GENSCAN 1.0	Date run:  5-Nov-116	Time: 08:05:55

Sequence gi568815584r:56701738_56905456 : 203719 bp : 41.98% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1035   1244  210  2  0   97   84   114 0.916  10.09
 1.02 Intr +   6411   6571  161  2  2  119   -6   146 0.022   6.16
 1.03 Intr +  13811  13918  108  2  0   62   91    53 0.076   1.48
 1.04 Intr +  16566  16687  122  0  2   -2   40   176 0.079   3.02
 1.05 Intr +  18373  18618  246  2  0   71   81   118 0.060   5.91
 1.06 Intr +  31749  31849  101  1  2  107   42   111 0.011   7.31
 1.07 Intr +  34000  34052   53  0  2   34  105     2 0.005  -6.71
 1.08 Intr +  37676  37871  196  2  1   30  113   183 0.139  13.50
 1.09 Intr +  45907  46016  110  0  2   80   56    39 0.006  -1.94
 1.10 Intr +  57697  57828  132  1  0   74   91    38 0.019   1.54
 1.11 Term +  63680  63815  136  2  1  105   33   107 0.625   3.41
 1.12 PlyA +  63902  63907    6                               1.05

 2.03 PlyA -  64369  64364    6                               1.05
 2.02 Term -  74006  73935   72  2  0   62   41   121 0.457   1.73
 2.01 Init -  75433  75311  123  1  0   90   80    32 0.410   2.82
 2.00 Prom -  91293  91254   40                              -2.95

 3.06 PlyA -  92203  92198    6                               1.05
 3.05 Term -  93135  92538  598  2  1   65   49   389 0.343  25.71
 3.04 Intr -  94210  94111  100  2  1   65   36    56 0.040  -3.65
 3.03 Intr -  97008  96889  120  1  0   44   52   103 0.076   1.85
 3.02 Intr -  97244  97178   67  2  1   96   64    44 0.106   0.36
 3.01 Init -  98360  98277   84  2  0   71   98    84 0.171   8.57
 3.00 Prom -  98998  98959   40                              -8.45

 4.06 PlyA -  99703  99698    6                               1.05
 4.05 Term - 100661  99998  664  1  1   41   49   426 0.928  26.35
 4.04 Intr - 101732 101371  362  2  2   57  103   133 0.914   4.79
 4.03 Intr - 102602 102451  152  0  2   97   91   184 0.964  18.56
 4.02 Intr - 103486 103421   66  2  0   98   87    14 0.544   0.26
 4.01 Init - 103716 103623   94  0  1   60  114   101 0.544  10.49
 4.00 Prom - 105164 105125   40                              -6.15

 5.00 Prom + 105291 105330   40                             -10.25
 5.01 Init + 106576 106788  213  0  0   65   -5   277 0.687  14.89
 5.02 Intr + 107509 107651  143  0  2   92   -1   100 0.275  -0.27
 5.03 Term + 107853 108285  433  0  1   56   48   183 0.202   4.88
 5.04 PlyA + 108289 108294    6                              -0.45

 6.08 PlyA - 108681 108676    6                               1.05
 6.07 Term - 110495 110251  245  0  2   77   32   200 0.353   8.38
 6.06 Intr - 110760 110549  212  2  2   68   23   139 0.323   3.03
 6.05 Intr - 115908 115574  335  0  2   20   62   262 0.294  10.24
 6.04 Intr - 122250 122210   41  1  2   81   74    12 0.014  -3.88
 6.03 Intr - 133073 132893  181  2  1   55   85   107 0.160   5.62
 6.02 Intr - 143142 142967  176  1  2   48   79    92 0.804   3.04
 6.01 Init - 144822 144762   61  0  1   55  116    85 0.974   9.46
 6.00 Prom - 146429 146390   40                              -8.15

 7.03 PlyA - 147455 147450    6                               1.05
 7.02 Term - 147840 147706  135  0  0   61   48   148 0.607   5.14
 7.01 Init - 155684 155541  144  2  0   94   37    70 0.434   2.68
 7.00 Prom - 159276 159237   40                              -6.05

 8.03 PlyA - 159351 159346    6                               1.05
 8.02 Term - 173863 173384  480  1  0   39   42   252 0.819   9.51
 8.01 Init - 191259 191107  153  0  0   79   44   163 0.624  11.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_1|524_aa
CGPVANRPRTSTGLGTSFIRDLRGDENIAYLHRINVNILVLTLFYGPARYYYWGKLGKGY
TGSFYFLQLHACARRLISCVGNEAESGSGRATVISEPHCPPSMVWALRTANWHLCSPGQY
LKVAIKLTSLSNEAAPPSQVACGCPFHTVSHLEALSMFFRNEEKKKRKNKNKQEEEEEEA
KKEKSKDLEVLGPHSHLAAIVGESSQQNWRVVGPPQPMVVVDMLLVLKYPAKFKCRMSSM
SFLGPHSSCWSSEKAQGSRAYYYLNQVAFSETEESCGLPPGKGVPGQLWSLTVGAAAWVL
LALHGPSYTLEAKPLQKSCGDGVRSFTQNAWCGCKKLMSLGALVNWNWGLGAAGLVELPL
LGHLNPQQADDRLQEKLHSDSKGPSPAPFHDALNDPASKTLPCSEETNHSSAIFTFKKLP
IHILSSPCLSVIKEQGFSHLKSTHTNKEKEKTQTNHTHSLEMRAGITKIKRTAFASRLPC
ALCAQATTDYLGQKNISASSALAGGSRTHIRIALKPSCHEKLIT

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_1|1575_bp
tgtggccccgttgctaacaggccacgaaccagtactgggttggggacttcttttataagg
gatctccgtggtgatgaaaatattgcgtatcttcaccgtatcaatgtcaacatcctggtt
ctgactttgttctatggtcctgcaagatattactattgggggaaactaggcaaaggatac
acaggatctttttatttcctacaactgcatgcctgtgcaagaagacttatttcctgtgtg
ggaaatgaagcagaaagtggcagtggacgagccaccgtcatttctgagccgcactgccca
cctagcatggtttgggctctcagaacagctaactggcacctttgctccccggggcagtat
ttgaaagtagcgattaaactcacatccctcagtaacgaagcggcacccccttcccaggta
gcatgtggttgtcctttccacacagtgtcacatttggaagctttgtccatgtttttcaga
aacgaagaaaagaagaagaggaagaataagaataagcaggaggaggaggaagaagaagca
aagaaagaaaagtctaaagatttggaagtcctgggcccacattcccacttggcagcaatt
gtgggtgagagttcccagcagaactggcgcgtggtaggtcctcctcaaccaatggtagtt
gttgatatgttattggtgctcaagtatccggccaagttcaagtgcagaatgagcagcatg
agcttcctggggccccacagcagctgctggtcctcagagaaagctcaaggcagccgtgct
tattattatttaaatcaggtagccttttcagaaactgaagaaagctgtggactccctcct
ggaaaaggagtcccagggcagctctggagcctgaccgtcggagcagctgcgtgggtcctg
ctcgctctccacgggccatcgtacacacttgaagccaaaccactgcagaagagttgtggg
gatggagtgagatcattcacgcagaatgcttggtgtggctgtaagaaactgatgtctcta
ggagccctggtcaactggaattggggacttggtgctgctggtttggttgagctgccgctg
ctaggccatctgaacccacagcaagctgatgatagactgcaggaaaagctccattcagat
agcaagggtccttcaccagccccattccatgacgcactcaacgaccctgcctccaagaca
ttgccctgctctgaagaaaccaaccactcatctgctatattcacctttaagaagttgcct
attcacatcctgtcatctccctgtctctcagtaataaaagagcaaggcttctcacacctg
aagagcacccacaccaacaaggagaaggagaaaacccaaacaaaccatacccacagcttg
gagatgagggctggtattacgaagataaaaagaacagcctttgcatctagactcccttgt
gccctctgtgcacaagccaccactgactacctggggcagaaaaatattagtgccagctca
gcactagctggcggcagtaggactcatatcaggatagccctgaagcccagctgtcatgag
aagctgataacataa

>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_2|64_aa
MTSACRFRKLNLIGDASLSSQTWKRAVSQIGEHVLCGAIIQPIRGPDEAVKLPAVPIRKD
CSGE

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_2|195_bp
atgactagtgcctgcaggttcagaaaacttaatttgattggagatgctagtttgtcttca
caaacatggaaaagagctgtaagtcagatcggagaacatgtcctatgtggagccattatc
cagcctatacgtggacctgatgaagctgtgaagctgccggctgtacctatcaggaaagac
tgcagtggagagtag

>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_3|322_aa
MGPFSVVPAFCKPVTRKDKWANDHGAPQIRREIQSTQLSSGFGNLQVLDNGALAKELAFL
TPQCPVGVTWEQHSHLCPEGPQLGQTPDSPGPSNAAFRSHRPAPPLSQFPQVKAGKYPLE
TGPCKSLGESRETTGGGRELLKRLRGSFLASCGEHPAHDPPTQASDGRRPPEAGLKLAAA
RGGAAGSPPGRRPVVSAGPVDAKARAPEHRASALRGGGGLGSTRAALFLLLCGLCGGQSV
VIVGVTTPGGDVGVLPAALRDRGPRQGGLRSPGFLLTWELRQAWPQGSRPGVPASRNRVC
SCPQDLAGAVPGPSRKCAHPGT

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_3|969_bp
atgggtcccttttcagttgtacctgcattttgtaaaccagtcaccagaaaagacaaatgg
gccaatgatcatggtgctcctcagataagaagagaaattcaatcaactcaattaagttcc
ggctttggaaacctccaagttttagataatggcgctctggctaaagagctggcttttcta
actccccagtgcccagtcggagttacctgggaacagcactcacatctctgccccgagggc
ccccagctggggcagacgccggactccccaggaccttcaaatgctgcctttaggagccac
aggcctgctccccctctatctcagtttccccaggtaaaagctggaaagtaccctttagag
acaggtccttgcaagtcacttggagagtccagagagactaccggaggaggcagggagttg
ctcaagaggctcagaggcagctttctggccagctgcggggaacatccggctcacgacccc
ccaacccaggcctccgacggccgccgccccccggaagcgggtctgaaactcgcagccgca
cgtggcggggccgccgggtcccctccagggcggcggccggtggttagcgctggcccggtg
gatgcgaaggctcgagccccagaacatcgtgcctccgcgctcagaggcgggggtggcttg
gggagtacgagggcagccctcttcctactcctctgtggtctttgcgggggtcagagtgtg
gtgattgtgggtgtaacaacaccgggaggtgacgtgggcgttcttcccgccgcgctccgg
gaccgcggccccaggcagggtgggctccgaagcccaggcttcctcttgacgtgggaactg
agacaggcttggcctcagggctcccgacctggagtacctgcctcccggaaccgagtgtgc
agttgcccgcaagacttggccggcgctgtccccgggccctcgcggaagtgtgcccacccg
ggcacctag

>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_4|445_aa
MSYLKQPPYAVNGLSLTTSGMDLLHPSVGYPGLPSEEAVPGHLLTKQRTGVGKTTPRKQR
RERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQNMFMKATDISVSCKLG
KGLFQSRLEEVLALARLEPKSSLGENKWLQMVGGLELGLGGLTFTTVTAPIQRAHSKVQL
RICPPENASSSSSKPPRTPIIAPSLQNMNRAGKENCQDCSRGLKWNYQNRVKEFSFPSKV
WFKNRRAKCRQQQQQQQNGGQNKVRPAKKKTSPAREVSSESGTSGQFTPPSSTSVPTIAS
SSAPVSIWSPASISPLSDPLSTSSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSY
LTPMHHQLPGPGATLSPMGTNAVTSHLNQSPASLSTQGYGASSLGFNSTTDCLDYKDQTA
SWKLNFNADCLDYKDQTSSWKFQVL

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_4|1338_bp
atgtcttatcttaagcaaccgccttacgcagtcaatgggctgagtctgaccacttcgggt
atggacttgctgcacccctccgtgggctacccgggtttgccttctgaggaagcagtccca
gggcatttactgaccaagcagagaacaggggttgggaaaaccaccccccggaaacagcgc
cgggagaggacgacgttcactcgggcgcagctagatgtgctggaagcactgtttgccaag
acccggtacccagacatcttcatgcgagaggaggtggcactgaaaatcaacttgcccgag
tcgagggtgcagaatatgtttatgaaagcgacagacatcagtgtcagctgcaaattggga
aaggggctttttcaaagtaggttagaggaagttttagcacttgcaaggcttgaaccaaag
tcctcactaggagaaaacaaatggctccaaatggttggtggtcttgagcttggccttggt
ggcctcacttttaccacagttacggcacccatacagagagctcattcaaaagttcagcta
aggatttgtcctccagaaaatgccagtagttcctcttctaagccccctcgtacaccaatc
atagctccttcattgcagaacatgaacagggctggtaaagagaattgtcaagattgcagc
agggggttgaagtggaactatcaaaaccgagttaaagaattttctttcccttccaaggta
tggtttaagaatcgaagagctaagtgccgccaacaacagcaacaacagcagaatggaggt
caaaacaaagtgagacctgccaaaaagaagacatctccagctcgggaagtgagttcagag
agtggaacaagtggccaattcactcccccctctagcacctcagtcccgaccattgccagc
agcagtgctcctgtgtctatctggagcccagcttccatctccccactgtcagatcccttg
tccacctcctcttcctgcatgcagaggtcctatcccatgacctatactcaggcttcaggt
tatagtcaaggatatgctggctcaacttcctactttgggggcatggactgtggatcatat
ttgacccctatgcatcaccagcttcccggaccaggggccacactcagtcccatgggtacc
aatgcagtcaccagccatctcaatcagtccccagcttctctttccacccagggatatgga
gcttcaagcttgggttttaactcaaccactgattgcttggattataaggaccaaactgcc
tcctggaagcttaacttcaatgctgactgcttggattataaagatcagacatcctcgtgg
aaattccaggttttgtga

>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_5|262_aa
MERKQNYADWRLACGWEDDEEEERKKKETCGHRGKRPALASLRRTRVKVSGLGESNNSAT
REGGRKKRAKRVRAEGYVGRAATRQSHVEKTLFTFARPGDQGRGPRQPGVGRLRNYNPGG
RQGLERRPPAQADPQANRASGARAQGGAWLFIIVVSIHPSSYICIFLSRTLKRSLGSIQT
TPTKSGGQNAKIAGEAQNGVDIKTKPQTKPSKTPQITFAAFRRRFAEATTPRSTLSASLP
LPLSSLDHIFLFATIVITPQNL

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_5|789_bp
atggaaaggaaacaaaactacgcggactggcgactggcctgcggctgggaagacgacgaa
gaggaggaaagaaagaaaaaggagacgtgtgggcaccgcggaaaacggccggcgctggcc
tctctccggcgaactcgagtgaaagtttctggcctcggggaatcaaataactctgccacc
cgcgagggagggaggaagaaacgtgccaaaagggtgcgcgcggagggctacgtggggcgg
gccgcgacccggcaaagtcatgttgaaaaaacactcttcacgttcgctcggcctggtgac
cagggtcggggaccacgacaaccgggggttgggaggctgcgtaattacaacccagggggc
cgacaggggctcgagcggcggcccccggcccaggccgacccgcaagcgaaccgagcttcc
ggcgcgcgggcccaaggaggcgcctggctttttattattgttgtttcaatccatccatct
agttacatctgcatctttttgtctcggactctaaaaaggtccctgggatccatccaaacg
accccaaccaaatctgggggccaaaacgcaaagatcgcgggagaagcccagaacggcgtt
gacataaaaacaaaaccacaaacaaaaccttccaaaacaccccagattacattcgcagcg
tttcgacgacgttttgcagaagcgacgacccccaggagcacgctctctgcctctctccca
ctaccgctctcatctctagatcacatttttctttttgcaacgatcgttattacacctcaa
aatttgtaa

>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_6|416_aa
MCVETAQEKGLSNPMQNLAEVKVQGSGRGVRTVQSKPPHLINFSQLLLLATLLPPQLPLE
LTTESGTQRLSLYSRKRKKVGNCSHGCTSHLVFMGSTSELLNMILMAVGKEVECLKKGTK
VKGAPEPPPLQRVSLRPAAEGTFLLCPHSKMEGLGDCAGEEAGAEPVPRGVGPQARGAYP
FANIEALRGDQTEFAPSPSCHGPGDLRTAGANRVLESWRPGGPAASRTRPGTKGCHSFRY
EGGIPGVPQSRAVSPSSAHWVRGGRGRKETLLQVIEVDLPFLHRKHHDSDQAHPTSASDS
QRHEGHNARGICYPLLTTIPIKGFGGGRQVFQYSGETLDSWERDSQRVSGLELLQRAGKE
LGGLRAPRGLEGPPGPKALGTPVTGAAAAESPAPGRARAGARLPRACCLVRTPVIR

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_6|1251_bp
atgtgtgtggaaacggcacaagaaaagggcttgtccaatccaatgcagaatttagcagaa
gttaaagtacaagggagtggccggggagtgaggacggtgcagtccaaaccgcctcactta
attaatttcagccaactcctcctgctggccacgctgctgccgcctcaattacccttggag
ttaacaacggaaagcggcacacaaagactttcactttatagcaggaaaaggaaaaaggta
ggtaattgttctcacggttgtacttctcatttggtgtttatgggaagcacttcagaatta
cttaatatgattttaatggcagtgggaaaagaagttgaatgcttaaagaaaggaacaaag
gtaaaaggagccccggagccacctccgctgcagcgagtgtcactgaggccagctgcagag
ggcaccttcttgctgtgtcctcacagcaagatggaagggctgggagactgtgctggggaa
gaggcaggggcagagccagttccgaggggtgtaggaccccaagcaagaggggcctaccct
tttgcgaacatcgaagcacttcgtggagaccaaacagagtttgccccttccccaagctgt
cacggccccggggatcttaggactgcgggggcaaaccgcgtcctcgagtcctggcgcccc
ggagggccggcagcctcaaggaccaggcccggcaccaagggctgccactccttccgctac
gagggcgggatcccaggggtcccccagtcccgcgccgtctcccctagctcggcgcactgg
gtccgaggtggccggggtaggaaggagactctgcttcaggtgatcgaggtggatttgcct
ttccttcatcgaaagcatcatgactctgaccaagcgcacccaaccagtgcctccgacagc
cagcgccacgagggtcataacgcccggggcatttgttaccccctcctcaccaccatcccc
attaaaggcttcgggggcggccgccaggtgtttcagtacagtggggaaactcttgactcc
tgggaacgcgacagccagcgggtctccggactggagctgctgcagagggccgggaaggag
ctgggcgggctccgggcccctcgggggctcgaggggccgccagggcccaaagctctaggg
acacctgtgacaggggccgctgccgcggagtccccagccccaggccgagcccgagccgga
gcccggctgccgagagcttgctgcctcgtgcgcactcccgtaattcgttaa

>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_7|92_aa
MGRLWATKRQGRIGKHRKLFCQRCAGQFAVNRCGRQKRQEEGNFTNLSVSENLVGRRRRK
KKEEEKEEENEEKEEEQEDKDDLWLLCTAQRN

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_7|279_bp
atggggaggctgtgggcaacgaaaagacagggtcgaattggcaagcatagaaaactattt
tgccagcgatgtgcaggacagtttgcagtcaatcgatgtggaagacagaaaaggcaagaa
gaaggaaattttactaatctgagtgtttctgaaaaccttgtagggaggaggaggaggaag
aaaaaagaagaggagaaagaggaggagaatgaagagaaagaggaagaacaagaagacaag
gatgacttgtggttattgtgcacagcccagagaaattga

>gi568815584r:56701738_56905456|GENSCAN_predicted_peptide_8|210_aa
MGREKKEKKLDKEKQVHDAVKNSRDCQHSGCYVEPASCIVLGFRHPVLSGQPGQQSETPP
KKRKKRKDKTRKEKKRKEKRKKKKKKERKGRKEERKKKKERQRKKKERKRKKEEGKTKKE
ERKKERQRKKKERRKKERRRKEGGKEGRGERQKASEKQKERRKKEKGRKEGIKKEREKPE
NRKNWLLPPGLLIVKGCPFGLQEWKGQRAQ

>gi568815584r:56701738_56905456|GENSCAN_predicted_CDS_8|633_bp
atgggtagggaaaagaaggaaaagaagttggacaaagagaaacaagtacatgatgctgtg
aaaaacagcagagactgtcaacactcaggctgctacgttgaaccagcttcttgtattgtc
ttgggcttccggcatcctgttttatctggacagcctgggcaacagagtgagactccgcca
aaaaaaagaaagaaaagaaaagacaagacaagaaaagaaaagaaaagaaaagaaaaaaga
aagaaaaagaaaaagaaagaaagaaaaggaaggaaggaagaaagaaagaaaaagaaggaa
agacaaagaaagaagaaagaaagaaaaagaaagaaagaagaaggaaagacaaagaaagaa
gaaagaaagaaggaaagacaaagaaagaagaaagaaagaagaaagaaagaaagacgaagg
aaggaaggagggaaggaaggaaggggagagagacagaaagcaagcgagaaacagaaagaa
agaagaaagaaagaaaaaggaaggaaggaaggaataaagaaagagagagagaaaccagaa
aataggaaaaactggctgcttccccctggactgctgatagtaaaggggtgtccctttggc
cttcaggagtggaaaggccaaagagcgcaatga