GENSCAN 1.0 Date run: 5-Nov-116 Time: 08:05:17 Sequence gi568815575f:123785663_124007178 : 221516 bp : 43.44% C+G : Isochore 2 (43 - 51 C+G%) Parameter matrix: HumanIso.smat Predicted genes/exons: Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ 1.01 Init + 46122 46170 49 2 1 86 89 45 0.548 3.51 1.02 Intr + 71554 71611 58 2 1 81 89 40 0.695 1.34 1.03 Intr + 73967 74076 110 2 2 94 48 83 0.585 4.83 1.04 Intr + 99969 100337 369 1 0 69 61 180 0.094 8.48 1.05 Intr + 114831 115031 201 1 0 88 91 85 0.815 8.06 1.06 Term + 121326 121519 194 1 2 96 33 49 0.412 -2.22 1.07 PlyA + 121951 121956 6 1.05 2.00 Prom + 124213 124252 40 -2.36 2.01 Init + 147099 147194 96 2 0 85 56 113 0.138 8.11 2.02 Intr + 176064 176194 131 2 2 136 69 78 0.039 10.19 2.03 Intr + 182022 182133 112 0 1 18 103 42 0.014 -0.92 2.04 Intr + 192976 193115 140 0 2 67 119 35 0.370 3.76 Suboptimal exons with probability > 0.800 Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr.. ----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------ S.001 Term - 173743 173585 159 1 0 63 36 118 0.814 2.04 Predicted peptide sequence(s): Predicted coding sequence(s): >gi568815575f:123785663_124007178|GENSCAN_predicted_peptide_1|326_aa MGFRHVGQAGLKLLTSATNPKTEQGRYHNAFYDLVLAQQVKTVGKTILKAERRNTGAGGG DYEVLTAHVRALEKVDKSYFQEKMTFNSFEGSKTCVPADINKEEEFVEEFNRLKTFANFP SGSPVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGFY LENSATQSTNSGIQNDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLV ADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC KQCAEAVDKCPMCYTVITFKQKIFMS >gi568815575f:123785663_124007178|GENSCAN_predicted_CDS_1|981_bp atggggtttcgccatgttggccaggctggtctcaaactcctgacctcagcaaccaatcca aaaacggagcaaggcagataccacaatgccttttatgacctagtcttggcccaacaggta aaaaccgtgggaaaaaccatccttaaggctgaaagaagaaacactggagctgggggcgga gactacgaggtgctcactgcgcatgtgcgcgcgctagaaaaggtggacaagtcctatttt caagagaagatgacttttaacagttttgaaggatctaaaacttgtgtacctgcagacatc aataaggaagaagaatttgtagaagagtttaatagattaaaaacttttgctaattttcca agtggtagtcctgtttcagcatcaacactggcacgagcagggtttctttatactggtgaa ggagataccgtgcggtgctttagttgtcatgcagctgtagatagatggcaatatggagac tcagcagttggaagacacaggaaagtatccccaaattgcagatttatcaacggcttttat cttgaaaatagtgccacgcagtctacaaattctggtatccagaatgatgataccatcttc caaaatcctatggtacaagaagctatacgaatggggttcagtttcaaggacattaagaaa ataatggaggaaaaaattcagatatctgggagcaactataaatcacttgaggttctggtt gcagatctagtgaatgctcagaaagacagtatgcaagatgagtcaagtcagacttcatta cagaaagagattagtactgaagagcagctaaggcgcctgcaagaggagaagctttgcaaa atctgtatggatagaaatattgctatcgtttttgttccttgtggacatctagtcacttgt aaacaatgtgctgaagcagttgacaagtgtcccatgtgctacacagtcattactttcaag caaaaaatttttatgtcttaa >gi568815575f:123785663_124007178|GENSCAN_predicted_peptide_2|160_aa MGVELPKAMGAHFLHRHDLDVRHGVKGDHYGTRGNNIHVTGPSASPPPHHLQRVVGELLG KAIGIDLSIPSEARLRWNSLLYIYAIWYDLLLLGYNPVQHVAVLNIVGSYNTVVIYRDYI VIQVEHPKSKIFQNLKPFKHPRDAPKKCSLEHFGYGMLNX >gi568815575f:123785663_124007178|GENSCAN_predicted_CDS_2|480_bp atgggggtggagctgcccaaggccatgggagcccacttcttgcatcggcatgacctggat gtgagacatggagtcaaaggagatcattatggaactagagggaacaacattcatgtgacg ggcccctctgcttctcccccgccccatcatctccagcgcgtggtgggggaactgctgggg aaggcgattggcatcgatctctccatcccttccgaggcccgacttcgatggaatagccta ctatacatctatgccatatggtatgacctgttgctcctaggctacaatcctgtacagcat gttgctgtactgaatatcgtaggcagttataatacagtggttatttatagagactatata gtaatacaggttgagcatcccaaatccaaaatcttccaaaatctgaaaccttttaagcac ccacgtgatgctccaaagaaatgttcattggaacattttggatatgggatgctcaactgn