GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:36:30

Sequence gi568815582r:48261583_48462428 : 200846 bp : 42.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1196   1290   95  2  2  111  107    16 0.625   4.49
 1.02 Intr +   8434   8692  259  2  1   63   75   251 0.915  16.90
 1.03 Intr +  15756  15897  142  0  1   98   94   162 0.969  17.23
 1.04 Intr +  34433  34583  151  1  1  121   82    85 0.996  10.01
 1.05 Intr +  38080  38206  127  2  1   89   92   134 0.979  12.72
 1.06 Intr +  41590  41723  134  1  2   49   81   203 0.910  15.07
 1.07 Intr +  72634  72776  143  2  2   99   45   191 0.634  15.05
 1.08 Intr +  72916  73020  105  0  0   64   33    90 0.126   0.59
 1.09 Intr +  85925  86132  208  1  1  100   58   268 0.992  22.73
 1.10 Intr +  86518  86708  191  2  2   63  100   161 0.944  13.18
 1.11 Intr +  89999  90197  199  1  1  148   30   166 0.888  14.80
 1.12 Term +  94442  94677  236  0  2   76   31   164 0.542   5.00
 1.13 PlyA +  95429  95434    6                               1.05

 2.02 PlyA -  97690  97685    6                               1.05
 2.01 Sngl - 100846  99998  849  1  0   61   44   583 0.989  46.72
 2.00 Prom - 100914 100875   40                             -12.72

 3.00 Prom + 101290 101329   40                              -4.25
 3.01 Init + 101493 101640  148  2  1   55  103    87 0.945   7.20
 3.02 Intr + 103861 104094  234  2  0   38   50   129 0.387   0.84
 3.03 Intr + 104540 104702  163  0  1   70   15   152 0.014   4.21
 3.04 Intr + 112907 113000   94  2  1   57   98    67 0.014   3.65
 3.05 Intr + 119806 119938  133  0  1   28   36   140 0.469   2.10
 3.06 Term + 122406 122569  164  1  2   61   42   220 0.697  11.82
 3.07 PlyA + 124525 124530    6                               1.05

 4.00 Prom + 137006 137045   40                              -6.85
 4.01 Init + 139166 139286  121  1  1   68   94    63 0.973   5.30
 4.02 Intr + 139596 139706  111  1  0  108  110    59 0.873   9.53
 4.03 Term + 145052 145185  134  0  2   70   43   104 0.703   1.37
 4.04 PlyA + 145393 145398    6                               1.05

 5.00 Prom + 146361 146400   40                              -6.25
 5.01 Init + 149851 149960  110  0  2   57  105   115 0.759   9.84
 5.02 Intr + 166144 166262  119  1  2  104   58    51 0.486   2.89
 5.03 Term + 170547 170998  452  1  2   43   48   240 0.796   9.86
 5.04 PlyA + 171175 171180    6                               1.05

 6.06 PlyA - 171229 171224    6                               1.05
 6.05 Term - 172260 171892  369  0  0  -10   36   273 0.032   5.96
 6.04 Intr - 173198 173069  130  1  1   24   20   104 0.044  -3.02
 6.03 Intr - 173920 173793  128  1  2   90   78    76 0.567   5.36
 6.02 Intr - 175722 175492  231  0  0   81   66   186 0.467  12.75
 6.01 Init - 184559 184416  144  2  0   58   76    92 0.196   5.17
 6.00 Prom - 189136 189097   40                              -7.85

 7.00 Prom + 190730 190769   40                              -4.55
 7.01 Init + 193962 194171  210  2  0   75   93   137 0.975  10.39
 7.02 Intr + 194358 194480  123  2  0   98   72    93 0.784   8.56
 7.03 Term + 196177 196227   51  0  0   84   43    47 0.597  -3.75
 7.04 PlyA + 199853 199858    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  85385  85387    3  1  0  113   81     0 0.902   1.85
S.002 Term + 104540 104730  191  0  2   70   40   169 0.842   6.93
S.003 Sngl - 192116 191541  576  2  0   41   54   227 0.877  10.52


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582r:48261583_48462428|GENSCAN_predicted_peptide_1|663_aa
XLKKMPQSMPEYALTRNYLELMVELPWNKSTTDRLDIRAARILLDNDHYAMEKLKKRVLE
YLAVRQLKNNLKGPILCFVGPPGVGKTSVGRSVAKTLGREFHRIALGGVCDQSDIRGHRR
TYVGSMPGRIINGLKTVGVNNPVFLLDEVDKLGKSLQGDPAAALLEVLDPEQNHNFTDHY
LNVAFDLSQVLFIATANTTATIPAALLDRMEIIQVPGYTQEEKIEIAHRHLIPKQLEQHG
LTPQQIQIPQVTTLDIITRYTREAGVRSLDRKLGAICRAVAVKVAEGQHKEAKLDRSDVT
EREGCREHILEDEKPESISDTTDLALPPEMPILIDFHALKDILGPPMYEMEVVGVAALLA
AVDCMGAQASTALVAHHLLAVVFLGKVSQRLSQPGVAIGLAWTPLGGEIMFVEASRMDGE
GQLTLTGQLGDVMKESAHLAISWLRSNAKKYQLTNAFGSFDLLDNTDIHLHFPAGAVTKD
GPSAGVTIVTCLASLFSGRLVRSDVAMTGEITLRGLVLPVGGIKDKVLAAHRAGLKQVII
PRRNEKDLEGIPGNVRQDLSFVTASCLDEVLNAAFDGGFTVKTRPVVPVNLTSNHASGAE
ILTCLVVTNANTVKNVIFVIVPEIVHEKSMTVKYCDSDVYHCELPVLGDWSAFTVTKISY
VAR

>gi568815582r:48261583_48462428|GENSCAN_predicted_CDS_1|1992_bp
nnactcaaaaaaatgcctcagtcaatgccagaatatgctctgactagaaattatttggaa
cttatggtagaacttccttggaacaaaagtacaactgaccgcctggacattagggcagcc
cggattcttctggataatgaccattacgccatggaaaaattgaagaaaagagtactggaa
tacttggctgtcagacagctcaaaaataacctgaagggcccaatcctatgctttgttggc
cctcctggagttggtaaaacaagtgtgggaagatcagtggccaagactctaggtcgagag
ttccacaggattgcacttggaggagtatgtgatcagtctgacattcgaggacacaggcgc
acctatgttggcagcatgcctggtcgcatcatcaacggcttgaagactgtgggagtgaac
aacccagtgttcctattagatgaggttgacaaactgggaaaaagtctacagggtgatcca
gcagcagctctgcttgaggtgttggatcctgaacaaaaccataacttcacagatcattat
ctaaatgtggcctttgacctttctcaagttctttttatagctactgccaacaccactgct
accattccagctgccttgttggacagaatggagatcattcaggttccaggttatacacag
gaggagaagatagagattgcccataggcacttgatccccaagcagctggaacaacatggg
ctgactccacagcagattcagataccccaggtcaccactcttgacatcatcaccaggtat
accagagaggcaggggttcgttctctggatagaaaacttggggccatttgccgagctgtg
gccgtgaaggtggcagaaggacagcataaggaagccaagttggaccgttctgatgtgact
gagagagaaggttgcagagaacacatcttagaagatgaaaaacctgaatctatcagtgac
actactgacttggctctaccacctgaaatgccgattttgattgatttccatgctctgaaa
gacatccttgggcccccgatgtatgaaatggaggttgttggtgtggccgcacttcttgca
gcagttgactgcatgggggcgcaggcgagcacagctcttgtggcacatcatcttcttgca
gttgtatttctgggcaaggtatctcagcgtttgagtcagccaggagtagcaataggtttg
gcttggactcccttaggtggagaaatcatgttcgtggaggcgagtcgaatggatggcgag
ggccagttaactctgaccggccagctcggggacgtgatgaaggagtccgcccacctcgct
atcagctggctccgcagcaacgcaaagaagtaccagctgaccaatgcttttggaagtttt
gatcttcttgacaacacagacatccatctgcacttcccagctggagctgtcacaaaagat
ggaccatctgctggagttaccatagtaacctgtctcgcctcactttttagtgggcggctg
gtacgttcagatgtagccatgactggagaaattacactgagaggtcttgttcttccagtg
ggtggaattaaagacaaagtgctggcggcacacagagcgggactgaagcaagtcattatt
cctcggagaaatgaaaaagaccttgagggaatcccaggcaacgtacgacaggatttaagt
tttgtcacagcaagctgcctggatgaggttcttaatgcagcttttgatggtggctttact
gtcaagaccagacctgtggtccctgtgaaccttacctcaaaccatgcatctggggcagag
atccttacttgcttggtggttacaaatgcaaatacagtgaagaatgtcatctttgtgatt
gttcctgaaatagttcacgagaaatccatgaccgtaaagtactgtgatagtgatgtctac
cactgtgagcttccagtactaggtgattggtctgcattcacagtgaccaaaatcagctat
gtggccaggtaa

>gi568815582r:48261583_48462428|GENSCAN_predicted_peptide_2|282_aa
MSRQTATALPTGTSKCPPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPILQCQSGHL
VCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEEL
CEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVM
MQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATP
RSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC

>gi568815582r:48261583_48462428|GENSCAN_predicted_CDS_2|849_bp
atgagccgtcagactgctacagcattacctaccggtacctcgaagtgtccaccatcccag
agggtgcctgccctgactggcacaactgcatccaacaatgacttggcgagtctttttgag
tgtccagtctgctttgactatgtgttaccgcccattcttcaatgtcagagtggccatctt
gtttgtagcaactgtcgcccaaagctcacatgttgtccaacttgccggggccctttggga
tccattcgcaacttggctatggagaaagtggctaattcagtacttttcccctgtaaatat
gcgtcttctggatgtgaaataactctgccacacacagaaaaagcagaccatgaagagctc
tgtgagtttaggccttattcctgtccgtgccctggtgcttcctgtaaatggcaaggctct
ctggatgctgtaatgccccatctgatgcatcagcataagtccattacaaccctacaggga
gaggatatagtttttcttgctacagacattaatcttcctggtgctgttgactgggtgatg
atgcagtcctgttttggctttcacttcatgttagtcttagagaaacaggaaaaatacgat
ggtcaccagcagttcttcgcaatcgtacagctgataggaacacgcaagcaagctgaaaat
tttgcttaccgacttgagctaaatggtcataggcgacgattgacttgggaagcgactcct
cgatctattcatgaaggaattgcaacagccattatgaatagcgactgtctagtctttgac
accagcattgcacagctttttgcagaaaatggcaatttaggcatcaatgtaactatttcc
atgtgttga

>gi568815582r:48261583_48462428|GENSCAN_predicted_peptide_3|311_aa
MTPFSIRDLSILRFWYGEGGPRTNPRIPRIECSSNAKESEYHLPLTLLNGVQRRWSSLSR
HEKSGHALRFPQEVKEQAPPGLFLLLSTEDPNSRLRSGSKYHLLLRSTSYRGGERKPFHP
QEATTPPSTSNLPQHFHQFKIRWNHAIFGRSEQSNIGSFLWFRSKSYSVSGKCVATLALR
SRKLLEDKLFKYKGNNQEKERGYNKQKTASRRKQSHSLAFTQRSYKLMATQKPANGRLQQ
LYSELPRLRSQPRHPSVGLEVDTVVTPILQIRKAKHREVSAQGHKPVEQDLTQSRQSDFT
ARALNIQLLKS

>gi568815582r:48261583_48462428|GENSCAN_predicted_CDS_3|936_bp
atgacaccattttctatcagggacttgagcatcctcaggttttggtatggagaagggggt
cctagaactaatccgaggataccgcggattgaatgtagttccaatgccaaagaatcagag
tatcaccttccattaactcttcttaatggagtacagagaaggtggagtagcctttcccgt
catgagaagtcaggccacgcattgcgtttcccccaagaagtaaaggaacaggcccctcct
gggctctttctgctcctaagcacagaagacccaaattcgcgtctgaggtcaggatccaaa
taccatttacttctcagaagcaccagttacagaggtggagaaaggaagcctttccatccc
caggaggcaaccacacctccctcgacatcgaaccttcctcagcatttccaccagtttaaa
attaggtggaaccacgctattttcggtaggtcagaacagtcgaatatcggcagtttctta
tggtttcgatctaagagctacagcgtatctgggaaatgcgtggccacactggcgctacgc
tccaggaagctcctggaagataagctcttcaaatacaagggaaataaccaagaaaaagaa
cggggttacaataaacagaagactgcatctaggagaaagcaatcacattccttggcattt
acccaaaggagttacaaactcatggccacacaaaaacctgcaaatggacgtttacagcag
ctttattcagaattgccaagacttcgaagccaaccaagacatccttcagtagggcttgag
gtagatactgtcgttacacccattttgcagataaggaaagcgaagcacagagaagtatct
gcccaaggtcacaaaccagtggagcaggatttgacccaaagcagacagtcggacttcaca
gcccgtgctctcaacatccaactgctgaagagttaa

>gi568815582r:48261583_48462428|GENSCAN_predicted_peptide_4|121_aa
MTLNEHAAFKHLFNKAHLALPLIHLTVSGHSTCFREHRVGGLKRLDGLIQKIQENFPISG
SAQQQLDVICNLNTPLAVSLPPYEIVTMVSPTAQRIEQIQRAQKLHKSDGFLRLRELPSG
K

>gi568815582r:48261583_48462428|GENSCAN_predicted_CDS_4|366_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcactg
cccttgatccatttaaccgtgagtggacacagcacatgtttcagagagcaccgggttgga
ggactcaaaagattagatgggctcatccagaaaattcaggagaactttcccatttcaggg
tcagctcagcagcaacttgatgtcatctgcaaccttaatacccctttggcagtatcatta
ccaccctatgagatagtcaccatggtcagccccactgcacagagaatagaacagatccag
cgagctcagaagctgcacaagtcagatggattccttaggctcagggaacttccatctggg
aagtaa

>gi568815582r:48261583_48462428|GENSCAN_predicted_peptide_5|226_aa
MKIRSQKYKHMQMWKRDSADTNPCGECPWMHMGNNKSRSQMPYWRSGSGDSKMTTQSLLR
GIHSSETRQRPSSSKPGQGCFLGSQQPGDSSCKKILEHLFCSQRYSKWNQRQVEHLCLQL
KKLETQKGEVSHKVYFLIHLEITITIVTIAASMECRGVAVTQRSFQHSGLGLIIPVLQSQ
RGRVACQVTQQEVAQLGTELSSVELQSRMPTVKRAIKVAETLSLPS

>gi568815582r:48261583_48462428|GENSCAN_predicted_CDS_5|681_bp
atgaaaatcagatcccagaagtacaagcacatgcagatgtggaagcgtgacagtgccgat
acgaatccctgtggagagtgcccgtggatgcatatggggaataataagagtaggtctcaa
atgccctattggaggtcaggctctggagattccaagatgaccacacaatccctcctccgt
ggaattcacagttctgagacaagacagagaccaagcagctccaagccggggcaagggtgc
ttcttgggaagccagcagccaggagactcctcttgcaagaagatcctggaacatctcttc
tgttcacagagatattccaagtggaaccaaagacaagtcgagcacctttgtttacagctg
aagaaactggaaacccagaaaggggaagtttcacacaaggtctacttcctcatccactta
gagatcacaataacaatagtcacaattgctgcctcaatggagtgcaggggagtggcagtc
actcaaagatccttccaacactctggcctgggcttgatcatccctgttctccagagtcag
agaggacgagtggcttgtcaggtcacacagcaggaagtagcccagcttggcacagaactc
agttctgtggaacttcaaagcaggatgccaacagttaagagggctataaaggtggcagag
acactgtctttgccctcatga

>gi568815582r:48261583_48462428|GENSCAN_predicted_peptide_6|333_aa
MCHGAGLVFTFLPIQVPETGAAFLRDIGVCGSEIGICSSCLPPDNFGEWLCIIYGSKPFC
GSDSCQTTLTSMGRALTGSPAMVLAAATNTGFWASSPQPWSKKLPAGAKLCSSLSRSAFH
PSIIYVSIRGAPGRGQLETAPSKTRQTARWVARVQEQVLATQRETHTKNPQGKRKRNIYP
NGNDQAMPKEKSEQTVRDTERRAIREDFSEEGHRKEYGSLRRRKTSEMTETEALKTAGLK
VRLEVREGLAELEREQPVKEGQELTARRSGRPGPSRQGSCVDNARKAATAYLFRQVQIWI
GSGVRRTVEKQIGLERSTRPRGQGEVLTRGSDQ

>gi568815582r:48261583_48462428|GENSCAN_predicted_CDS_6|1002_bp
atgtgccacggtgctggactggtctttacttttcttccaatccaagttccagaaacagga
gctgcctttctccgagatataggtgtttgtggttcagagattgggatctgttcttcctgc
ttaccacctgacaactttggagagtggctgtgtatcatctatggttccaagcccttctgt
ggctctgactcctgccagacaaccctcacctccatggggcgagctctcacgggcagccct
gccatggttctagctgctgccaccaacactggcttctgggcttcatctcctcaaccttgg
agtaagaagcttcctgctggtgctaagctgtgttcctcactatcccgttcagcctttcat
ccttccattatctatgtttccatcaggggtgctcccggcagggggcagctggaaactgcc
ccaagcaagactcgccaaacagcaagatgggtggcaagggtccaggaacaggttttggca
acacagagggaaacacatactaaaaacccacagggtaaaaggaagaggaacatttatcca
aatggaaatgaccaagccatgcctaaggagaagagtgagcaaaccgtcagagacacagaa
aggagggctatcagggaagacttctcagaggagggacataggaaagaatatggctcccta
agaaggagaaagacaagtgaaatgacagaaacagaggcattgaaaacagcagggctcaaa
gttaggctggaggtcagggagggcctcgcagaactggagcgtgagcagcctgtgaaggaa
ggacaggaactcactgcccggcgatcaggacggccagggccttccaggcaggggagctgt
gtggacaacgcaaggaaggcggcaactgcgtatctgttcaggcaggtgcaaatatggatt
ggtagtggggtaaggaggaccgtggagaaacagatcgggctggagaggtcaaccaggcct
cgtggccagggagaagttctgacccgggggtctgatcaataa

>gi568815582r:48261583_48462428|GENSCAN_predicted_peptide_7|127_aa
MASTSQGHCLWAGAPGGFLEEDWGKKGLCLEAVMTLESLDGRNSQEPPAPSWQRCRLGLR
LCSESPGAQKAHVGAFPKSRGRTTSLFGESSSMVTANTAGLRDQRTLDKSEGTTLLTSDT
RNEFDFV

>gi568815582r:48261583_48462428|GENSCAN_predicted_CDS_7|384_bp
atggccagcacatcccaggggcactgtctgtgggctggggctccagggggcttcctggag
gaggactgggggaaaaaggggctctgtttggaagctgtgatgacccttgagagtcttgat
ggacgcaacagccaagagcccccagctcccagttggcagaggtgcaggctggggctgagg
ctgtgctcagagtcccctggtgcccagaaggcacatgtgggtgcttttcccaaaagccgg
ggtagaaccacctctctctttggagaaagttcttccatggtaactgctaacacagcaggg
ctcagggatcagcggaccctcgacaaaagtgaagggaccactcttctgacttccgacacc
agaaatgagtttgattttgtttga