Result of FASTA (ccds) for pF1KB5273
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5273, 132 aa
  1>>>pF1KB5273 132 - 132 aa - 132 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0268+/-0.000911; mu= 11.7052+/- 0.055
 mean_var=52.1211+/-10.171, 0's: 0 Z-trim(103.3): 21  B-trim: 27 in 1/51
 Lambda= 0.177651
 statistics sampled from 7326 (7346) to 7326 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.226), width:  16
 Scan time:  1.390

The best scores are:                                      opt bits E(32554)
CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8            ( 132)  838 222.6 5.7e-59
CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8           ( 132)  587 158.2 1.3e-39
CCDS342.1 FABP3 gene_id:2170|Hs108|chr1            ( 133)  559 151.0 1.9e-37
CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8       ( 140)  554 149.8 4.9e-37
CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6           ( 132)  512 139.0 8.1e-34
CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8           ( 135)  499 135.7 8.3e-33
CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6          ( 166)  488 132.9 7.1e-32
CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15        ( 137)  315 88.5 1.3e-18
CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1          ( 138)  309 87.0 3.9e-18
CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3            ( 197)  305 86.0 1.1e-17
CCDS109.1 RBP7 gene_id:116362|Hs108|chr1           ( 134)  301 84.9 1.6e-17
CCDS3109.1 RBP2 gene_id:5948|Hs108|chr3            ( 134)  268 76.5 5.5e-15
CCDS8574.1 RBP5 gene_id:83758|Hs108|chr12          ( 135)  265 75.7 9.4e-15
CCDS46925.1 RBP1 gene_id:5947|Hs108|chr3           ( 153)  245 70.6 3.7e-13
CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4           ( 132)  243 70.1 4.6e-13
CCDS46926.1 RBP1 gene_id:5947|Hs108|chr3           ( 157)  243 70.1 5.4e-13


>>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8                 (132 aa)
 initn: 838 init1: 838 opt: 838  Z-score: 1172.1  bits: 222.6 E(32554): 5.7e-59
Smith-Waterman score: 838; 100.0% identity (100.0% similar) in 132 aa overlap (1-132:1-132)

               10        20        30        40        50        60
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
               70        80        90       100       110       120

              130  
pF1KB5 KGVVCTRIYEKV
       ::::::::::::
CCDS62 KGVVCTRIYEKV
              130  

>>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8                (132 aa)
 initn: 585 init1: 571 opt: 587  Z-score: 824.5  bits: 158.2 E(32554): 1.3e-39
Smith-Waterman score: 587; 67.2% identity (88.5% similar) in 131 aa overlap (1-131:1-131)

               10        20        30        40        50        60
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
       : . :.:::::::::::::::: .:::.::::....:::..::: .::.:::..::::::
CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
       ::::: :::::.:.:::.::.:: .::. : : .::.:::: ::::::  . :.:.:: :
CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVECVM
               70        80        90       100       110       120

              130  
pF1KB5 KGVVCTRIYEKV
       :::. ::.::. 
CCDS62 KGVTSTRVYERA
              130  

>>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1                 (133 aa)
 initn: 559 init1: 559 opt: 559  Z-score: 785.6  bits: 151.0 E(32554): 1.9e-37
Smith-Waterman score: 559; 63.4% identity (88.5% similar) in 131 aa overlap (1-131:1-131)

               10        20        30        40        50        60
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
       : . ::::::::.:.:::::::.::::.:::......:::.:: :.:::.:..:.:::::
CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
       :::::::: ::.:::::.::.::::::. :.: ..:.:::.:::. :.:..::..     
CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTH
               70        80        90       100       110       120

              130   
pF1KB5 KGVVCTRIYEKV 
         .:::: :::  
CCDS34 GTAVCTRTYEKEA
              130   

>>CCDS47882.1 FABP12 gene_id:646486|Hs108|chr8            (140 aa)
 initn: 554 init1: 554 opt: 554  Z-score: 778.4  bits: 149.8 E(32554): 4.9e-37
Smith-Waterman score: 554; 65.9% identity (82.6% similar) in 132 aa overlap (1-132:1-132)

               10        20        30        40        50        60
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
       : ... :::: .: :: .:::: ::.: :.:::: :::::: ::  ::.:::.:.: :::
CCDS47 MIDQLQGTWKSISCENSEDYMKELGIGRASRKLGRLAKPTVTISTDGDVITIKTKSIFKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
       .:::::::.:::: :  ..:::: :::.. :: ::: :::::::: ::::.::::.:  .
CCDS47 NEISFKLGEEFEEITPGGHKTKSKVTLDKESLIQVQDWDGKETTITRKLVDGKMVVESTV
               70        80        90       100       110       120

              130          
pF1KB5 KGVVCTRIYEKV        
       ..:.::: ::::        
CCDS47 NSVICTRTYEKVSSNSVSNS
              130       140

>>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6                (132 aa)
 initn: 512 init1: 512 opt: 512  Z-score: 720.6  bits: 139.0 E(32554): 8.1e-34
Smith-Waterman score: 512; 59.5% identity (85.5% similar) in 131 aa overlap (1-131:1-131)

               10        20        30        40        50        60
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
       : . : .::::..:.:::.::::::::.:::..::..:::::::..:: ..::: :::::
CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
       :::::.::.::.:::::.:. ::.:.:.  .: ..:.::::::.. :.. .::::    .
CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMTLTF
               70        80        90       100       110       120

              130  
pF1KB5 KGVVCTRIYEKV
         :: .: ::: 
CCDS51 GDVVAVRHYEKA
              130  

>>CCDS6228.1 FABP5 gene_id:2171|Hs108|chr8                (135 aa)
 initn: 499 init1: 499 opt: 499  Z-score: 702.4  bits: 135.7 E(32554): 8.3e-33
Smith-Waterman score: 499; 58.7% identity (84.1% similar) in 126 aa overlap (7-132:9-134)

                 10        20        30        40        50        
pF1KB5   MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTF
               : :.::.:..::.::: ::::.: ::.: .:::  ::.  :  .::.::::.
CCDS62 MATVQQLEGRWRLVDSKGFDEYMKELGVGIALRKMGAMAKPDCIITCDGKNLTIKTESTL
               10        20        30        40        50        60

       60        70        80        90       100       110        
pF1KB5 KNTEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAEC
       :.:..:  ::..:::::::.:::... ..  :.: : :.:::::.:: ::: .::.:.::
CCDS62 KTTQFSCTLGEKFEETTADGRKTQTVCNFTDGALVQHQEWDGKESTITRKLKDGKLVVEC
               70        80        90       100       110       120

      120       130   
pF1KB5 KMKGVVCTRIYEKV 
        :..:.:::::::: 
CCDS62 VMNNVTCTRIYEKVE
              130     

>>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6               (166 aa)
 initn: 488 init1: 488 opt: 488  Z-score: 685.7  bits: 132.9 E(32554): 7.1e-32
Smith-Waterman score: 488; 62.6% identity (90.4% similar) in 115 aa overlap (1-115:1-115)

               10        20        30        40        50        60
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN
       : . : .::::..:.:::.::::::::.:::..::..:::::::..:: ..::: :::::
CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 TEISFKLGQEFEETTADNRKTKSIVTLQRGSLNQVQRWDGKETTIKRKLVNGKMVAECKM
       :::::.::.::.:::::.:. ::.:.:.  .: ..:.::::::.. :.. .::::     
CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLVHIQKWDGKETNFVREIKDGKMVMVSND
               70        80        90       100       110       120

              130                                    
pF1KB5 KGVVCTRIYEKV                                  
                                                     
CCDS83 NSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM
              130       140       150       160      

>>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15             (137 aa)
 initn: 318 init1: 150 opt: 315  Z-score: 447.5  bits: 88.5 E(32554): 1.3e-18
Smith-Waterman score: 315; 43.7% identity (68.1% similar) in 135 aa overlap (1-129:1-134)

               10        20        30          40        50        
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLA--KPTVIISKKGDIITIRTESTF
       : : : ::::. ::::::. .:::::.   ::..  :  :: : : . :: . :.: .: 
CCDS10 MPN-FAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTV
                10        20        30        40        50         

       60        70        80         90          100       110    
pF1KB5 KNTEISFKLGQEFEETTADNRKTKSIVTLQ-RGSLNQVQRW---DGKETTIKRKLVNGKM
       ..:::.::.:. ::: :.:.:: .:..: . ..... .:     :: .:   :.:.: ..
CCDS10 RTTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDEL
      60        70        80        90       100       110         

          120       130  
pF1KB5 VAECKMKGVVCTRIYEKV
       .       :::::::   
CCDS10 ILTFGADDVVCTRIYVRE
     120       130       

>>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1               (138 aa)
 initn: 292 init1: 162 opt: 309  Z-score: 439.1  bits: 87.0 E(32554): 3.9e-18
Smith-Waterman score: 309; 39.7% identity (69.9% similar) in 136 aa overlap (1-129:1-135)

               10        20        30          40        50        
pF1KB5 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLA--KPTVIISKKGDIITIRTESTF
       : : : :.::.. ::::.. .:.:::..  ::..  :  ::.: :...:: . :.: .: 
CCDS11 MPN-FSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTV
                10        20        30        40        50         

       60        70        80        90           100       110    
pF1KB5 KNTEISFKLGQEFEETTADNRKTKSIVTLQRGSL----NQVQRWDGKETTIKRKLVN-GK
       ..:::.::.:.:::: :.:.:  ::.:  .  .     ... . .: .:.  :.:.: :.
CCDS11 RTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGE
      60        70        80        90       100       110         

           120       130  
pF1KB5 MVAECKMKGVVCTRIYEKV
       ..       :::::.:   
CCDS11 LILTMTADDVVCTRVYVRE
     120       130        

>>CCDS3110.2 RBP1 gene_id:5947|Hs108|chr3                 (197 aa)
 initn: 247 init1: 230 opt: 305  Z-score: 431.1  bits: 86.0 E(32554): 1.1e-17
Smith-Waterman score: 305; 39.3% identity (68.1% similar) in 135 aa overlap (1-132:63-196)

                                             10        20        30
pF1KB5                               MSNKFLGTWKLVSSENFDDYMKALGVGLAT
                                     :   : : ::.. .:::..:..:: :..: 
CCDS31 HHPRSTGSRCPGSLQPSRPLVANWLQSLPEMPVDFTGYWKMLVNENFEEYLRALDVNVAL
             40        50        60        70        80        90  

               40        50        60        70          80        
pF1KB5 RKLGNLAKPTVIISKKGDIITIRTESTFKNTEISFKLGQEFEE--TTADNRKTKSIVTLQ
       ::..:: ::   : . :: . ::: :::.:  ..:..:.::::  :  :.::  . :. .
CCDS31 RKIANLLKPDKEIVQDGDHMIIRTLSTFRNYIMDFQVGKEFEEDLTGIDDRKCMTTVSWD
            100       110       120       130       140       150  

       90       100       110        120       130   
pF1KB5 RGSLNQVQRWDGKETTIKRKLVNG-KMVAECKMKGVVCTRIYEKV 
         .:. ::. . ::     . ..: ..  : ...:::: ....:: 
CCDS31 GDKLQCVQKGE-KEGRGWTQWIEGDELHLEMRVEGVVCKQVFKKVQ
            160        170       180       190       




132 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:23:01 2016 done: Sat Nov  5 12:23:01 2016
 Total Scan time:  1.390 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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