GENSCAN 1.0	Date run:  5-Nov-116	Time: 19:13:18

Sequence gi568815580f:24327916_24550844 : 222929 bp : 41.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    600    721  122  2  2   82  100    34 0.728   2.37
 1.02 Intr +   2421   2541  121  0  1   89   82    38 0.811   2.88
 1.03 Intr +   7406   7598  193  1  1   38  103   173 0.931  11.94
 1.04 Term +   9040   9128   89  2  2  109   44    65 0.907   1.04
 1.05 PlyA +   9420   9425    6                               1.05

 2.00 Prom +  25681  25720   40                              -3.65
 2.01 Init +  25858  25937   80  0  2   83   75    37 0.463   2.48
 2.02 Intr +  27691  27744   54  1  0   89  116    42 0.908   4.28
 2.03 Intr +  28928  29007   80  2  2   38   88    81 0.033   1.38
 2.04 Term +  29993  30198  206  0  2   35   39   220 0.035   8.35
 2.05 PlyA +  31764  31769    6                               1.05

 3.00 Prom +  39064  39103   40                              -3.95
 3.01 Init +  47974  48136  163  0  1   60   44   181 0.680   8.86
 3.02 Intr +  48579  48763  185  1  2   60   27   153 0.696   4.99
 3.03 Intr +  49045  49199  155  0  2   35   58   115 0.031   1.15
 3.04 Term +  70106  70289  184  2  1   52   39   216 0.928   9.13
 3.05 PlyA +  71017  71022    6                               1.05

 4.00 Prom +  82813  82852   40                              -5.65
 4.01 Init +  98842  98877   36  0  0   83   94    34 0.561   3.57
 4.02 Intr + 100004 100132  129  1  0   55   80   127 0.814   8.57
 4.03 Intr + 102424 102469   46  0  1   57   92     8 0.053  -4.84
 4.04 Intr + 112581 112703  123  1  0   66   75   136 0.984   9.74
 4.05 Intr + 115134 115237  104  1  2   69  103   102 0.994   8.77
 4.06 Intr + 117478 117551   74  0  2   68  109    30 0.968   0.39
 4.07 Intr + 120178 120268   91  1  1   48   92    98 0.558   5.28
 4.08 Intr + 121904 122038  135  1  0   18   95    88 0.781   2.34
 4.09 Intr + 135448 135608  161  0  2   97   77   -18 0.012  -4.14
 4.10 Intr + 136285 136423  139  1  1   76   44   127 0.865   6.65
 4.11 Intr + 138822 138891   70  2  1   61   69    54 0.557  -1.36
 4.12 Intr + 140873 141036  164  0  2   88   87    35 0.488   2.17
 4.13 Intr + 148832 149096  265  1  1   87   39   174 0.588   8.56
 4.14 Intr + 155065 155230  166  2  1   44   78   127 0.724   5.40
 4.15 Intr + 157370 157475  106  2  1   33   66    39 0.114  -4.50
 4.16 Term + 162735 163007  273  2  0   47   34   182 0.217   3.19
 4.17 PlyA + 163149 163154    6                              -0.45

 5.09 PlyA - 163575 163570    6                               1.05
 5.08 Term - 163976 163817  160  1  1  109   43   120 0.926   6.03
 5.07 Intr - 168017 167874  144  1  0   29   76   118 0.453   3.18
 5.06 Intr - 171032 170907  126  1  0   27   51   119 0.239   0.97
 5.05 Intr - 172141 172019  123  0  0   73   52    85 0.288   2.18
 5.04 Intr - 175334 175170  165  1  0   59   77    65 0.159   0.65
 5.03 Intr - 179431 179171  261  0  0   34   72   267 0.024  15.38
 5.02 Intr - 180940 180468  473  1  2   12   82   382 0.032  20.95
 5.01 Init - 181750 181604  147  1  0  105   84    31 0.768   4.55
 5.00 Prom - 182033 181994   40                              -6.05

 6.00 Prom + 188290 188329   40                              -7.85
 6.01 Init + 189818 189876   59  1  2   61   94    65 0.110   5.25
 6.02 Intr + 190750 190927  178  1  1   82  100   146 0.805  14.20
 6.03 Term + 192888 192992  105  2  0  107   43    90 0.970   3.83
 6.04 PlyA + 192999 193004    6                              -1.75

 7.05 PlyA - 193893 193888    6                               1.05
 7.04 Term - 194980 194448  533  2  2  -16   43   479 0.300  26.42
 7.03 Intr - 195333 195243   91  0  1   63   75    62 0.161   1.05
 7.02 Intr - 213365 213006  360  2  0   36   48   207 0.062   5.99
 7.01 Intr - 216465 216303  163  2  1   98   68   125 0.974  10.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  28928  29014   87  2  0   38  103    77 0.803   2.37
S.002 Term +  29961  30198  238  0  1   59   39   252 0.855  12.06
S.003 Intr -  43693  43572  122  1  2   71   61   117 0.812   5.67
S.004 Init -  44593  44543   51  1  0   36  109    52 0.839   3.31
S.005 Init +  69388  69431   44  0  2   49   58    85 0.835   1.56
S.006 Init -  90469  90356  114  1  0   76   91    96 0.961   8.96
S.007 Term - 180940 180464  477  1  0   12   43   383 0.810  20.05
S.008 Term - 213365 213000  366  2  0   36   49   213 0.844   5.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:24327916_24550844|GENSCAN_predicted_peptide_1|174_aa
GHRERLSGEAEFELALKARLGFTRRTRKTRALLAERIVCARIPFPKLLLIKILLDYNGIV
INYHYYQDKKAQDKKTIMVMKTKELRHQEVMEFNQGHTIRVEELGFELKQASSRVHALIT
TLPLKSYLQEKSNWQSDLCERMEYVGHLLITKGKDAFTVDHKVIRVNITNNETK

>gi568815580f:24327916_24550844|GENSCAN_predicted_CDS_1|525_bp
ggacacagggaaaggctctctggggaagcagagtttgagctagctcttaaagcaagacta
gggtttaccagacggacaagaaagacaagagcacttctggcagagagaatagtatgtgca
agaataccctttcccaaactcctgcttatcaaaatcttactagattataatggtattgtt
attaactaccattattatcaagacaaaaaggctcaagataaaaagacaataatggtaatg
aagacaaaggaactgaggcaccaagaggttatggaatttaaccaaggtcacacaatcaga
gtggaggagctgggatttgaactcaagcaggctagttccagagtccatgctcttatcact
acgcttcctctgaagtcatacttacaggaaaagagcaactggcaatccgatttgtgtgag
agaatggaatatgtcggtcatttattaattacaaagggaaaagatgcctttacagtggac
cacaaagtgatcagagttaacatcaccaataatgaaacaaagtga

>gi568815580f:24327916_24550844|GENSCAN_predicted_peptide_2|139_aa
MDEAGNHHTQQTIARTRNQTPHVLTHRTHPSTTQSAPSKDINSERWNVEDDTELPETQPN
SDPNYSHSATSGFGAAYSTPKDNALIRMLEGTKGCLNIGVLASKDQQARIVTILAEVIEL
DQQKKVGLYTLGMYVEEQV

>gi568815580f:24327916_24550844|GENSCAN_predicted_CDS_2|420_bp
atggatgaagctggaaaccatcatactcagcaaactatcgcaaggacgagaaaccaaaca
ccgcatgttctcactcacaggacccatccaagtacaactcaatctgcaccatcaaaagat
atcaacagtgaaagatggaatgtggaggatgacactgaacttccagaaactcaaccaaat
agtgaccccaattatagccactctgccacctcaggttttggggcagcttattccacacct
aaagataatgctctgattcgtatgctagaaggcaccaaaggctgcctgaacattggggtc
cttgcatccaaggaccagcaggcaagaatagtcaccatcttagcagaagtaattgaactt
gatcagcagaaaaaagtagggctgtacacattggggatgtacgtggaagaacaggtttag

>gi568815580f:24327916_24550844|GENSCAN_predicted_peptide_3|228_aa
MKPRTLAVSVTALKAARLELFVPPGGLVVSLASGVKLQTFAVSVTAHKSSVDPKNSGAQL
ASPSGSRTGAAGGAACQSCTMRPHSSALGWWMGLGAVEQGAVLIEEAWAAQEPMEGRLSF
HTSLQAEGAGSSLGQHRKGLPQCSDGLKGSSSAAKVGAQAEEARKRARFCQLLGTRKAFA
LLPPHPEGRSGRPYPETTRNRPCEPVEDSRPQAKYKSWVNSLKSVIKQ

>gi568815580f:24327916_24550844|GENSCAN_predicted_CDS_3|687_bp
atgaagccgcggaccctcgcggtgagtgttacagctcttaaggcggcgcgtctggagttg
tttgttcctcccggtgggctcgtggtctccctggcttcaggagtgaagctgcagaccttc
gcagtgagtgttacagctcataaaagcagtgtggacccaaagaactcaggagcccagctg
gcttcacccagtggatcccgcactggggctgcaggtggagctgcctgccagtcctgcacc
atgcgcccgcactcctcagcccttgggtggtggatgggactgggcgctgtggagcagggg
gcagtgctcatcgaggaggcttgggccgcacaggagcccatggaggggcgcctctccttc
cacacctccctgcaagccgagggagccggctccagccttggccagcacagaaaggggctc
ccacagtgcagcgatgggctgaagggctcctcaagtgccgccaaagtgggagcccaggca
gaggaggcccgaaagcgagcgaggttttgccagctactagggacgcgtaaagccttcgcg
ctcctcccaccacaccccgagggaagaagtggcaggccttacccggagactacaaggaac
cgcccgtgtgagccagtggaagactcgcgtccccaggcaaaatataagtcctgggttaat
agtctgaagtctgtcattaagcaatag

>gi568815580f:24327916_24550844|GENSCAN_predicted_peptide_4|693_aa
MAEGDAGSDQRQNEEIEAMAAIYGEEWCVIDDCAKIFCIRISDDIDDPKWTLCLQGKNVR
IYQIALRKYICPDVKKKTEEEDVECEDDLILACQPESSLKALDFDISETRTEVEVEELPP
IDHGIPITDRRSTFQAHLAPVVCPKQVKMVLSKLYENKKIASATHNIYAYRIYCEDKQTF
LQDCEDDGETAAGGRLLHLMEILNVKNVMVVVSRWYGGILLGPDRFKHINNCARNILVEK
NYTNSPLHPEVCIFNAGLTMTQSLGAFCNRIQVFWQCCSFSFAMLGNEPFVSAWKKAWTC
SGAGDIPDQDSGQYWFLMRAVFLACRRLPSTCVLKRPFSECAQRERTNLVLMKKWEFLEV
PDTFEVTQQSVISIPLYIPHTLFEWDFGKEICVFWLTTDYLLCTASVYNIVLISYDRYLS
VSNAVSYRTQHTGVLKIVTLMVAVWVLAFLVNGPMILVSESWKDEGSECEPGFFSEWYIL
AITSFLEFVIPVILVAYFNMNIYWSLWKRDHLRLGHPKGWGQLVLRLPHGVEGQPWRLQL
VPRMGYIEVGGLLCTAAGEMSTHARSAKLLSTGSENDTLPVPSLASRSLCPSVLSLGSFP
SCQSCLSDQMSQCDTEPERKSFLSMMQGTQHFDNPDGMWSSHGRNVSSGGLHNHCILQMG
TGSAEASHPEGPRGGQGQVTTRATTQKRVAASG

>gi568815580f:24327916_24550844|GENSCAN_predicted_CDS_4|2082_bp
atggctgagggggacgcagggagcgaccagaggcagaatgaggaaattgaagcaatggca
gccatttatggcgaggagtggtgtgtcattgatgactgtgccaaaatattttgtattaga
attagcgacgatatagatgaccccaaatggacactttgcttgcagggcaagaacgtgcgg
atttatcaaatagccttgaggaaatatatatgcccagatgtaaagaagaaaactgaagag
gaagatgttgaatgtgaagatgatctcattttagcatgtcagccggaaagttcgcttaaa
gcattggattttgatatcagtgaaactcggacagaagtagaagtagaagaattacctccg
attgatcatggcattcctattacagaccgaagaagtacttttcaggcacacttggctcca
gtggtttgtcccaaacaggtgaaaatggttctttccaaattgtatgagaataagaaaata
gctagtgccacccacaacatctatgcctacagaatatattgtgaggataaacagaccttc
ttacaggattgtgaggatgatggggaaacagcagctggtgggcgtcttcttcatctcatg
gagattttgaatgtgaagaatgtcatggtggtagtatcacgctggtatggagggattctg
ctaggaccagatcgctttaaacatatcaacaactgtgccagaaacatactagtggaaaag
aactacacaaattcacctcttcatccagaggtctgcatatttaatgcagggctcaccatg
acacagtccctgggagctttttgtaacaggattcaagttttctggcagtgctgttctttc
tcctttgccatgctgggaaatgaaccttttgtctcagcctggaagaaggcgtggacgtgt
tctggagctggggacatcccagatcaagattctggccaatattggttcctgatgagggct
gtctttctggcttgcagacggctgccgtctacctgcgtcctcaagaggcctttctctgag
tgcgcacagagagagagaactaatttggttctcatgaaaaaatgggaattcctggaagta
cctgatacatttgaagtaactcaacaaagtgtgatctccattcctttgtacatccctcac
acgctgttcgaatgggattttggaaaggaaatctgtgtattttggctcactactgactat
ctgttatgtacagcatctgtatataacattgtcctcatcagctatgatcgatacctgtca
gtctcaaatgctgtgtcttatagaactcaacatactggggtcttgaagattgttactctg
atggtggccgtttgggtgctggccttcttagtgaatgggccaatgattctagtttcagag
tcttggaaggatgaaggtagtgaatgtgaacctggatttttttcggaatggtacatcctt
gccatcacatcattcttggaattcgtgatcccagtcatcttagtcgcttatttcaacatg
aatatttattggagcctgtggaagcgtgatcatctcaggcttgggcatcccaagggatgg
ggccagctggtgctcagactgccacatggggttgagggacagccgtggcggctgcagctg
gtccctcggatggggtacattgaagtaggaggcttgttgtgcactgctgctggagagatg
tcaactcacgctagaagtgctaaactgctgtcaacaggcagtgaaaatgacaccttgcca
gttccaagcctagcctcaagaagcctgtgcccatctgttctatctcttggcagttttccc
agctgccagagctgccttagtgaccagatgtcacaatgtgatacagagccagagaggaag
tcatttttgtccatgatgcaaggaacccagcattttgacaacccagatggaatgtggagc
tcccatggaagaaacgtgtcatctggaggcctgcataaccactgcattctccagatgggc
actggaagcgctgaggcttcccacccagaaggtccacgtggtggacaagggcaagtgaca
accagagccacgactcaaaagagggtggctgcttcaggctga

>gi568815580f:24327916_24550844|GENSCAN_predicted_peptide_5|532_aa
MGSKVVPGAGTSVCKCLGVKQLEVFLDYNLLSVLWNRSVVRQDSGRNCRTCYSQLSTVEH
TLHRNCTCVDHEGEALISVQIFISPRRGTVERDLSEKNKGRAILLKSHRVHTQEMPFPCS
KVGKGYLVSSGLFQHQAIHNEKPCRSAMYGDMFHTQQGHFKCIDYGEAFSPKDTPGQHQI
IHTGEKPYVCTECEKTCTRSSNLIQHKDFTLEQALMCTAGVGNPTAEMSTLQGTRKFTTQ
KGFMSGDNVREPLAVPLTLLSTRKFTLQKPYECIECGKVSAKECLVQHQKLTLNDIVGTL
DGHSWNSKCTFQKNQSPTVPNTPSLRGAGWNDPSDSTQIHIAVFQASKSFFFKRLPCSIQ
KCFPITSFPSGRSARFPLTQNKLLLGPHFWCPHSLAARPWWTRSMSHPEPLGEGSYLRSS
LTHGFLTYEPGRAWQRWPPLLHEASFEVAQRGLEDPLSRMVPSHGCQVGASYQLGSESEI
HVIYPRNPGSNWNIEARVGSMPSPFPLDVLIIHVIPACFLPWVIRVITDAVS

>gi568815580f:24327916_24550844|GENSCAN_predicted_CDS_5|1599_bp
atggggtcaaaggttgtccctggagcaggaaccagtgtctgcaaatgcttgggggtgaaa
cagttggaagtgttcctagactacaatctcctttctgtcttgtggaacaggagtgtagtg
aggcaggactcaggccggaactgcaggacatgctacagccagctgagcaccgtggaacac
accctacacagaaactgtacatgtgtggaccatgagggagaagctttaatttcagtgcaa
atcttcatcagccccagaaggggcacagtggagagagacctttctgaaaaaaacaagggc
agggccatcttgttgaagagccacagagttcacactcaagagatgccatttccatgcagc
aaggttggaaaaggctacctggtcagctctggcctcttccagcaccaagcaattcacaat
gagaagccatgcaggagtgccatgtatggggacatgtttcatactcaacaaggacatttc
aaatgcattgactatggagaagcattcagtcctaaagacactcctggccagcaccagata
attcacactggagaaaagccttatgtgtgcactgaatgtgagaaaacctgcacaagaagt
tccaatctcattcagcacaaagacttcactctggagcaagcccttatgtgtacagcaggt
gtgggaaatcctacagcagaaatgtccaccttgcagggcaccagaaagttcacaacacag
aaaggttttatgagtggggacaatgtgagagagcctttggctgtccctctaaccttgctc
agcaccagaaagttcaccctgcaaaagccttatgaatgcatagaatgtgggaaggtttca
gccaaggagtgccttgttcagcaccaaaagttgacactgaatgacattgtgggcactctg
gatggccactcctggaactccaaatgcacatttcaaaaaaatcaatcacccaccgttcca
aacacaccctcactcagaggagcaggatggaatgacccatctgattcaactcagattcat
attgctgttttccaggccagcaaaagttttttcttcaaacgactgccgtgcagtatccaa
aaatgctttccaattacatcattcccttctggaaggtctgcacgatttccactgactcag
aataagctcctacttgggcctcacttctggtgtccccactccctggcagcaaggccttgg
tggactcgatcgatgtcccacccagagccccttggcgagggctcttacctgcggtcttct
ctaactcatggcttcttgacctatgagcctgggagggcttggcagagatggccacctctg
ctccatgaagcatcatttgaggtggcccaacgaggactagaggatccactttcaagaatg
gttccctcacatggctgccaagttggtgccagctatcagctgggatccgaatcagagatc
catgttatttatccacgcaatcccggaagtaattggaatatagaagctcgagtgggttct
atgccctctccatttcctctggacgtactaattatccatgttatacccgcttgcttctta
ccatgggtaataagggttatcactgacgctgttagttaa

>gi568815580f:24327916_24550844|GENSCAN_predicted_peptide_6|113_aa
MQGLQPDQECRLEGNAAAPRCGDGLLLFHAAIATGTQHLFLKSVMQDFHSTACEQPHTQR
PPAHTVLGPPPAQCTPAATERQPSWGISTKSVKSPRLPAGVGFKGLKDIPVAE

>gi568815580f:24327916_24550844|GENSCAN_predicted_CDS_6|342_bp
atgcagggcctgcagccagaccaggaatgtcgcctggagggcaatgcggcagcacccagg
tgtggggatgggctgctgctgttccacgctgccatcgccaccgggacccaacatctcttc
ctgaagtccgtgatgcaggattttcactccaccgcttgcgaacagccccacacccagcgc
cctcccgcacacaccgtcttggggcctcctccagcgcagtgcactcctgctgccacggaa
agacagccttcctggggcatcagcacaaagtctgtaaagtccccaaggcttcctgctggt
gtgggcttcaaaggcttgaaggatatcccagtggcagagtaa

>gi568815580f:24327916_24550844|GENSCAN_predicted_peptide_7|382_aa
XSSGVTIMQIGQSKSAKNAETDLQMLPNSSVQQPSTVLIWSNGDIQWSIKLHLDEKKEGK
TTEAASNYQSHPNVGQPMPFTDKIMKDWIENWPSKCRVKCKRESGVRQIFEGHQILDNAR
NKAYHVTMTRTMTRPWDGPGVSRVSRGETLEPKRPAEESDDLSSPREHSGPGVTENDLPD
ACAHNAKDFSERKSKKLKLDSWWLEDLRHVQVLASSHTSSSHQCYTASRNPRDDQQVHDG
PNPHLGELTLEGIKQPFVAVEREEWKFDIPCDLYEMLTVIQVVIFCNTKRKVDWLMEKMR
DAALTVSSMHRDTPQKGPQSVSKEFPSGTSTGLISTDVWAGRSDVPQVSVIINYDLPKKQ
NCTHTEFGDQVDMAGRLWPLTL

>gi568815580f:24327916_24550844|GENSCAN_predicted_CDS_7|1149_bp
nnaagctctggggtgactataatgcaaattggacaaagcaagagtgctaaaaatgcagag
acagaccttcaaatgctcccaaattctagcgtccagcagccgtccacagtacttatatgg
agcaatggtgacatccagtggtcaattaagttacacctggatgagaaaaaagaggggaaa
acaacagaagctgcttccaattatcaatcacatccaaatgtgggccaacccatgccattt
accgacaaaataatgaaggattggatagagaactggccttcgaagtgcagagtgaaatgc
aagagagaatccggtgtcaggcagatctttgaaggtcaccagattcttgataatgccaga
aacaaggcctaccacgtgaccatgacgagaacgatgaccaggccctgggacggccctggt
gtgagcagagtaagcagaggtgaaaccttggagcccaaaaggccggcagaagaaagtgat
gatttaagctcaccaagagagcattcaggtcctggggtaactgagaatgatctgccagat
gcatgtgctcataatgcaaaggatttctctgaaaggaaaagcaagaaactgaagctggac
tcttggtggctggaagatttgcgacatgttcaggtacttgcctccagtcacacaagtagt
tctcatcagtgttacactgcctcgcgaaatcctagagatgaccaacaagtacatgatgga
cccaatccacatcttggtgaattgactctggaaggcatcaaacagccttttgtggcagtg
gaaagagaagagtggaaattcgacatcccatgtgatctctacgaaatgctaactgttatt
caggtggtcatcttctgtaacaccaaaaggaaagttgactggctgatggagaaaatgaga
gatgctgctctcaccgtgtcctcgatgcacagagacacacctcagaaagggccacagtcc
gtcagtaaggagttcccatccggcaccagcacagggctcatttccacagatgtctgggcc
gggaggtcagatgtccctcaggtgtccgtcatcattaactatgacctgcccaaaaaacag
aattgtactcacacagaatttggagatcaggtcgatatggctggaaggctgtggccatta
actttgtaa