttccgtggaggaggccgcccgcggccccagagtcggcattaggggttcgcgtcca
cccggcaaggcctcccttcccaccccagaaatggtgctcaataaaggcttcttgaagaaa
cggaatagccttgagcccagagatgagaaagaagttggaacaactagtgaaaagctcctt
acaaagagcggtggtggctgctggaagctgaaggaggaggtgggaccccccaacctccaa
cacacagctgtggtgcctgagccatcccgtcacagtcaggcaaggggagaatctgggcag
ttggcagaaacaccgagggagccacaagcctccaggtcctcctcctccttctcctcccgg
ggccctgccctgcgggtctcacctgctgctccgcggggtcccggcgggggccggatagcg
ccccctggcggcaggggccaggatgacaatccgacaccaaggccagcagtacaggccgag
gatggcatttctccaaaaggactttcaatgctaaaacctggacagtcctggggaccccga
gacggtcgcatttggtccacctgtttcaagatgctcgtgctcatcttccgggtagcagag
attgaagcgctcgtgaaggacatgcagaacccagagacaggggtccgaatgcagaaccag
agggtcctggtcaccagcgttcctcatgccatgacaggtgaattccagctgctgtag