GENSCAN 1.0	Date run:  6-Nov-116	Time: 23:56:17

Sequence gi568815584f:96163683_96364741 : 201059 bp : 44.26% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  10208  10266   59  1  2   76  116    43 0.978   6.93
 1.02 Intr +  10708  10807  100  1  1   47   81    74 0.960   2.71
 1.03 Intr +  12068  12382  315  1  0   64   97   124 0.865   7.16
 1.04 Intr +  15285  15398  114  2  0   78   80    28 0.613   1.64
 1.05 Intr +  20086  20234  149  0  2   72   51    96 0.017   3.33
 1.06 Intr +  25878  26023  146  0  2   56   53    81 0.005   1.33
 1.07 Intr +  43882  44038  157  2  1   46  115    95 0.049   7.07
 1.08 Intr +  50753  50871  119  2  2   56   85    19 0.024  -1.49
 1.09 Term +  52913  53184  272  0  2   35   47   258 0.802  12.05
 1.10 PlyA +  53802  53807    6                               1.05

 2.00 Prom +  57312  57351   40                              -4.66
 2.01 Sngl +  59426  59665  240  1  0   70   48   249 0.937  14.18
 2.02 PlyA +  60591  60596    6                               1.05

 3.00 Prom +  70670  70709   40                              -4.56
 3.01 Init +  71131  71177   47  0  2   85   40    73 0.031   2.36
 3.02 Intr +  76721  77818 1098  2  0  102   53  1931 0.003 180.05
 3.03 Intr +  82197  82249   53  0  2   -9   73   168 0.026   4.15
 3.04 Intr +  82750  82777   28  2  1   83   80    43 0.012   0.17
 3.05 Intr +  99991 100966  976  1  1  125   47   998 0.235  90.36
 3.06 Term + 105791 105952  162  1  0   69   38   106 0.158   1.64
 3.07 PlyA + 106212 106217    6                               1.05

 4.23 PlyA - 110315 110310    6                               1.05
 4.22 Term - 122303 122073  231  2  0  124   45   174 0.994  13.17
 4.21 Intr - 126166 125974  193  0  1   43   78   146 0.337   8.59
 4.20 Intr - 128416 128347   70  2  1  123   47    66 0.301   4.24
 4.19 Intr - 131878 131800   79  1  1   71   62    45 0.246  -0.68
 4.18 Intr - 138426 138325  102  0  0   79   72    56 0.868   3.47
 4.17 Intr - 139573 139379  195  1  0   65   95    48 0.738   2.81
 4.16 Intr - 142133 141984  150  2  0   55    5   183 0.623   7.06
 4.15 Intr - 143234 143032  203  0  2   68   90   114 0.998   8.60
 4.14 Intr - 145912 145771  142  1  1   56   95   134 0.996  10.83
 4.13 Intr - 147605 147435  171  2  0   80   87    43 0.803   3.54
 4.12 Intr - 153635 153463  173  0  2   53  100    45 0.806   1.86
 4.11 Intr - 154173 154016  158  2  2   97   45    65 0.860   2.75
 4.10 Intr - 158572 158430  143  1  2   63   95    54 0.973   2.75
 4.09 Intr - 159053 158858  196  1  1   46   98   110 0.941   7.22
 4.08 Intr - 160316 160214  103  0  1   51  113    75 0.936   5.53
 4.07 Intr - 162240 161967  274  0  1   74   91   148 0.993  10.81
 4.06 Intr - 164853 164665  189  0  0   90  119    19 0.868   4.98
 4.05 Intr - 165062 164992   71  0  2   45  110   -31 0.455  -6.30
 4.04 Intr - 170191 170006  186  2  0   75   91   133 0.851  11.96
 4.03 Intr - 183659 183497  163  2  1  107   77    51 0.740   5.45
 4.02 Intr - 199391 199133  259  1  1  -30   86   249 0.575  10.37
 4.01 Intr - 200494 200188  307  2  1  107   49   197 0.752  13.21

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  50727  50871  145  2  1   71   85    49 0.811   3.18
S.002 Sngl +  76728  77822 1095  2  0   95   53  1903 0.913 184.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:96163683_96364741|GENSCAN_predicted_peptide_1|476_aa
MGQRPLQAQGSWWRLGSGERGLLGEKEDPAEETDRQRLVRQEAWRGKSFRKDKTLANASL
MAATKFAPEIEALTHWCARAPHGMRQKLGSNQTTCLAFSTCCILLPLPPFSWEYSPVNHL
SKNPTSGSALRSMNFHVPRTMMGVVVEKEPVNPVLTISMLSNTNDKSKQVVCLQSSRPAP
KLQLGETHRALDPPVQLEPGHGSDPTLITEMTKVTWRIMECHHPDKLNGSLQDCYVRARD
CKPVLTLGSQAGFSGRSDTSAKVARGPSWGRPIVSALANVEVLEGQGGADGHRTKCPSPR
VNPDENYGLWVMMMCQRRFINYNKLTALVGDVSNGGGYVCVGTGDICPPAGDNAPYPTSG
DLGSDRRPHTYSPSLSDRQSWDLNTPAWATEQDPVSTKEKEERRGRKKEEKRKKKEEEEE
GGGRRRKRKEEEEGGGGGRRRRRRKEEEEEEEEVGEEEGGGGGGDPTALFGRLWEN

>gi568815584f:96163683_96364741|GENSCAN_predicted_CDS_1|1431_bp
atgggtcagcggccgctgcaggcccaggggagctggtggcgcctgggctcaggggaaagg
ggtcttcttggcgagaaggaagatccagcagaggagacagacaggcagcggctcgtgagg
caggaagcctggagagggaagagcttccggaaagacaagaccttggccaatgccagcctc
atggctgccacaaagtttgccccggagatagaggcactaactcattggtgcgccagagcc
ccccatgggatgaggcagaagctgggctccaaccagaccacctgcttagctttttccacc
tgctgtatcctgcttcctttgccccccttttcatgggagtactccccagtaaatcatctg
agcaagaatccaacctcaggctccgctttaagatctatgaattttcatgtgccaagaacc
atgatgggggtggtggtggagaaagagccagtgaatccagtactaacaatatcgatgctg
agcaacacaaatgataaatccaagcaagttgtttgcctgcagagttcccggcctgctcca
aagttgcagctgggggaaacccacagggctctagacccacccgtgcagctggaacctgga
catggcagtgacccaactctaatcacagaaatgaccaaggtgacctggagaataatggag
tgccaccaccctgacaagctgaatggctcgctccaggactgttacgtgagagcgagagat
tgcaagccagtcctcacattgggcagtcaggcaggcttctctgggagaagtgacacttca
gccaaagtggccaggggaccgagctgggggaggcccatcgtcagtgccctagcgaatgtg
gaagtgctcgagggacagggaggggccgacggccatcgcaccaaatgtccatcaccaaga
gtgaaccctgatgaaaactatggactttgggtgatgatgatgtgtcaacgcaggttcatc
aattacaacaaattgactgctcttgtgggggatgtcagtaacgggggaggctacgtatgt
gtaggcacaggggatatatgccctcctgccggggacaatgctccttatcccacaagcggg
gacctgggctctgacaggaggccacacacttacagtccctcccttagtgaccggcagagc
tgggatttgaacacccctgcctgggcaacagagcaagatcctgtttcaacaaaagaaaaa
gaagagagaagaggaagaaagaaggaggagaagaggaagaagaaggaggaggaggaggaa
ggaggaggaaggaggaggaagaggaaggaggaggaggaaggaggaggaggaggaaggagg
aggaggaggaggaaggaggaggaggaggaggaggaggaagtaggagaagaagaaggagga
ggaggaggaggagatcctacagcactgtttggaagattatgggaaaattag

>gi568815584f:96163683_96364741|GENSCAN_predicted_peptide_2|79_aa
MSHKQIHYSDRYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHNMIH
ESEPHILLFRRPPPKKPKK

>gi568815584f:96163683_96364741|GENSCAN_predicted_CDS_2|240_bp
atgtcacacaaacaaattcactattcggacagatacgacgacgaggagtttgagtatcga
catgtcatgctgcccaaggacatagccaagctggtccctaaaacccatttgatgtctgaa
tctgaatggaggaatcttggcgttcagcagagtcagggatgggtccataatatgatccat
gaatcagaacctcacatcttgctgttccggcgcccaccacccaagaagccaaagaaatga

>gi568815584f:96163683_96364741|GENSCAN_predicted_peptide_3|787_aa
MEASEETLDTSPMTELADMLNVTLQGPTLNGTFAQSKCPQVEWLGWLNTIQPPFLWVLFV
LATLENIFVLSVFCLHKSSCTVAEIYLGNLAAADLILACGLPFWAITISNNFDWLFGETL
CRVVNAIISMNLYSSICFLMLVSIDRYLALVKTMSMGRMRGVRWAKLYSLVIWGCTLLLS
SPMLVFRTMKEYSDEGHNVTACVISYPSLIWEVFTNMLLNVVGFLLPLSVITFCTMQIMQ
VLRNNEMQKFKEIQTERRATVLVLVVLLLFIICWLPFQISTFLDTLHRLGILSSCQDERI
IDVITQIASFMAYSNSCLNPLVYVIVGKRFRKKSWEVYQGVCQKGGCRSEPIQMENSMGT
LRTSISVERQIHKLQDWAGSRHFDDDDDDDDDDDGGGVGTSWRNEKKSRSLCMASSWPPL
ELQSSNQSQLFPQNATACDNAPEAWDLLHRVLPTFIISICFFGLLGNLFVLLVFLLPRRQ
LNVAEIYLANLAASDLVFVLGLPFWAENIWNQFNWPFGALLCRVINGVIKANLFISIFLV
VAISQDRYRVLVHPMASRRQQRRRQARVTCVLIWVVGGLLSIPTFLLRSIQAVPDLNITA
CILLLPHEAWHFARIVELNILGFLLPLAAIVFFNYHILASLRTREEVSRTRCGGRKDSKT
TALILTLVVAFLVCWAPYHFFAFLEFLFQVQAVRGCFWEDFIDLGLQLANFFAFTNSSLN
PVIYVFVGRLFRTKLRPLPKKGLTAGLQSAQCSRSEVQVSESHMPLFQSSLHHRMGLADH
RNSASHL

>gi568815584f:96163683_96364741|GENSCAN_predicted_CDS_3|2364_bp
atggaggccagcgaggaaacgctggacacgtcccccatgactgagctcgccgacatgctc
aatgtcaccttgcaagggcccactcttaacgggacctttgcccagagcaaatgcccccaa
gtggagtggctgggctggctcaacaccatccagccccccttcctctgggtgctgttcgtg
ctggccaccctagagaacatctttgtcctcagcgtcttctgcctgcacaagagcagctgc
acggtggcagagatctacctggggaacctggccgcagcagacctgatcctggcctgcggg
ctgcccttctgggccatcaccatctccaacaacttcgactggctctttggggagacgctc
tgccgcgtggtgaatgccattatctccatgaacctgtacagcagcatctgtttcctgatg
ctggtgagcatcgaccgctacctggccctggtgaaaaccatgtccatgggccggatgcgc
ggcgtgcgctgggccaagctctacagcttggtgatctgggggtgtacgctgctcctgagc
tcacccatgctggtgttccggaccatgaaggagtacagcgatgagggccacaacgtcacc
gcttgtgtcatcagctacccatccctcatctgggaagtgttcaccaacatgctcctgaat
gtcgtgggcttcctgctgcccctgagtgtcatcaccttctgcacgatgcagatcatgcag
gtgctgcggaacaacgagatgcagaagttcaaggagatccagacagagaggagggccacg
gtgctagtcctggttgtgctgctgctattcatcatctgctggctgcccttccagatcagc
accttcctggatacgctgcatcgcctcggcatcctctccagctgccaggacgagcgcatc
atcgatgtaatcacacagatcgcctccttcatggcctacagcaacagctgcctcaaccca
ctggtgtacgtgatcgtgggcaagcgcttccgaaagaagtcttgggaggtgtaccaggga
gtgtgccagaaagggggctgcaggtcagaacccattcagatggagaactccatgggcaca
ctgcggacctccatctccgtggaacgccagattcacaaactgcaggactgggcagggagc
agacactttgatgatgatgatgatgatgatgatgatgatgatggtggtggtgttggcaca
agctggcgcaatgagaagaagtccaggtcactgtgcatggcatcatcctggccccctcta
gagctccaatcctccaaccagagccagctcttccctcaaaatgctacggcctgtgacaat
gctccagaagcctgggacctgctgcacagagtgctgccaacatttatcatctccatctgt
ttcttcggcctcctagggaacctttttgtcctgttggtcttcctcctgccccggcggcaa
ctgaacgtggcagaaatctacctggccaacctggcagcctctgatctggtgtttgtcttg
ggcttgcccttctgggcagagaatatctggaaccagtttaactggcctttcggagccctc
ctctgccgtgtcatcaacggggtcatcaaggccaatttgttcatcagcatcttcctggtg
gtggccatcagccaggaccgctaccgcgtgctggtgcaccctatggccagccggaggcag
cagcggcggaggcaggcccgggtcacctgcgtgctcatctgggttgtggggggcctcttg
agcatccccacattcctgctgcgatccatccaagccgtcccagatctgaacatcaccgcc
tgcatcctgctcctcccccatgaggcctggcactttgcaaggattgtggagttaaatatt
ctgggtttcctcctaccactggctgcgatcgtcttcttcaactaccacatcctggcctcc
ctgcgaacgcgggaggaggtcagcaggacaaggtgcgggggccgcaaggatagcaagacc
acagcgctgatcctcacgctcgtggttgccttcctggtctgctgggccccttaccacttc
tttgccttcctggaattcttattccaggtgcaagcagtccgaggctgcttttgggaggac
ttcattgacctgggcctgcaattggccaacttctttgccttcactaacagctccctgaat
ccagtaatttatgtctttgtgggccggctcttcaggaccaagctcaggcccctgcccaag
aagggcctcaccgcggggctgcagagtgcacagtgcagccggtcagaggtccaggtctct
gagtcacacatgccactgttccagtcctcactccaccaccgcatgggcctggccgaccac
cgaaactcggcatcccatctgtaa

>gi568815584f:96163683_96364741|GENSCAN_predicted_peptide_4|1252_aa
XVTSQKAEIRLRRLPEQPKFFTQVPAGSGAFSISQGMQFCPQMLRKPKFPDRCYDTPRIK
RAYARSALQTARQTATKKLPQKQYLNEAGAEELADNGHRSMLGLRPRRGLEPESLPRGRS
RRNPQPQSAQLPAVTMPWPFSESIKKRACRYLLQRYLGHFLQEKLSLEQLSLDLYQGTGS
LAQVPLDKWCLNEILESADAPLEVTEGFIQSISLSVPWGSLLQDNCALEVRGLEMVFRPR
PRPENSSKIGLANKDRKNRPMQQEDEYRIQMELNRYYLRKDSLSVGVSSEQSFYETETAR
TPSSREETGSHSPVCLQLHYKHSENRGPQGNQARLSSVPHKAELQIKLNPVCCELDISIV
DRLNSLLQPQKLATVEMMASHMYTSYNKHISLHKAFTEVFLDDSHSPANCRISVQVATPA
LNLSVRFPIPDLRSDQERGPWFKKSLQKEILYLAFTDLEFKTEFIGGSTPEQIKLELTFR
ELIGSFQEEKGDPSIKFFHVSSGVDGDTTSSDDFDWPRIVLKINPPAMHSILERIAAEEE
EENDGHYQEEEEGGAHSLKDVCDLRRPAPSPFSSRRVMFENEQMVMPGDPVEMTEFQDKA
ISNSHYVLELTLPNIYVTLPNKSFYEKLYNRIFNDLLLWEPTAPSPVETFENISYGIGLS
VASQLINTFNKDSFSAFKSAVHYDEESGSEEETLQYFSTVDPNYRSRRKKKLDSQNKNSQ
SFLSVLLNINHGLIAVFTDVKTEPRFELHCSSDVVHIRTCSDSCAALMNLIQYIASYGDL
QTPNKADMKPGAFQRRSKVDSSGRSSSRGPVLPEADQQMLRDLMSDAMEEIDMQQGTSSV
KPQANGVLDEKSQIQEPCCSDLFLFPDESGNVSQESGPTYASFSHHFISDAMTGVPTEND
DFCILFAPKAAMQEKEEEPVIKIMVDDAIVIRDNYFSLPVNKTDTSKAPLHFPIPVIRYV
VKEVKFQHEVYPPCKPDCDSSLSEHPVSRQVFIVQDLEIRDRLATSQMNKFLYLYCSKEM
PRKAHSNMLTVKALHVCPESGRSPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLSAEVE
LQMTPDPEENLDSRQKFPFDLIIMANMYQWIRLSSNSFLPFDKMIQAAAETAYDMVSPGT
LSIEPKKTKRFPHHRLAHQPVDLREGVAKAYSVVKEGITDTAQTIYETAAREHESRGVTG
AVGEVLRQIPPAVVKPLIVATEATSNVLGGMRNQIRPDVRQDESQKWRHGDD

>gi568815584f:96163683_96364741|GENSCAN_predicted_CDS_4|3759_bp
ngagttacctcccaaaaggcagaaatacgattgcgcagactgccagaacagcccaagttc
ttcacccaggttccggcggggtcaggagcctttagcatttctcaaggaatgcagttttgc
ccacagatgcttcgaaaacccaagtttcctgatcgttgctatgacacacccaggattaag
cgagcgtatgcgagaagcgctctgcaaaccgccaggcaaacggcaacgaagaagctgcct
cagaaacaatacctgaatgaggcgggggccgaagaacttgctgacaatgggcaccggtca
atgctcgggcttaggccccgccgcggcctggagccggagtcgctaccccgaggccggagc
cgtcgcaacccgcagccgcagtcagcccagctgccagcagtcactatgccttggccgttt
tcggagtccatcaagaagagggcctgccggtacctcctgcagaggtacctgggccacttt
ctgcaggagaagctgagcctggagcagctcagcctggacctgtaccaaggcaccgggtcc
ctcgcccaggtccccttggacaaatggtgtctcaatgagatcttggagtcagcagatgca
cccttagaagtcactgaaggattcattcagtcaatttccctgtcagttccatggggctct
ttactgcaggataattgtgcactggaagtgagaggattagaaatggtcttccggcctaga
cctcgcccagaaaattctagcaaaatagggttagctaataaagataggaaaaatcgaccc
atgcagcaggaagacgagtatcgaattcagatggaattaaaccggtattatttgagaaaa
gattccctctctgtgggtgtatcttcagagcaaagcttttatgagacagaaacagctcgt
acaccttctagccgtgaagaaactggttcccattcccctgtgtgtcttcagcttcattat
aagcattctgagaatagagggccccagggtaatcaagcaagacttagttcagttcctcac
aaggcagaattgcaaattaaattaaatccagtgtgttgtgagctggatatcagtattgtg
gacaggttaaattccttgcttcaaccacagaaacttgccacagtagagatgatggcatcc
cacatgtatacttcatataataaacatattagtctgcacaaggctttcactgaagtgttt
ctagatgattcacatagtcctgcaaattgtcggatatcagtacaagttgccacaccagca
ttaaacctttctgttcgcttcccaatacctgatcttcgatctgatcaagaaagaggacca
tggtttaagaagtcacttcagaaggagatcctttatttagccttcacagatctagaattt
aagactgaatttataggaggatcaaccccagaacaaattaaattggaacttacctttaga
gaactaattggatcgttccaggaagagaaaggagatccatctattaagtttttccatgtg
tctagtggagtagatggagatacaacatcgtcagatgactttgactggccacgaattgta
ctgaaaataaatccaccagccatgcattccattttggagagaattgcagctgaagaagaa
gaggagaatgatggtcactaccaggaggaagaggaaggaggtgctcattccttgaaagat
gtttgtgatctaagaagaccagccccatctcctttttcttctcgtagagtaatgtttgaa
aatgaacagatggtgatgccaggagaccctgtagaaatgacagaatttcaggataaagca
atcagcaattctcactatgtgctggaacttacgttaccaaatatttatgtaacactacct
aataagagcttttatgagaagctttataataggatctttaatgacttgctactgtgggaa
ccaacagctccttcaccagtggagacattcgagaatatttcctatggcattgggctttca
gtagccagtcagctcattaatactttcaacaaagatagttttagtgcatttaaatctgca
gttcactatgatgaggaaagtggatctgaggaggagactttgcagtatttttccactgtt
gatcccaactatcgttctcgcaggaaaaaaaaattagactctcagaacaagaactctcag
agttttctctcagttcttctgaatattaatcatggattaatagcagtgttcacagatgtg
aagactgagccccgctttgagttacactgttccagcgatgttgtccatatcagaacgtgc
tcagactcttgtgctgcgttaatgaatctcattcagtacattgcaagctatggtgacttg
cagacacctaacaaggcagatatgaagcctggagcctttcaaagaaggtctaaggtagat
tccagtggtcgatcatcctcacgtggtccagtacttcctgaagcagatcaacaaatgtta
cgagatctgatgagtgatgctatggaggagatcgacatgcaacaaggcacctcgtcagta
aaaccacaggctaatggtgttttggatgaaaaatctcaaattcaggagccatgttgttca
gacctcttcctgtttcctgacgagagtgggaatgtatcccaggagtccggccccacctat
gcctcattctctcaccatttcatcagtgatgcaatgacaggtgtgcccactgagaatgat
gacttttgcattctttttgcaccaaaagcagccatgcaggagaaggaagaagaaccagtt
ataaaaatcatggttgatgatgcaattgtgataagagacaattatttcagtctgcccgtt
aataagaccgatacgagcaaagcccccttacactttcccattcctgtgattcgctatgtg
gtgaaggaggtgaagtttcagcatgaagtctacccgccatgcaaacctgattgtgattcc
agcctctcagaacacccagtctcccggcaggtgttcattgttcaggatcttgagattcga
gatcgtttggcaacatcacaaatgaataaatttttatacctgtattgcagtaaagaaatg
cctcgaaaagctcactccaacatgttgacagtgaaagccttacacgtgtgtccagaatct
ggcaggtccccacaggagtgctgcttgagagtgtcgctgatgccgctccgcctcaatatt
gaccaggatgctttgttcttcctgaaggatttcttcacaagtctttctgcagaagtagag
cttcaaatgactccagatccagaagagaatttagattcacgtcagaagttcccattcgac
ttgattatcatggcaaacatgtatcaatggatcagactttcttctaattcatttcttcct
tttgacaaaatgatccaggcagctgcagagactgcttatgatatggtgtctcctggtacc
ctttctatcgagcccaagaagaccaaaaggtttcctcatcaccggttagcccaccagcca
gtagacctgagggaaggtgtggccaaggcctacagtgttgtgaaagagggaatcacagac
acggctcagaccatttatgaaactgcggctcgagaacacgagagcagaggggtgactggt
gccgtgggcgaggttctgcgccagattcctccggcagtggtgaaacctctgattgttgcc
acagaagcaacgtcaaacgtgctgggtggcatgagaaaccaaattaggccagatgtccgg
caagacgagtcacagaaatggcgccacggggatgactga