Result of FASTA (ccds) for pF1KB9983
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9983, 570 aa
  1>>>pF1KB9983 570 - 570 aa - 570 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 10.1113+/-0.00137; mu= -4.0385+/- 0.080
 mean_var=342.3622+/-80.992, 0's: 0 Z-trim(109.7): 808  B-trim: 475 in 1/51
 Lambda= 0.069316
 statistics sampled from 10083 (11064) to 10083 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.34), width:  16
 Scan time:  3.590

The best scores are:                                      opt bits E(32554)
CCDS73414.1 ZBTB44 gene_id:29068|Hs108|chr11       ( 570) 3810 395.7 8.1e-110
CCDS44776.1 ZBTB44 gene_id:29068|Hs108|chr11       ( 453) 2991 313.7 3.1e-85
CCDS73415.1 ZBTB44 gene_id:29068|Hs108|chr11       ( 474) 2991 313.7 3.2e-85


>>CCDS73414.1 ZBTB44 gene_id:29068|Hs108|chr11            (570 aa)
 initn: 3810 init1: 3810 opt: 3810  Z-score: 2085.0  bits: 395.7 E(32554): 8.1e-110
Smith-Waterman score: 3810; 99.8% identity (100.0% similar) in 570 aa overlap (1-570:1-570)

               10        20        30        40        50        60
pF1KB9 MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 VGQAEDENKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VGQAEDENKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SEFMKSSILWNTPNSQPEKGLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SEFMKSSILWNTPNSQPEKGLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRES
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 RRKRKSYIVMSPESPVKCGTQTSSPQVLNSSASYSENRNQPVDSSLAFPWTFPFGIDRRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RRKRKSYIVMSPESPVKCGTQTSSPQVLNSSASYSENRNQPVDSSLAFPWTFPFGIDRRI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 QPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLPLGTEEDVRVKVERLSDEEVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLPLGTEEDVRVKVERLSDEEVH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 EEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGLPTLQSTSSTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGLPTLQSTSSTN
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 APPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 APPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHI
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 IRKPRIYECKTCGAMLTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEQEETLV
       :::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
CCDS73 IRKPRIYECKTCGAMFTNSGNLIVHLRSLNHEASELANYFQSSDFLVPDYLNQEQEETLV
              490       500       510       520       530       540

              550       560       570
pF1KB9 QYDLGEHGFESNSSVQMPVISQYHSKGKEP
       ::::::::::::::::::::::::::::::
CCDS73 QYDLGEHGFESNSSVQMPVISQYHSKGKEP
              550       560       570

>>CCDS44776.1 ZBTB44 gene_id:29068|Hs108|chr11            (453 aa)
 initn: 2991 init1: 2991 opt: 2991  Z-score: 1643.7  bits: 313.7 E(32554): 3.1e-85
Smith-Waterman score: 2991; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450)

               10        20        30        40        50        60
pF1KB9 MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 VGQAEDENKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VGQAEDENKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SEFMKSSILWNTPNSQPEKGLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SEFMKSSILWNTPNSQPEKGLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRES
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 RRKRKSYIVMSPESPVKCGTQTSSPQVLNSSASYSENRNQPVDSSLAFPWTFPFGIDRRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RRKRKSYIVMSPESPVKCGTQTSSPQVLNSSASYSENRNQPVDSSLAFPWTFPFGIDRRI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 QPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLPLGTEEDVRVKVERLSDEEVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLPLGTEEDVRVKVERLSDEEVH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 EEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGLPTLQSTSSTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGLPTLQSTSSTN
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 APPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 APPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHI
       ::::::::::::::::::::::::::::::                              
CCDS44 HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEVIS                           
              430       440       450                              

>>CCDS73415.1 ZBTB44 gene_id:29068|Hs108|chr11            (474 aa)
 initn: 2991 init1: 2991 opt: 2991  Z-score: 1643.4  bits: 313.7 E(32554): 3.2e-85
Smith-Waterman score: 2991; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450)

               10        20        30        40        50        60
pF1KB9 MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 MGVKTFTHSSSSHSQEMLGKLNMLRNDGHFCDITIRVQDKIFRAHKVVLAACSDFFRTKL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 VGQAEDENKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 VGQAEDENKNVLDLHHVTVTGFIPLLEYAYTATLSINTENIIDVLAAASYMQMFSVASTC
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 SEFMKSSILWNTPNSQPEKGLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 SEFMKSSILWNTPNSQPEKGLDAGQENNSNCNFTSRDGSISPVSSECSVVERTIPVCRES
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 RRKRKSYIVMSPESPVKCGTQTSSPQVLNSSASYSENRNQPVDSSLAFPWTFPFGIDRRI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 RRKRKSYIVMSPESPVKCGTQTSSPQVLNSSASYSENRNQPVDSSLAFPWTFPFGIDRRI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 QPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLPLGTEEDVRVKVERLSDEEVH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 QPEKVKQAENTRTLELPGPSETGRRMADYVTCESTKTTLPLGTEEDVRVKVERLSDEEVH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 EEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGLPTLQSTSSTN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 EEVSQPVSASQSSLSDQQTVPGSEQVQEDLLISPQSSSIGSVDEGVSEGLPTLQSTSSTN
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 APPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS73 APPDDDDRLENVQYPYQLYIAPSTSSTERPSPNGPDRPFQCPTCGVRFTRIQNLKQHMLI
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEGKRCFRCQICSATFTSFGEYKHHMRVSRHI
       ::::::::::::::::::::::::::::::                              
CCDS73 HSGIKPFQCDRCGKKFTRAYSLKMHRLKHEVPLQRQGTMIDNSQAVDEMTRNGE      
              430       440       450       460       470          




570 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 08:06:06 2016 done: Sat Nov  5 08:06:07 2016
 Total Scan time:  3.590 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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