GENSCAN 1.0	Date run:  8-Nov-116	Time: 05:13:06

Sequence gi568815594r:138958986_139184190 : 225205 bp : 41.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2256   2277   22  2  1   92   63    34 0.142   1.39
 1.02 Intr +  14688  14770   83  1  2   34   78    90 0.197   1.04
 1.03 Intr +  33444  33558  115  2  1   12   34   216 0.008   7.70
 1.04 Intr +  37327  37387   61  2  1   50   87    56 0.002  -1.43
 1.05 Intr +  40622  40785  164  2  2    7   74   147 0.009   3.90
 1.06 Term +  54800  54906  107  0  2   69   47   105 0.039   2.09
 1.07 PlyA +  55095  55100    6                               1.05

 2.00 Prom +  55193  55232   40                              -6.95
 2.01 Init +  56997  57186  190  2  1   59  109   155 0.002  11.92
 2.02 Intr +  84089  84358  270  0  0   79   91   239 0.764  19.89
 2.03 Term +  85654  86489  836  2  2   80   36   638 0.998  49.96
 2.04 PlyA +  87164  87169    6                               1.05

 3.08 PlyA -  87289  87284    6                               1.05
 3.07 Term - 100622  99998  625  1  1   89   38   524 0.979  40.37
 3.06 Intr - 101689 101339  351  0  0  115  115   348 0.999  33.71
 3.05 Intr - 103072 102880  193  2  1   82   83    78 0.924   4.33
 3.04 Intr - 108785 108699   87  0  0   61   86    51 0.669   1.22
 3.03 Intr - 113054 112881  174  0  0   76   75   164 0.884  12.89
 3.02 Intr - 114582 114469  114  1  0   69   84    99 0.967   7.10
 3.01 Init - 118072 118003   70  1  1   55   59   100 0.927   5.06
 3.00 Prom - 123066 123027   40                              -6.25

 4.00 Prom + 123525 123564   40                              -8.55
 4.01 Init + 124622 125249  628  1  1   45   58   433 0.957  31.55
 4.02 Term + 129618 129673   56  1  2  120   42    60 0.466   1.34
 4.03 PlyA + 130171 130176    6                               1.05

 5.04 PlyA - 130237 130232    6                               1.05
 5.03 Term - 156327 155945  383  1  2   35   55   557 0.482  41.12
 5.02 Intr - 166344 166179  166  0  1   70   74   261 0.997  21.51
 5.01 Init - 168133 168128    6  1  0   50  121    10 0.780   0.86
 5.00 Prom - 172438 172399   40                              -5.65

 6.00 Prom + 174836 174875   40                              -6.05
 6.01 Init + 185089 185167   79  0  1   71   98    69 0.558   7.47
 6.02 Intr + 186201 186341  141  1  0   31   46   119 0.049   1.40
 6.03 Intr + 217124 217363  240  0  0  115  121   183 0.977  20.90
 6.04 Intr + 218564 218670  107  0  2   91   39    39 0.841  -1.69
 6.05 Intr + 218801 218928  128  1  2   54   81    70 0.860   1.46
 6.06 Intr + 219087 219487  401  0  2   60  -12   340 0.381  14.42
 6.07 Term + 219656 219792  137  0  2  102   44   101 0.544   4.30
 6.08 PlyA + 220792 220797    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  37103  36927  177  0  0   73  115    45 0.825   4.67
S.002 Sngl -  57123  56626  498  0  0   69   44   291 0.981  16.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:138958986_139184190|GENSCAN_predicted_peptide_1|183_aa
MTPVPRKSHILVLLVRSVHDLIAVHGYFPDNRSPEEKEEERRRRKEGEEGEEEMKEKKKR
KKREEEEEEGGGGGTTASGSFSPVVLDKLLPRKLRQQNTPKKAEGLRAYLTEKTVASRAS
QSAKPGVRVVSSLQVSPAGRRPSGTLENSQDEVEVPLSGYNPNPPKGTIVFSSPPCKTKN
VTT

>gi568815594r:138958986_139184190|GENSCAN_predicted_CDS_1|552_bp
atgaccccggtccctcgcaagagtcacatcctggtgttgctagtcagatcggtgcacgat
cttattgctgttcatggttatttccctgataatcgctccccagaggaaaaagaagaagaa
agaagaagaagaaaagaaggggaagaaggggaggaggagatgaaggagaagaagaagagg
aagaagagggaggaggaggaggaagaaggaggaggaggaggcactacagccagcggtagc
ttctccccagttgttctagacaagctccttccaaggaagctgagacagcaaaacactcct
aagaaggctgaagggctgagagcctaccttacagagaaaacagtggctagcagagcttca
caaagcgccaaaccaggagttcgggtcgtgtcgtctttgcaggtgtcgccagctggaaga
agacctagtggcactcttgaaaactcacaggatgaagttgaagttcctttatctggctac
aatccgaacccaccaaaaggaacaattgttttttcttcccctccttgtaagaccaaaaat
gtaaccacctga

>gi568815594r:138958986_139184190|GENSCAN_predicted_peptide_2|431_aa
MFHSPRRLCSALLQRDAPGLRRLPAPGLRRPLSPPAAVPRPASPRLLAAASAASGAARSC
SRTVCSMGTGTSRLYSALAKTLNSSAASQHPEYLVSPDPEHLEPIDPKELLEECRAVLHT
RPPRFQRDFVDLRTDCPSTHPPIRVMQWNILAQALGEGKDNFVQCPVEALKWEERKCLIL
EEILAYQPDILCLQEVDHYFDTFQPLLSRLGYQGTFFPKPWSPCLDVEHNNGPDGCALFF
LQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLKARTGWERFRSAQ
GCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAYKLLSADGQSEPP
YTTWKIRTSGECRHTLDYIWYSKHALNVRSALDLLTEEQIGPNRLPSFNYPSDHLSLVCD
FSFTEESDGLS

>gi568815594r:138958986_139184190|GENSCAN_predicted_CDS_2|1296_bp
atgtttcatagtccgcggcggctctgctcggccctgctgcagagggacgcgcccggcctg
cgccgcctgcccgccccagggctgcgccgcccgttgtccccgccggctgctgttcccagg
cccgcatccccccggctgctggcggcggcctcggcggcctcgggcgccgcgaggtcgtgt
tcccgaacagtgtgttccatgggaaccggtacaagcagactctatagtgctctcgccaag
acactgaacagcagcgctgcctcccagcacccagagtatttggtgtcacctgacccagag
catctggagcccattgatcctaaagagcttcttgaggaatgcagggccgtcctgcacacc
cgacctccccggttccagagggattttgtggatctgaggacagattgccctagtacccac
ccacctatcagggttatgcaatggaacatcctcgcccaagctcttggagaaggcaaagac
aactttgtacagtgccctgttgaagcactcaaatgggaagaaaggaaatgtctcatcctg
gaagaaatcctggcctaccagcctgatatattgtgcctccaagaggtggaccactatttt
gacaccttccagccactcctcagtagactaggctatcaaggcacgtttttccccaaaccc
tggtcaccttgtctagatgtagaacacaacaatggaccagatggttgtgccttatttttt
cttcaaaaccgattcaagctagtcaacagtgccaatattaggctgacagccatgacattg
aaaaccaaccaggtggccattgcacagaccctggagtgcaaggagtcaggccgacagttc
tgcatcgctgttacccatctaaaagcacgcactggctgggagcggtttcgatcagctcaa
ggctgtgacctccttcagaacctgcaaaacatcacccaaggagccaagattccccttatt
gtgtgtggggacttcaatgcagagccaacagaagaggtctacaaacactttgcttcctcc
agcctcaacctgaacagcgcctacaagctgctgagtgctgatgggcagtcagaaccccca
tacactacctggaagatccggacctcaggggagtgcaggcacaccctggattacatctgg
tattctaaacatgctctaaatgtaaggtcagctctcgatctgctcactgaagaacagatt
ggacccaacaggttaccttccttcaattatccttcagaccacctgtctctagtgtgtgac
ttcagctttactgaggaatctgatggactttcataa

>gi568815594r:138958986_139184190|GENSCAN_predicted_peptide_3|537_aa
MVNVSNDLSVVRRVLDLLADNFIVEASVHSSNAHCTDKTIEAAEALLHMESPTCLRDSRS
PVEVFVPPCVSTPEFIHAAMRPDVITETVVEVSTEESEPMDTSPIPTSPDSHEPMKKKKV
GRKPKTQQSPISNGSPELGIKKKPREGKGNTTYLWEFLLDLLQDKNTCPRYIKWTQREKG
IFKLVDSKAVSKLWGKHKNKPDMNYETMGRALRYYYQRGILAKVEGQRLVYQFKDMPKNI
VVIDDDKSETCNEDLAGTTDEKSLERVSLSAESLLKAASSVRSGKNSSPINCSRAEKGVA
RVVNITSPGHDASSRSPTTTASVSATAAPRTVRVAMQVPVVMTSLGQKISTVAVQSVNAG
APLITSTSPTTATSPKVVIQTIPTVMPASTENGDKITMQPAKIITIPATQLAQCQLQTKS
NLTGSGSINIVGTPLAVRALTPVSIAHGTPVMRLSMPTQQASGQTPPRVISAVIKGPEVK
SEAVAKKQEHDVKTLQLVEEKPADGNKTVTHVVVVSAPSAIALPVTMKTEGLVTCEK

>gi568815594r:138958986_139184190|GENSCAN_predicted_CDS_3|1614_bp
atggtaaatgtcagcaacgatttgtcagttgtacgtagagtattagatcttctggctgat
aacttcatagtggaagcatcagttcacagcagtaatgcacactgtacagataagacaatt
gaagctgctgaagccctgcttcatatggaatctcctacctgcttgagggattcaagaagt
cctgtggaagtgtttgttcctccttgtgtatcaactccagaattcatccatgctgctatg
aggccagatgtcattacagaaactgtagtggaggtgtcaactgaagagtctgaacccatg
gatacctctcctattccaacatcaccagatagccatgaaccaatgaaaaagaaaaaagtt
ggccgtaaaccaaagacccagcaatcaccaatttccaatgggtctcctgagttaggtata
aagaagaaaccaagagaaggaaaaggaaacacaacctatttgtgggagtttcttttagat
ctacttcaagataaaaatacttgtcccaggtatattaaatggactcagagagaaaaaggc
atattcaagctggtggattcaaaggctgtctctaagctttggggaaagcataagaacaaa
ccagacatgaactatgaaaccatgggacgagctttgagatactactaccaaaggggaatt
cttgcaaaggttgaaggacagaggcttgtatatcagttcaaggatatgccgaaaaacata
gtggtcatagatgatgacaaaagtgaaacctgtaatgaagatttagcaggaactactgat
gaaaaatcattagaacgagtgtcactgtctgcagaaagtctcctgaaagcagcatcctct
gttcgcagtggaaaaaattcatcccctataaactgctccagagcagagaagggtgtagct
agagttgtgaatatcacttcccctgggcacgatgcttcatccaggtctcctactaccact
gcatctgtgtcagcaacagcagctccaaggacagttcgtgtggcaatgcaggtacctgtt
gtaatgacatcattgggtcagaaaatttcaactgtggcagttcagtcagttaatgcaggt
gcaccattaataaccagcactagtccaacaacagcgacctctccaaaggtagtcattcag
acaatccctactgtgatgccagcttctactgaaaatggagacaaaatcaccatgcagcct
gccaaaattattaccatcccagctacacagcttgcacagtgtcaactgcagacaaagtca
aatctgactggatcaggaagcattaacattgttggaaccccattggctgtgagagcactt
acccctgtttcaatagcccatggtacacctgtaatgagactatcaatgcctactcagcag
gcatctggccagactcctcctcgagttatcagtgcagtcataaaggggccagaggttaaa
tcggaagcagtggcaaaaaagcaagaacatgatgtgaaaactttgcagctagtagaagaa
aaaccagcagatggaaataagacagtgacccacgtagtggttgtcagtgcgccttcagct
attgcccttcctgtaactatgaaaacagaaggactagtgacatgtgagaaataa

>gi568815594r:138958986_139184190|GENSCAN_predicted_peptide_4|227_aa
MRKSWNCGRSLKGEPSGGGERSPEKPAAPERGQQRPLRPDSVAGAAERQQPHSLPGSSAT
GVKRTTRPPPSAQLNRGSVLQHPLPALSPAAAAAARRTHPEATAPDSRQVTLQGDHFLIR
RLHYFIHSPLSPSRPSDCEVDTVPPAQTATGESPRLLCTPSPAAPMHGRKVPLSLPARMS
RSSWFVGPSCRDVAMFIPGLELLLHIDLHLVFTHFYTTVKCDCLPKV

>gi568815594r:138958986_139184190|GENSCAN_predicted_CDS_4|684_bp
atgcggaagtcatggaattgtggacgaagtctgaagggagaaccgagcgggggtggcgag
cgttcgccggagaagcccgccgcccccgaacgcgggcagcagcggcctctccggccagac
agcgtggcaggcgcagccgagagacaacagcctcactcacttcctggttcctcagcaact
ggggtgaagcgcacaactcgtccgcccccgagtgcccaacttaaccgcggctccgttctc
cagcacccgctgccagcgctcagcccggcagctgctgctgctgctcgccgaacccaccct
gaagcgacagcgccggattcgaggcaggttactctccaaggtgatcacttcctgattcgt
cgcctccattacttcattcactcccccctttcccccagccgccccagtgactgtgaggtg
gacactgtacccccagcacagactgctacaggggagtcaccccgccttctgtgcaccccc
tctcctgctgcaccgatgcacgggagaaaagttcccctgtccttaccggcccggatgagc
agatccagctggttcgtgggtccctcatgcagagacgtcgccatgtttatcccggggctg
gagctgctgcttcacattgacttacaccttgtcttcacccacttctacacaaccgttaaa
tgtgactgtttgcctaaagtatga

>gi568815594r:138958986_139184190|GENSCAN_predicted_peptide_5|184_aa
MKESEKVSEYPAVIVEPVPSARLEQGYAAQVLVYDDETYMMQDVAEEQEVETENVETVAA
QDHASTFRAPPGTAGEGPGGADDEGPVRRQGKVTVKYDRKELRKRLNLEEWILEQLTRLY
DCQEEEIPELEIDVDELLDMESDDARAATVKELLVDCYKPTEAFISGLLDKIRGMQKLST
PQKK

>gi568815594r:138958986_139184190|GENSCAN_predicted_CDS_5|555_bp
atgaaggaaagtgaaaaggtttctgaatatccagcagtgattgtggagccagttccaagt
gccagattagagcagggctatgcagcccaggttctggtttatgatgatgagacttatatg
atgcaagatgtggcagaagaacaagaagttgagaccgagaatgtggaaacagtggcggcc
caggaccacgcgtctactttcagagccccccccgggaccgcaggagagggcccgggcggc
gcggacgatgagggcccagtgaggcgccaagggaaggtcaccgtcaagtatgaccgcaag
gagctacggaagcgcctcaacctagaggagtggatcctggagcagctcacgcgcctctac
gactgccaggaagaggagatcccagaactggagattgacgtggatgagctcctggacatg
gagagtgacgatgcccgggctgccacggtcaaggagctgctggttgactgttacaaaccc
acagaggccttcatttctggtctgctggacaagatccggggcatgcagaagctgagcaca
ccccagaagaagtga

>gi568815594r:138958986_139184190|GENSCAN_predicted_peptide_6|410_aa
MQELNGKTETTDPLKEGAGCSLHHEPGCPESVHMTSLLILQPAFKKANALRLFTTKESHN
VCHSPVTPMRAGADHPVARSLRTSFARIQKAVTGRACYEPVFVLLKKQIPIRAKPPYLPG
NRGRWQHGAGVESENKRTAEYNLSCKLAAPGRKGKDARHLSGSLPRAPRSRSPLQPRIGA
GGSAARGRRDSRPSPETAPQSGSLTVTGGRGFAKTPSPVFPVPTPQPWLSERNYHPPNSP
AARRLVPAFAGCRVAGPSAQLRSAAGGPLELPGELRALAPSHCRSLRGPQRRSNSSLSVV
GARMRECSGVGVFWPKCLRIRKRKPSSGCTLLVSTLSHKGEPSSGALSRAFKCTKANDTV
PWVALWLLQPRRDGPGTWRGIHQLISGLQRYPFYGFTTSLEQRRNTEEYK

>gi568815594r:138958986_139184190|GENSCAN_predicted_CDS_6|1233_bp
atgcaggaacttaatggaaaaacggaaaccacagatcctttgaaagaaggggcaggctgc
agtctacaccatgagccaggatgtcctgagtctgtccacatgaccagtttattaatacta
caaccagcatttaagaaagccaacgcactacggctatttacaaccaaggaatctcacaac
gtatgtcattcccctgttacccctatgagagctggtgctgaccatcccgtcgcgcggtcc
ctgaggaccagcttcgcgaggatccagaaggcggtcactggacgtgcctgttacgagccc
gtttttgttttgcttaagaaacagattccgatccgagcaaagcctccctacctcccgggg
aatagggggagatggcagcacggtgccggcgtggagagcgagaataaaagaactgccgag
tacaacctgtcgtgcaagctagcagcgccgggaaggaaaggtaaagacgctcgtcacttg
tccggctccttgcccagggctccccgatctcgctctccactccagccccggattggtgca
gggggctctgccgcacggggcaggcgtgactctcgcccttctccggagacggccccacag
tcgggcagtctgacagttacaggggggcgaggttttgcaaaaactcctagcccggtcttt
ccagttcccactcctcagccttggcttagtgaaagaaattaccacccgcccaacagcccg
gccgcgcggcggttggtgccggcgtttgctggctgtcgggtggctgggcccagcgcgcag
ctgcggagcgcggcgggcggccccttggagctgcccggggagctgcgggcactcgcacct
agccattgtcgctccttgcgcggtccgcaacggagaagtaactcaagtctgagtgttgtt
ggtgcgagaatgagagagtgttctggtgtgggagtattttggcccaagtgcctgcgaatt
cgaaaacgaaaacccagcagtggctgcacgcttctggtttccacactttcacacaaaggg
gagccttcgagcggggcactctcacgcgccttcaagtgcacaaaagccaatgacacggtg
ccgtgggttgccctgtggctcctgcagcctcgccgcgatggacctggcacctggcgcggt
attcaccagctgatttctgggctccagcgttaccctttttacggcttcacaaccagtctg
gagcaaagaagaaacactgaggaatataagtga