GENSCAN 1.0	Date run:  8-Nov-116	Time: 01:26:10

Sequence gi568815594r:45940991_46223913 : 282923 bp : 34.67% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    219    214    6                               1.05
 1.01 Sngl -  20907  20593  315  0  0   54   39   208 0.389   8.20
 1.00 Prom -  22360  22321   40                              -2.05

 2.04 PlyA -  22477  22472    6                               1.05
 2.03 Term -  25162  25011  152  2  2  -21   53   155 0.365  -1.81
 2.02 Intr -  28120  28033   88  1  1   35   83    60 0.121  -1.18
 2.01 Init -  32220  32173   48  0  0  103  107    25 0.462   6.90
 2.00 Prom -  40330  40291   40                              -3.05

 3.02 PlyA -  41245  41240    6                               1.05
 3.01 Sngl -  59561  59007  555  2  0   66   42   168 0.851   5.87
 3.00 Prom -  60020  59981   40                              -5.05

 4.04 PlyA -  60200  60195    6                               1.05
 4.03 Term -  61358  61122  237  2  0   67   54   161 0.589   5.78
 4.02 Intr -  70754  70684   71  0  2   99  103    17 0.112   2.28
 4.01 Init -  79463  79403   61  2  1   92   12    71 0.111   1.36
 4.00 Prom -  97039  97000   40                              -2.15

 5.13 PlyA -  97701  97696    6                               1.05
 5.12 Term - 110648 110588   61  1  1  114   45    65 0.317   1.10
 5.11 Intr - 113890 113239  652  2  1   71   39   342 0.238  17.64
 5.10 Intr - 117632 117495  138  0  0   85   58    75 0.864   3.71
 5.09 Intr - 123533 123451   83  1  2   59   87    48 0.049   0.16
 5.08 Intr - 124594 124374  221  1  2   99   85    87 0.079   5.68
 5.07 Intr - 132935 132870   66  2  0   79   75    43 0.052   0.28
 5.06 Intr - 143063 142996   68  0  2   86  115    72 0.803   7.41
 5.05 Intr - 156359 156211  149  1  2   42   99   203 0.957  15.76
 5.04 Intr - 183984 183901   84  2  0   68   49    82 0.000   0.32
 5.03 Intr - 207261 207163   99  2  0   45  101    75 0.098   2.81
 5.02 Intr - 216799 216736   64  2  1   59   97    79 0.086   2.76
 5.01 Init - 217358 216998  361  2  1   74   97   106 0.052   7.43
 5.00 Prom - 221417 221378   40                              -7.05

 6.02 PlyA - 221649 221644    6                               1.05
 6.01 Sngl - 224991 224521  471  0  0   42   54   248 0.937  12.67
 6.00 Prom - 225944 225905   40                              -5.75

 7.00 Prom + 228600 228639   40                              -3.25
 7.01 Sngl + 238035 238451  417  2  0   53   36   255 0.985  12.85
 7.02 PlyA + 240278 240283    6                               1.05

 8.00 Prom + 242205 242244   40                              -3.15
 8.01 Init + 251001 251055   55  2  1   85  100    17 0.179   4.11
 8.02 Term + 273271 274367 1097  2  2   60   49   362 0.457  20.75
 8.03 PlyA + 274422 274427    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 183366 183437   72  2  0  103   79    65 0.925   5.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_1|104_aa
MRRGLLSCRPQNGRSTNSFHGLPGKATDPQCQPMKAAVREAVPCKATGVELPKTMGTHLL
HQHDLDVRPGIKGNHFEAFKFDCPAEFQICMGPVTPLFWPIYPI

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_1|315_bp
atgagaagagggctactgtcctgcagaccccagaatggtagatccaccaacagctttcat
ggattgcctggaaaagccacagaccctcagtgccagcccatgaaagcagctgtgagggag
gctgtgccttgcaaagccacaggtgtggagctgccaaagaccatgggaacccacctcttg
catcagcatgacctggatgtgagacctggaatcaaaggaaatcattttgaagctttcaaa
tttgactgccctgctgaatttcagatttgcatgggtcctgtaacccccttgttttggcca
atttaccccatttag

>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_2|95_aa
MGTGLWPFRNRATQQEACGNHRDNTAHKIKEKENAEHHRKPPNHRAKWNSSHQGPETTGV
LLMDLQREADSGWKEGTEAGLNGEKAGKSARVNEY

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_2|288_bp
atggggactggtctttggccttttaggaaccgggccacacagcaggaggcctgtggtaac
cacagagacaatacagcacataaaatcaaagagaaagaaaatgcagagcaccatagaaaa
ccaccaaaccacagagctaagtggaatagctcccaccaagggcctgagacgactggtgtg
cttctgatggatcttcagagagaagctgatagtggatggaaggaaggcacagaagctggg
ctgaatggggaaaaagctgggaaatctgcaagggttaatgagtactga

>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_3|184_aa
MYQNLWDTVKAMFREKFIALNPHRRKQERLKINTLTSQLKEKQEQTNSKASRIQEITKIR
AELKETETRKILQKINEPRSWFFEKINKIDSPLARLIKMKREKNKIDTIKNDKGDITNDR
TEIQSAIREYYKHFYPNKLKNLEEMYEFLDTYTLLRLNQEEVESLNRPIKSFEIEAVINS
LPTK

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_3|555_bp
atgtaccagaatctctgggacacagttaaagcaatgtttagagagaaatttatagcacta
aatccccacagaagaaagcaggaaagattgaaaatcaacaccctaacatcacaattaaaa
gagaagcaagagcaaacaaattcaaaagctagcagaattcaagaaataactaagatcaga
gcagaactgaaggagacagagacacgaaaaatccttcaaaaaatcaatgaacccaggagc
tggttttttgaaaagattaacaaaatagatagtccgctagccagactaataaagatgaaa
agagagaagaataaaatagacacaataaaaaatgataaaggggatatcaccaacgatcgc
acagaaatacaaagtgccatcagagaatactataaacacttctacccaaataaactaaaa
aatctagaagaaatgtatgaattcctagacacatataccctcttaagactaaaccaggaa
gaagtcgaatccctgaatagaccaataaaaagttttgaaattgaggcagtaattaatagc
ctaccaaccaaataa

>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_4|122_aa
MGLNNGNARYTISFNSSTTEEAARHWLCPNSGVRWTAFPCESSQEHNSSPSREQNWTENE
FDKLTEVGFRRWVITNSSKLKEHALTQCKEAKNLEKRLDKLLTRKTSLEKIINDLMELKN
IA

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_4|369_bp
atgggattaaataatggcaatgctcgatacacgatttcatttaattccagtactactgaa
gaggctgcaaggcactggctgtgccccaattctggcgtgaggtggacagctttcccctgt
gagtcctcccaggaacacaactcctcaccatcaagggaacaaaactggacagagaatgag
tttgacaaattgacagaagtaggcttcagaaggtgggtgataacaaactcctccaagcta
aaggagcatgctctaacccaatgcaaggaagctaagaaccttgaaaaaaggttagacaaa
ttgctaactagaaaaaccagtttagagaagatcataaatgacctgatggagctgaaaaac
atagcatga

>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_5|681_aa
MVGSANYMSVSPLPHVFSCKVSALVRGNAVWNTMMVDKAFSESTDGSLGRNIAFRIGKPI
AGVSVYSSDDKPPPFPRWKSSNTINLLVDHPRNGAISRAQCWCLLLANWALSSDISKVSL
DIDGKADGSMGQGGDVATTGDRKKCRNLTGKLKESTDPVQEAADYTLLHKKGKKICSSCQ
RLSGYHGNRRALLGTQSRASEVSVDKADDEDDEDLTVNKTWVLAPKIHEGDITQILNSLL
QGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMLPMVNNDPKIGEHSTVRYFEKKEYT
IDIIFAQTWFDSRLKFNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRI
WNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADP
KYWRLYQFAFVGLRNSTEITHTISVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIV
YLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMGELPFTIASKRI
KYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFN
AIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKT
AWYHYSSDYDNPEYNCQEVFT

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_5|2046_bp
atggtaggatcagcgaattacatgagcgtgagcccactgccacacgtctttagctgtaaa
gtgagtgccttggtcagaggcaacgctgtgtggaataccatgatggtggataaggcattt
agtgagtccacagatggtagtcttggcagaaacattgcattcaggataggcaaacccata
gctggagtaagtgtctattccagtgatgataaacctcctccctttccaagatggaagagt
tccaatacaatcaacctgctagttgatcaccccaggaatggtgccatatcgagggctcag
tgttggtgtctgctgctggcaaattgggcactcagcagtgacattagcaaggtcagcctt
gatatagatggaaaggctgatggcagcatgggtcagggaggggatgttgccactactggg
gacaggaagaaatgcaggaacttaacaggaaaactgaaagaatccacagaccctgtgcaa
gaagcagcagactataccctgctccataaaaaaggaaaaaaaatttgttccagctgccag
aggctttctggttaccatggcaaccgtcgggctctgctaggaactcaaagcagagcctct
gaagttagtgttgataaggcagatgatgaagatgatgaggatttaacggtgaacaaaacc
tgggtcttggccccaaaaattcatgaaggagatatcacacaaattctgaattcattgctt
caaggctatgacaataaacttcgtccagatataggagtgaggcccacagtaattgaaact
gatgtttatgtaaacagcattggaccagttgatccaattaatatgttacccatggtcaac
aatgatccaaaaataggtgaacacagtacagtaagatattttgaaaagaaggaatataca
atagatataatttttgcccaaacctggtttgacagtcgtttaaaattcaatagtaccatg
aaagtgcttatgcttaacagtaatatggttggaaaaatttggattcctgacactttcttc
agaaactcaagaaaatctgatgctcactggataacaactcctaatcgtctgcttcgaatt
tggaatgatggacgagttctgtatactctaagattgacaattaatgcagaatgttatctt
cagcttcataactttcccatggatgaacattcctgtccactggaattttcaagctatgga
taccctaaaaatgaaattgagtataagtggaaaaagccctccgtagaagtggctgatcct
aaatactggagattatatcagtttgcatttgtagggttacggaactcaactgaaatcact
cacacgatctctgtgttggaagttctggccagggcaatcaggcaggagaaggaaataaag
ggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtt
tatctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagc
aaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaac
agacaaacagagagccaaatcatgggtgaactcccattcacaattgcttcaaagagaata
aaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaa
ccactgctcaaggaaataaaagaggacacaaacaaatggaagaacattccatgctcatgg
gtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaat
gccatccccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaag
ttcatatggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaa
gctggaggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaaca
gcatggtatcactacagttctgactatgacaaccctgagtacaattgccaggaagtcttt
acctaa

>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_6|156_aa
MIISIDAEKAFDKIQQSFMLKTLNKLGIDGTYLKITRAIYDKPTANIILNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARSVRQEKEIKGIRLGKEEVKLSVFADGMIVYLENPIVS
AQNLLKPISNFSKVSGYRLIFVKYFISKARPGFETI

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_6|471_bp
atgattatctcaatagatgcagaaaaggcctttgacaaaattcaacagtccttcatgcta
aaaactctcaataaattaggtattgatgggacgtatctcaaaataacaagagctatctat
gacaaacccacagccaatatcatactgaatggacaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccaggtcagtcaggcaggagaaagaaataaagggtattcgattaggaaaagaggaa
gtcaaattgtccgtgtttgcagatggcatgattgtatatttagaaaaccccatcgtctca
gcccaaaatctccttaagccgataagcaacttcagcaaagtctcaggatacaggttaata
tttgtaaaatatttcatatcgaaagctagacctggttttgagactatttga

>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_7|138_aa
MWESLELSRDLLNGFDQNADSDMNNKVEAEVVSDGDEELFGNWSKDDSCYVLAKRLVIFF
PCHRDMWNFEFERDDLEYLAEEISQQQSIQDVTWVLLKAFSFLREAEHKSSENLPPDNVI
EKNIAFSEEKFKPAQEFV

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_7|417_bp
atgtgggaaagtttagagctttctagagacttgttgaatggctttgaccaaaatgctgat
agtgatatgaacaataaagttgaggctgaggtggtctcagatggagatgaggaacttttt
gggaactggagcaaagatgactcttgttatgttttagcaaaaagactagtaatatttttc
ccctgtcatagagatatgtggaactttgaatttgagagagatgatttagagtatttggct
gaagaaatttctcagcagcaaagcattcaagatgtgacttgggtgctgttaaaggcattc
agttttctaagggaagcagaacataaaagttcagaaaacttgccacctgacaatgtgata
gaaaagaacattgcattttctgaggagaaattcaagccagcacaggaatttgtgtaa

>gi568815594r:45940991_46223913|GENSCAN_predicted_peptide_8|383_aa
MLPPNLLGENLSVPLSASMLEVLAGAIRQEKEIKDIQLGKEEVKLSLYAYDMIVYLENHI
VSAQNLLKLISNFSKVSGYKINVQKSQAFLHTNNRQTETQIMSELPFTIASKRIKYLGIQ
LTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCPWVGRINIVKMAILPKVIYRFNAIPIKL
PMTFFTELEKTTLKFIWNQKRACIAKSIVSQNNKAGGITLRDFKLYYKATVTKTAWYWYQ
NRDIHQWNRTEPSEIMLHIYNHLIFDKPDKNKQWGKDSLFNKWCWENWLAICRKLKLDPF
LTPYTKINSRWIKDLNVRPKTIKSLEENLGNTIQDMGMGKDFMSETPKAMATKAKIDKWD
LMKLKSFCTAEETTIRVNRQPTE

>gi568815594r:45940991_46223913|GENSCAN_predicted_CDS_8|1152_bp
atgctccctccaaaccttctaggagagaatctttctgtgcctctttcagcttccatgtta
gaagttctggctggggcaatcaggcaggagaaggaaataaaggatattcaattaggaaaa
gaggaagtcaaattatccctgtatgcatatgacatgattgtatatctagaaaaccacatc
gtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaa
atcaatgtgcaaaaatcacaagcattcttacacaccaataacagacaaacagagacccaa
atcatgagtgaactcccattcacaattgcttcgaagagaataaaatacctaggaatccaa
cttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaata
aaagaggatacaaacaaatggaagaacattccatgcccatgggtaggaagaatcaatatc
gtgaaaatggccatactgcccaaggtaatttatagattcaatgccattcccatcaagcta
ccaatgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaa
agagcctgcattgccaagtcaattgtaagccaaaataacaaagctggaggcatcacgcta
cgtgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaa
aacagagatatacatcaatggaacagaacagagccctcagaaataatgctgcatatctac
aaccatctgatctttgacaaacctgacaaaaacaagcaatggggaaaggattccctattt
aataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaattaattcaagatggattaaagacttaaatgttagacctaaa
accataaaatccctagaagaaaacctaggcaataccattcaggacatgggcatgggcaag
gacttcatgtctgaaacaccaaaagcaatggcaacaaaggccaaaattgacaaatgggat
ctaatgaaactaaagagcttctgtacagcagaagaaactaccatcagagtgaacaggcaa
cctacagaatag