Result of FASTA (omim) for pF1KB6346
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6346, 291 aa
  1>>>pF1KB6346 291 - 291 aa - 291 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4251+/-0.000269; mu= 16.3269+/- 0.017
 mean_var=93.8766+/-18.218, 0's: 0 Z-trim(121.8): 251  B-trim: 0 in 0/56
 Lambda= 0.132372
 statistics sampled from 38732 (39013) to 38732 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.799), E-opt: 0.2 (0.457), width:  16
 Scan time:  8.240

The best scores are:                                      opt bits E(85289)
NP_001662 (OMIM: 108360) asialoglycoprotein recept ( 291) 2082 406.9 2.3e-113
XP_011522163 (OMIM: 108360) PREDICTED: asialoglyco ( 291) 2082 406.9 2.3e-113
NP_001184145 (OMIM: 108360) asialoglycoprotein rec ( 252) 1657 325.7 5.6e-89
NP_550435 (OMIM: 108361) asialoglycoprotein recept ( 287) 1293 256.3 5.1e-68
XP_006721589 (OMIM: 108361) PREDICTED: asialoglyco ( 287) 1293 256.3 5.1e-68
XP_005256705 (OMIM: 108361) PREDICTED: asialoglyco ( 287) 1293 256.3 5.1e-68
NP_550436 (OMIM: 108361) asialoglycoprotein recept ( 292) 1273 252.4 7.4e-67
XP_016880140 (OMIM: 108361) PREDICTED: asialoglyco ( 292) 1273 252.4 7.4e-67
NP_001316999 (OMIM: 605999) C-type lectin domain f ( 289) 1251 248.2 1.3e-65
NP_006335 (OMIM: 605999) C-type lectin domain fami ( 292) 1250 248.1 1.5e-65
NP_001188281 (OMIM: 108361) asialoglycoprotein rec ( 306) 1228 243.9 2.9e-64
XP_016880142 (OMIM: 108361) PREDICTED: asialoglyco ( 311) 1208 240.1 4.2e-63
NP_550434 (OMIM: 108361) asialoglycoprotein recept ( 311) 1208 240.1 4.2e-63
NP_001172 (OMIM: 108361) asialoglycoprotein recept ( 311) 1208 240.1 4.2e-63
XP_016880141 (OMIM: 108361) PREDICTED: asialoglyco ( 311) 1208 240.1 4.2e-63
XP_006721587 (OMIM: 108361) PREDICTED: asialoglyco ( 248) 1060 211.7 1.2e-54
XP_011522167 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 1060 211.8 1.3e-54
XP_011522165 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 1060 211.8 1.3e-54
XP_011522168 (OMIM: 108361) PREDICTED: asialoglyco ( 299) 1060 211.8 1.3e-54
XP_011522166 (OMIM: 108361) PREDICTED: asialoglyco ( 318) 1055 210.8 2.7e-54
XP_011522164 (OMIM: 108361) PREDICTED: asialoglyco ( 410) 1055 211.0 3.2e-54
NP_878910 (OMIM: 605999) C-type lectin domain fami ( 316)  918 184.7   2e-46
XP_011521915 (OMIM: 605999) PREDICTED: C-type lect ( 319)  917 184.5 2.3e-46
XP_011521916 (OMIM: 605999) PREDICTED: C-type lect ( 319)  917 184.5 2.3e-46
XP_011521917 (OMIM: 605999) PREDICTED: C-type lect ( 315)  887 178.8 1.2e-44
NP_001138367 (OMIM: 604672,607948,609423,614371) C ( 312)  391 84.0 3.9e-16
XP_016882280 (OMIM: 616838) PREDICTED: C-type lect ( 243)  380 81.8 1.4e-15
XP_016882279 (OMIM: 616838) PREDICTED: C-type lect ( 293)  379 81.7 1.8e-15
XP_016882276 (OMIM: 616838) PREDICTED: C-type lect ( 310)  379 81.7 1.9e-15
XP_016882277 (OMIM: 616838) PREDICTED: C-type lect ( 310)  379 81.7 1.9e-15
XP_016882278 (OMIM: 616838) PREDICTED: C-type lect ( 310)  379 81.7 1.9e-15
XP_016882275 (OMIM: 616838) PREDICTED: C-type lect ( 310)  379 81.7 1.9e-15
XP_016882274 (OMIM: 616838) PREDICTED: C-type lect ( 310)  379 81.7 1.9e-15
NP_001191047 (OMIM: 616838) C-type lectin domain f ( 378)  379 81.8 2.2e-15
XP_011524043 (OMIM: 607621) PREDICTED: collectin-1 ( 725)  379 82.1 3.5e-15
NP_569057 (OMIM: 607621) collectin-12 [Homo sapien ( 742)  379 82.1 3.6e-15
XP_005272529 (OMIM: 604672,607948,609423,614371) P ( 266)  370 80.0 5.6e-15
NP_001138379 (OMIM: 605872) C-type lectin domain f ( 332)  366 79.3 1.1e-14
NP_001138365 (OMIM: 604672,607948,609423,614371) C ( 268)  364 78.8 1.3e-14
NP_001138366 (OMIM: 604672,607948,609423,614371) C ( 360)  363 78.7 1.8e-14
NP_001138368 (OMIM: 604672,607948,609423,614371) C ( 380)  363 78.8 1.8e-14
NP_001193948 (OMIM: 151445) low affinity immunoglo ( 320)  362 78.5 1.9e-14
NP_001993 (OMIM: 151445) low affinity immunoglobul ( 321)  362 78.5 1.9e-14
XP_005272519 (OMIM: 151445) PREDICTED: low affinit ( 321)  362 78.5 1.9e-14
NP_001207429 (OMIM: 151445) low affinity immunoglo ( 321)  362 78.5 1.9e-14
NP_066978 (OMIM: 604672,607948,609423,614371) CD20 ( 404)  363 78.8 1.9e-14
NP_001138371 (OMIM: 604672,607948,609423,614371) C ( 243)  360 78.0   2e-14
NP_001138378 (OMIM: 605872) C-type lectin domain f ( 263)  358 77.7 2.7e-14
NP_001138381 (OMIM: 605872) C-type lectin domain f ( 353)  359 78.0   3e-14
XP_006722677 (OMIM: 605872) PREDICTED: C-type lect ( 343)  357 77.6 3.8e-14


>>NP_001662 (OMIM: 108360) asialoglycoprotein receptor 1  (291 aa)
 initn: 2082 init1: 2082 opt: 2082  Z-score: 2156.3  bits: 406.9 E(85289): 2.3e-113
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
              190       200       210       220       230       240

              250       260       270       280       290 
pF1KB6 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
              250       260       270       280       290 

>>XP_011522163 (OMIM: 108360) PREDICTED: asialoglycoprot  (291 aa)
 initn: 2082 init1: 2082 opt: 2082  Z-score: 2156.3  bits: 406.9 E(85289): 2.3e-113
Smith-Waterman score: 2082; 100.0% identity (100.0% similar) in 291 aa overlap (1-291:1-291)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
              190       200       210       220       230       240

              250       260       270       280       290 
pF1KB6 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
              250       260       270       280       290 

>>NP_001184145 (OMIM: 108360) asialoglycoprotein recepto  (252 aa)
 initn: 1657 init1: 1657 opt: 1657  Z-score: 1718.5  bits: 325.7 E(85289): 5.6e-89
Smith-Waterman score: 1726; 86.3% identity (86.6% similar) in 291 aa overlap (1-291:1-252)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       :::::::::::::::::::::::                                     
NP_001 MTKEYQDLQHLDNEESDHHQLRK-------------------------------------
               10        20                                        

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
         .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 --DSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
              30        40        50        60        70        80 

              130       140       150       160       170       180
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
              90       100       110       120       130       140 

              190       200       210       220       230       240
pF1KB6 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
             150       160       170       180       190       200 

              250       260       270       280       290 
pF1KB6 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       :::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
             210       220       230       240       250  

>>NP_550435 (OMIM: 108361) asialoglycoprotein receptor 2  (287 aa)
 initn: 1240 init1: 1240 opt: 1293  Z-score: 1342.1  bits: 256.3 E(85289): 5.1e-68
Smith-Waterman score: 1293; 61.2% identity (86.7% similar) in 278 aa overlap (1-278:1-277)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       :.:..::.:.:..::.::  ...:::: ::: :::::   . ::.:....:::::.:: :
NP_550 MAKDFQDIQQLSSEENDH-PFHQGPPPAQPLAQRLCSMVCFSLLALSFNILLLVVICVTG
               10         20        30        40        50         

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
       ::..::: :::.:.:.::::..:: ..:...::.::.:: :. :: ..:::::.::. ::
NP_550 SQSAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVGDKITSLGAKLEKQQQDLKADH
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
       ..::.:.:.:  ::: ..:::  :..:::.:::::::::::. ::::::.::::::.:..
NP_550 DALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEK
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KB6 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
       ::.::.:::::..:::::::. .: .: :::.:: :..: :::::::::. ..:::   :
NP_550 YCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKNWAVTQ
     180       190       200       210       220       230         

              250       260       270       280       290 
pF1KB6 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       ::.:.:: :::.:::..   ::::::: : . ::::::             
NP_550 PDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKRRNATGEVA   
     240       250       260       270       280          

>>XP_006721589 (OMIM: 108361) PREDICTED: asialoglycoprot  (287 aa)
 initn: 1240 init1: 1240 opt: 1293  Z-score: 1342.1  bits: 256.3 E(85289): 5.1e-68
Smith-Waterman score: 1293; 61.2% identity (86.7% similar) in 278 aa overlap (1-278:1-277)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       :.:..::.:.:..::.::  ...:::: ::: :::::   . ::.:....:::::.:: :
XP_006 MAKDFQDIQQLSSEENDH-PFHQGPPPAQPLAQRLCSMVCFSLLALSFNILLLVVICVTG
               10         20        30        40        50         

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
       ::..::: :::.:.:.::::..:: ..:...::.::.:: :. :: ..:::::.::. ::
XP_006 SQSAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVGDKITSLGAKLEKQQQDLKADH
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
       ..::.:.:.:  ::: ..:::  :..:::.:::::::::::. ::::::.::::::.:..
XP_006 DALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEK
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KB6 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
       ::.::.:::::..:::::::. .: .: :::.:: :..: :::::::::. ..:::   :
XP_006 YCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKNWAVTQ
     180       190       200       210       220       230         

              250       260       270       280       290 
pF1KB6 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       ::.:.:: :::.:::..   ::::::: : . ::::::             
XP_006 PDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKRRNATGEVA   
     240       250       260       270       280          

>>XP_005256705 (OMIM: 108361) PREDICTED: asialoglycoprot  (287 aa)
 initn: 1240 init1: 1240 opt: 1293  Z-score: 1342.1  bits: 256.3 E(85289): 5.1e-68
Smith-Waterman score: 1293; 61.2% identity (86.7% similar) in 278 aa overlap (1-278:1-277)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       :.:..::.:.:..::.::  ...:::: ::: :::::   . ::.:....:::::.:: :
XP_005 MAKDFQDIQQLSSEENDH-PFHQGPPPAQPLAQRLCSMVCFSLLALSFNILLLVVICVTG
               10         20        30        40        50         

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
       ::..::: :::.:.:.::::..:: ..:...::.::.:: :. :: ..:::::.::. ::
XP_005 SQSAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVGDKITSLGAKLEKQQQDLKADH
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAWADADN
       ..::.:.:.:  ::: ..:::  :..:::.:::::::::::. ::::::.::::::.:..
XP_005 DALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAWAEAEK
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KB6 YCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPEQ
       ::.::.:::::..:::::::. .: .: :::.:: :..: :::::::::. ..:::   :
XP_005 YCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKNWAVTQ
     180       190       200       210       220       230         

              250       260       270       280       290 
pF1KB6 PDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       ::.:.:: :::.:::..   ::::::: : . ::::::             
XP_005 PDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKRRNATGEVA   
     240       250       260       270       280          

>>NP_550436 (OMIM: 108361) asialoglycoprotein receptor 2  (292 aa)
 initn: 1160 init1: 1061 opt: 1273  Z-score: 1321.3  bits: 252.4 E(85289): 7.4e-67
Smith-Waterman score: 1273; 60.1% identity (85.2% similar) in 283 aa overlap (1-278:1-282)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       :.:..::.:.:..::.::  ...:::: ::: :::::   . ::.:....:::::.:: :
NP_550 MAKDFQDIQQLSSEENDH-PFHQGPPPAQPLAQRLCSMVCFSLLALSFNILLLVVICVTG
               10         20        30        40        50         

                    70        80        90       100       110     
pF1KB6 SQN-----SQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKD
       ::.     .::: :::.:.:.::::..:: ..:...::.::.:: :. :: ..:::::.:
NP_550 SQSEGHRGAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVGDKITSLGAKLEKQQQD
      60        70        80        90       100       110         

         120       130       140       150       160       170     
pF1KB6 LSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAW
       :. ::..::.:.:.:  ::: ..:::  :..:::.:::::::::::. ::::::.:::::
NP_550 LKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAW
     120       130       140       150       160       170         

         180       190       200       210       220       230     
pF1KB6 ADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKN
       :.:..::.::.:::::..:::::::. .: .: :::.:: :..: :::::::::. ..::
NP_550 AEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKN
     180       190       200       210       220       230         

         240       250       260       270       280       290 
pF1KB6 WRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       :   :::.:.:: :::.:::..   ::::::: : . ::::::             
NP_550 WAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKRRNATGEVA   
     240       250       260       270       280       290     

>>XP_016880140 (OMIM: 108361) PREDICTED: asialoglycoprot  (292 aa)
 initn: 1157 init1: 1058 opt: 1273  Z-score: 1321.3  bits: 252.4 E(85289): 7.4e-67
Smith-Waterman score: 1273; 60.1% identity (85.2% similar) in 283 aa overlap (1-278:1-282)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       :.:..::.:.:..::.::  ...:::: ::: :::::   . ::.:....:::::.:: :
XP_016 MAKDFQDIQQLSSEENDH-PFHQGPPPAQPLAQRLCSMVCFSLLALSFNILLLVVICVTG
               10         20        30        40        50         

                    70        80        90       100       110     
pF1KB6 SQN-----SQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKD
       ::.     .::: :::.:.:.::::..:: ..:...::.::.:: :. :: ..:::::.:
XP_016 SQSEGHGGAQLQAELRSLKEAFSNFSSSTLTEVQAISTHGGSVGDKITSLGAKLEKQQQD
      60        70        80        90       100       110         

         120       130       140       150       160       170     
pF1KB6 LSEDHSSLLLHVKQFVSDLRSLSCQMAALQGNGSERTCCPVNWVEHERSCYWFSRSGKAW
       :. ::..::.:.:.:  ::: ..:::  :..:::.:::::::::::. ::::::.:::::
XP_016 LKADHDALLFHLKHFPVDLRFVACQMELLHSNGSQRTCCPVNWVEHQGSCYWFSHSGKAW
     120       130       140       150       160       170         

         180       190       200       210       220       230     
pF1KB6 ADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKN
       :.:..::.::.:::::..:::::::. .: .: :::.:: :..: :::::::::. ..::
XP_016 AEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSDGSWKWVDGTDYRHNYKN
     180       190       200       210       220       230         

         240       250       260       270       280       290 
pF1KB6 WRPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       :   :::.:.:: :::.:::..   ::::::: : . ::::::             
XP_016 WAVTQPDNWHGHELGGSEDCVEVQPDGRWNDDFCLQVYRWVCEKRRNATGEVA   
     240       250       260       270       280       290     

>>NP_001316999 (OMIM: 605999) C-type lectin domain famil  (289 aa)
 initn: 808 init1: 808 opt: 1251  Z-score: 1298.7  bits: 248.2 E(85289): 1.3e-65
Smith-Waterman score: 1251; 58.7% identity (85.4% similar) in 288 aa overlap (1-287:1-287)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       ::. :...:.:.:. . .  ...:: : : :::::::::  :::::::.:::::..::.:
NP_001 MTRTYENFQYLENKVKVQG-FKNGPLPLQSLLQRLCSGPCHLLLSLGLGLLLLVIICVVG
               10         20        30        40        50         

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
        :::..:..:  ::  :::::..: :....:..::... . . ::....:  ... .  :
NP_001 FQNSKFQRDLVTLRTDFSNFTSNTVAEIQALTSQGSSLEETIASLKAEVEGFKQERQAVH
      60        70        80        90       100       110         

              130       140        150       160       170         
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNGS-ERTCCPVNWVEHERSCYWFSRSGKAWADAD
       : .::.:.:.:.::..:.::.:.:..:.: : ::::::::::. ::::::.:: .::.:.
NP_001 SEMLLRVQQLVQDLKKLTCQVATLNNNASTEGTCCPVNWVEHQDSCYWFSHSGMSWAEAE
     120       130       140       150       160       170         

     180       190       200       210       220       230         
pF1KB6 NYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNWRPE
       .::.:..:::::..: :::.:::...: . ::::: : .: ::::::::: :::.::.: 
NP_001 KYCQLKNAHLVVINSREEQNFVQKYLGSAYTWMGLSDPEGAWKWVDGTDYATGFQNWKPG
     180       190       200       210       220       230         

     240       250       260       270       280       290 
pF1KB6 QPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       ::::: :::::::::::::  :::::::::::::.::::. : ..:::    
NP_001 QPDDWQGHGLGGGEDCAHFHPDGRWNDDVCQRPYHWVCEAGLGQTSQESH  
     240       250       260       270       280           

>>NP_006335 (OMIM: 605999) C-type lectin domain family 1  (292 aa)
 initn: 1258 init1: 808 opt: 1250  Z-score: 1297.6  bits: 248.1 E(85289): 1.5e-65
Smith-Waterman score: 1250; 58.1% identity (84.5% similar) in 291 aa overlap (1-287:1-290)

               10        20        30        40        50        60
pF1KB6 MTKEYQDLQHLDNEESDHHQLRKGPPPPQPLLQRLCSGPRLLLLSLGLSLLLLVVVCVIG
       ::. :...:.:.:. . .  ...:: : : :::::::::  :::::::.:::::..::.:
NP_006 MTRTYENFQYLENKVKVQG-FKNGPLPLQSLLQRLCSGPCHLLLSLGLGLLLLVIICVVG
               10         20        30        40        50         

               70        80        90       100       110       120
pF1KB6 SQNSQLQEELRGLRETFSNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDH
        :::..:..:  ::  :::::..: :....:..::... . . ::....:  ... .  :
NP_006 FQNSKFQRDLVTLRTDFSNFTSNTVAEIQALTSQGSSLEETIASLKAEVEGFKQERQAVH
      60        70        80        90       100       110         

              130       140           150       160       170      
pF1KB6 SSLLLHVKQFVSDLRSLSCQMAALQGNG----SERTCCPVNWVEHERSCYWFSRSGKAWA
       : .::.:.:.:.::..:.::.:.:..::    .: ::::::::::. ::::::.:: .::
NP_006 SEMLLRVQQLVQDLKKLTCQVATLNNNGEEASTEGTCCPVNWVEHQDSCYWFSHSGMSWA
     120       130       140       150       160       170         

        180       190       200       210       220       230      
pF1KB6 DADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNTWMGLHDQNGPWKWVDGTDYETGFKNW
       .:..::.:..:::::..: :::.:::...: . ::::: : .: ::::::::: :::.::
NP_006 EAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYTWMGLSDPEGAWKWVDGTDYATGFQNW
     180       190       200       210       220       230         

        240       250       260       270       280       290 
pF1KB6 RPEQPDDWYGHGLGGGEDCAHFTDDGRWNDDVCQRPYRWVCETELDKASQEPPLL
       .: ::::: :::::::::::::  :::::::::::::.::::. : ..:::    
NP_006 KPGQPDDWQGHGLGGGEDCAHFHPDGRWNDDVCQRPYHWVCEAGLGQTSQESH  
     240       250       260       270       280       290    




291 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 11:01:56 2016 done: Sat Nov  5 11:01:57 2016
 Total Scan time:  8.240 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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