GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:01:05

Sequence gi568815597f:116654493_116868780 : 214288 bp : 43.89% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    608    603    6                               1.05
 1.02 Term -   9780   9686   95  1  2   85   48    48 0.367  -1.51
 1.01 Init -  11834  11792   43  2  1  107  106   103 0.721  12.58
 1.00 Prom -  35446  35407   40                              -4.76

 2.05 PlyA -  36606  36601    6                               1.05
 2.04 Term -  40866  40787   80  1  2   84   48   103 0.191   3.83
 2.03 Intr -  51999  51947   53  2  2  103   97    73 0.923   8.25
 2.02 Intr -  59485  59345  141  0  0   42   46   215 0.569  12.17
 2.01 Init -  60343  60066  278  1  2   91   71   334 0.583  28.46
 2.00 Prom -  61106  61067   40                              -8.86

 3.00 Prom +  61704  61743   40                              -7.26
 3.01 Init +  63453  64579 1127  2  2   60   53   411 0.682  28.47
 3.02 Term +  70453  70471   19  1  1   99   47    12 0.075  -4.01
 3.03 PlyA +  70794  70799    6                               1.05

 4.09 PlyA -  73237  73232    6                               1.05
 4.08 Term -  73879  73727  153  1  0   84   32   101 0.389   2.02
 4.07 Intr -  84811  84734   78  1  0   74  105    54 0.664   5.45
 4.06 Intr -  86381  85398  984  2  0  -19   55  1171 0.536  94.19
 4.05 Intr -  86807  86503  305  0  2  -63   57   443 0.857  22.41
 4.04 Intr -  87182  87011  172  2  1    0   52   239 0.958  11.02
 4.03 Intr -  87638  87372  267  2  0    5   61   272 0.777  13.93
 4.02 Intr -  88132  87959  174  1  0   81    3   218 0.368  12.74
 4.01 Init -  96906  96829   78  0  0   93   38    22 0.082  -1.24
 4.00 Prom -  98218  98179   40                              -5.76

 5.00 Prom +  98287  98326   40                              -5.86
 5.01 Init + 100001 100061   61  1  1   63  121   -10 0.903   1.21
 5.02 Intr + 100139 100459  321  0  0  120  115   183 0.987  20.03
 5.03 Intr + 105910 106140  231  2  0   92   96   132 0.966  12.14
 5.04 Intr + 109992 110114  123  1  0  126  103    64 0.994  12.26
 5.05 Term + 110145 110191   47  1  2  126   41    38 0.879   0.27
 5.06 PlyA + 110463 110468    6                               1.05

 6.02 PlyA - 116177 116172    6                               1.05
 6.01 Sngl - 121140 120928  213  0  0   44   33   218 0.394   7.02
 6.00 Prom - 122192 122153   40                              -2.46

 7.00 Prom + 131053 131092   40                              -2.36
 7.01 Init + 135280 135605  326  0  2   71   50   119 0.117   3.20
 7.02 Term + 150365 150461   97  2  1   97   53    98 0.879   4.64
 7.03 PlyA + 150619 150624    6                               1.05

 8.08 PlyA - 152703 152698    6                               1.05
 8.07 Term - 159241 159161   81  1  0  101   54    94 0.512   4.99
 8.06 Intr - 171988 171905   84  1  0  114   45    23 0.012   0.62
 8.05 Intr - 193142 193116   27  2  0  127   65    10 0.218   0.91
 8.04 Intr - 199410 199334   77  1  2   86  101    34 0.538   3.73
 8.03 Intr - 200684 200467  218  1  2   63   94    73 0.478   3.55
 8.02 Intr - 206853 206769   85  1  1  100   52    60 0.422   2.48
 8.01 Init - 210999 210960   40  0  1   80  115    42 0.620   6.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  51634  51576   59  2  2  106   44    16 0.816  -3.15


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_1|45_aa
MKCFFPVLSCLAVLGAMEENEHQGGFKGAQWQTSRCRLKWEGLEL

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_1|138_bp
atgaagtgctttttcccggtgctgagctgtctggctgtgctgggtgccatggaggaaaat
gagcatcaaggtggctttaaaggggcacagtggcagacatccagatgcaggctgaagtgg
gaaggtttggaactgtag

>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_2|183_aa
MVKVKPGVNGLGCIGCVVTRAAFNSGKVDIVAINDAFNDLNYMVYMFQYDFTHGEFHGTV
KAENRKLVINRDPITIFQELDSTRIKWGDAGTGDTHSSTFDTGAGIALNDHFVKLISCYD
NEFGYSNRVVDFMAHMASKENLSSTGLNEKATVTEEIDVYLDSGAPGKNPPVFTMAVPGA
CRT

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_2|552_bp
atggtgaaggtgaagcctggagtcaatggattaggctgtattgggtgcgtggtcaccagg
gctgcttttaactctggtaaagtggatattgtcgccatcaatgatgccttcaatgacctc
aactacatggtctacatgttccagtatgatttcacccatggcgaattccatggcactgtc
aaagctgagaacaggaagcttgtcatcaatagagatcccatcaccatcttccaggagcta
gattccaccagaatcaaatggggtgatgctggcactggtgacacccactcctccaccttt
gatactggggctggcattgccctcaatgaccactttgtcaagcttatttcctgttatgac
aatgaatttggctacagcaacagggtggtggacttcatggcccacatggcctccaaggag
aacctgagctccacaggactcaatgaaaaagcaactgtaacagaagagatagatgtctac
ctggattctggagctccaggaaagaacccccctgtgttcacaatggcggtccctggtgcc
tgcagaacttag

>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_3|381_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGKD
FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYSSDKGLISRI
YNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYH
LTPVRMAIIKKSGNNRGRLSL

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_3|1146_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagatcaatggaacagaacagagccctcagaaataatgccgcatatctacaac
tatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaac
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaatcaattcaagatggattaaagatttaaacgttagacctaaaacc
ataaaaaccctagaagaaaacctaggcattaccattcaggacataggcgtgggcaaggac
ttcatgtccaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acaacatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatc
tacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcg
aaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaag
aaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccactatgagatatcat
ctcacaccagttagaatggcaatcattaaaaagtcaggaaacaacagggggcgtctaagt
ctgtga

>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_4|736_aa
MELPVCEWLTHQLPSNSSVSRPGGEKAPAQTMMSFGGSEALLGAERQQQPPLHADPKGQH
KQKALGCWILQRVPLMDTDVHELHSAAPGAGAPAPGLPHVHRCLHDEAQQHKEVKACAVG
GFLQEAEAAGVELQKKAQALQEECSYLWHRQQEQVGELLGQMQGCGASQAQAQEEITEYQ
RQLPAETTELEALKSTIDSLDRQCSELEDRHQADIASYQEATQQLDAGTPKKIKVVEKSE
KETVIVEEQTEETQVTEKVTEEEEKEAKEEEVKEEEGGEEEEAKGGEEEAKSPLAEEATS
PEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEAKSPAKEEAKSLAEAKSPKKAKSPVKEE
AKSPEKAKTLDVKSPEANTPAKEEARPSADKSPKKAKSPVKEEVKFPEKVKSPLKEDAKA
PEKEIPKKEEVKSPVKEEEKPQDVKVKEPAKKAEEEKATATPKTEKESKKEESSNKEAPK
PEVEEKEAAIEKPKESKVEAKKEEAEDKKKAATLEKEAPAKVEVKEDAKPKEKTEMAKKE
PDDAKAKEPRKPAEREEAAAAMEKKDTKEEKATEFKKPEEKPKTQSQRRPSQRSSVNLRR
KRLKNPPAQTKKTAGLQRRPQKTRLPRGSKAGRKECLEQPKKLKRVLELKDQSNAIFTFY
MITAEFQYQYQQQNQIPQTLSLPGKETCPRAIGGTSAATITLIDPETDTLIINRPCHVQL
PQWRDVALSDNVALVF

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_4|2211_bp
atggagcttcctgtttgtgagtggctgacccaccagctgccatccaactccagtgtgtca
aggcctggtggagagaaggcacctgctcagaccatgatgagctttggtggctctgaggca
ctgctgggtgctgaacggcagcagcagcctccactacacgctgaccctaaagggcagcac
aagcagaaggcgctcggctgctggatcctccagcgggttccactcatggacacggatgtc
catgagctccattctgctgcgcctggagcaggagcacctgctccaggacttccacatgtg
caccggtgcctccatgatgaggcccagcagcacaaagaggtcaaggcttgtgctgttggc
ggcttcttgcaggaggccgaggcggcgggcgtggaactgcagaagaaggcgcaggcactg
caagaggagtgtagctacctgtggcaccgccagcaggagcaggtgggcgagctgctcggc
cagatgcagggctgcggcgcctcgcaggcgcaggcgcaggaggagataactgagtatcag
cgtcagcttccggccgagaccacagagctggaggcactgaagagcaccatcgactcactg
gacaggcagtgttctgagctggaggaccgtcatcaggccgacattgcctcctaccaggaa
gccactcagcagctggacgctggaacaccaaagaagatcaaagtggtagagaagtctgag
aaagaaactgtgattgtggaggaacagacagaggagacccaagtgactgaaaaagtgact
gaagaagaggagaaagaggccaaagaggaggaggtcaaggaggaagaagggggtgaagaa
gaggaggcaaaagggggagaagaagaagcaaagtctcccctagcagaagaggccacatcc
ccagagaaggaagccaagtccccagtgaaggaagaggcaaagtcaccggctgaggccaag
tccccagagaaggaggaagcaaaatccccagctgaggccaagtccccagcaaaggaagag
gcaaagtcactggctgaggccaagtctccaaagaaggccaagtccccagtgaaggaagaa
gcaaagtcccctgagaaggccaagactcttgatgtgaagtctccagaagccaacactcca
gcaaaggaggaagcaaggccctctgcagataaatcccccaaaaaggccaaaagccctgtc
aaagaggaggtcaagttcccagagaaggtgaagtctcccctgaaagaggatgccaaggcc
cccgagaaggagatcccaaagaaggaagaggtgaagtccccagtgaaggaggaggagaag
ccccaggacgtaaaagtcaaagagcctgcaaagaaggcagaggaagagaaagctaccgcc
acgccaaaaacagagaaggagagcaagaaagaggagtcatccaacaaggaggctccaaag
cccgaggtggaggagaaggaagctgccatcgaaaagcccaaagaatccaaagttgaagcc
aagaaggaagaggctgaagataagaaaaaagcagccaccttagagaaggaggctcctgcc
aaggtggaggtgaaggaagacgctaaacccaaagagaagacagagatggccaagaaggaa
ccagatgatgccaaggccaaggaacccagaaaaccagcagagagggaggaggcggcagca
gcaatggagaaaaaagataccaaggaggagaaggccactgagttcaagaagcctgaggag
aaacccaagacccaaagccaaagacgaccctctcaaaggagctcagtgaacctaaggcgg
aaaaggctgaaaaatcctccagcacagaccaaaaagacagcaggcctccagagaaggcca
cagaagacaaggctgccaaggggaagtaaggcagggagaaaggaatgtctggagcagcca
aagaaactcaaaagggtcctggagctcaaggatcagagtaatgcaatttttactttttat
atgatcacagcagaatttcagtatcagtatcagcagcaaaatcagattccacaaacattg
tcactgccaggcaaagagacctgcccaagggccattggaggtaccagtgctgccaccatc
accctgattgacccagaaactgatactttgataatcaacaggccatgtcatgtccagctc
ccccaatggagggacgtggcactgtcagacaatgtggccttggtgttttaa

>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_5|260_aa
MSFPCKFVASFLLIFNVSSKGAVSKEITNALETWGALGQDINLDIPSFQMSDDIDDIKWE
KTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEK
IFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITHKWTTSL
SAKFKCTAGNKVSKESSVEPVSCPEKGLDIYLIIGICGGGSLLMVFVALLVFYITKRKKQ
RSRRNGPSKIPMKQLMGMTP

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_5|783_bp
atgagctttccatgtaaatttgtagccagcttccttctgattttcaatgtttcttccaaa
ggtgcagtctccaaagagattacgaatgccttggaaacctggggtgccttgggtcaggac
atcaacttggacattcctagttttcaaatgagtgatgatattgacgatataaaatgggaa
aaaacttcagacaagaaaaagattgcacaattcagaaaagagaaagagactttcaaggaa
aaagatacatataagctatttaaaaatggaactctgaaaattaagcatctgaagaccgat
gatcaggatatctacaaggtatcaatatatgatacaaaaggaaaaaatgtgttggaaaaa
atatttgatttgaagattcaagagagggtctcaaaaccaaagatctcctggacttgtatc
aacacaaccctgacctgtgaggtaatgaatggaactgaccccgaattaaacctgtatcaa
gatgggaaacatctaaaactttctcagagggtcatcacacacaagtggaccaccagcctg
agtgcaaaattcaagtgcacagcagggaacaaagtcagcaaggaatccagtgtcgagcct
gtcagctgtccagagaaaggtctggacatctatctcatcattggcatatgtggaggaggc
agcctcttgatggtctttgtggcactgctcgttttctatatcaccaaaaggaaaaaacag
aggagtcggagaaatggccccagcaaaatccccatgaaacagctcatggggatgacacct
tga

>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_6|70_aa
MFFADSHRGFLLHLCLEGTGAFPVPQRLAAQSQSFHLLTVRWDRPEAPGQPGAPASSIYL
STSDAFTAIT

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_6|213_bp
atgttcttcgccgacagtcaccgcggtttcctgcttcacctgtgcttggagggaactggc
gcttttcccgtgccccagcggctggcggctcagagccagagcttccacctcctcaccgtg
cgctgggaccgccctgaggcccccggtcaacctggcgctccagcctcctccatctacctg
tccacatctgatgctttcaccgccataacgtag

>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_7|140_aa
MAILPKAIYKFNAIPIKIPPSFFAELEKKILKFMTQKRLIAKARLSKKNKSGGITLPDFK
LYYETIVTKTAWHWYKNRHIDQWNRIENSEIKPNTYSQLIFNKGNKNIKMCPENLKQRGT
QRKVYALQPTPKEEEDRRLS

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_7|423_bp
atggccatactgccaaaagcaatctacaaattcaatgcaattcccatcaagataccacca
tcattctttgcagaactagaaaaaaaaatcctaaaattcatgacccaaaaaagactcata
gccaaagcaagactaagcaaaaagaacaaatctggaggcattacattacccgacttcaaa
ctatactatgagaccatagtcaccaaaacagcatggcactggtataaaaacagacatata
gaccaatggaacagaatagagaactcagaaataaagccaaatacttacagtcaactgatc
ttcaacaaaggaaacaaaaacataaagatgtgccctgaaaaccttaagcaaagaggaaca
cagagaaaagtgtacgccctgcagccaactcccaaagaggaagaggaccgcagacttagc
tga

>gi568815597f:116654493_116868780|GENSCAN_predicted_peptide_8|203_aa
MGAVLEALWQYSPGGTGLPGKQVLHLHADLRVKEGKVSTLNKVDFWCQKPRTLTGTASVP
ARFRKPSPVLKREKRLKKTEVEYRKEIKKQKKGAALWKRGEKEGVWGKKVEELAALELRL
ELLSRKQVLLLVNYHDCVYMCQFNRFISLAHIGGPEDARTWVFEDQGLRGPGCARAWNIR
FQNYISQAEGFLYGETKRKDLTL

>gi568815597f:116654493_116868780|GENSCAN_predicted_CDS_8|612_bp
atgggggctgtccttgaagccttgtggcagtacagcccagggggcactgggcttccaggc
aaacaggtcctccacttacatgcagatctgcgtgtgaaagaagggaaggtttcgaccctg
aacaaagtcgatttctggtgtcagaaaccaagaactctgactggtacagcatctgtccct
gcaagattcaggaaaccaagtccagtgctcaagagggagaagagattaaagaaaacagaa
gtagaatatagaaaggaaataaaaaagcagaaaaagggtgcagcattgtggaagcgtggg
gagaaggaaggagtgtgggggaagaaagtagaggaattggcagctctggagctcagactg
gaactgctcagcaggaaacaggtcttgctgctagtaaattaccatgactgtgtttacatg
tgccaatttaatcggtttataagcctggcccacataggaggaccagaagatgcaaggacc
tgggtgttcgaggaccagggtctgagaggaccagggtgtgcaagggcctggaacattcgc
ttccagaattatatctcccaggcagaaggattcctctatggagaaaccaagagaaaagac
ctgacactttga