GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:21:02

Sequence gi568815590r:118824377_119033301 : 208925 bp : 37.60% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  12453  12615  163  2  1   72   81   110 0.728   8.64
 1.02 Term +  14579  14784  206  0  2   51   42    98 0.262  -1.95
 1.03 PlyA +  15083  15088    6                               1.05

 2.00 Prom +  16229  16268   40                              -4.55
 2.01 Init +  16283  16466  184  1  1   86   28   126 0.064   5.73
 2.02 Intr +  22036  22252  217  2  1   73   37    89 0.062  -1.06
 2.03 Intr +  23684  23829  146  2  2   16   64   147 0.162   4.11
 2.04 Intr +  33840  33897   58  1  1   88   97    63 0.043   4.22
 2.05 Intr +  49351  49601  251  1  2   50   81   132 0.020   4.86
 2.06 Term +  50934  51001   68  1  2   84   39   103 0.929   2.12
 2.07 PlyA +  51101  51106    6                               1.05

 3.09 PlyA -  52542  52537    6                               1.05
 3.08 Term -  57271  57128  144  1  0   46   36    94 0.076  -3.07
 3.07 Intr -  68872  68687  186  1  0   73   91   134 0.953  11.16
 3.06 Intr -  75134  75049   86  0  2   63   92    -8 0.027  -4.28
 3.05 Intr -  81184  81017  168  2  0    6   92   114 0.025   2.60
 3.04 Intr - 100386 100036  351  1  0   76   59   263 0.492  16.57
 3.03 Intr - 102342 102118  225  1  0   61   86   143 0.989   8.43
 3.02 Intr - 108924 108555  370  0  1  112   92   252 0.971  21.75
 3.01 Init - 115833 115792   42  0  0   14   70    69 0.220  -3.76
 3.00 Prom - 117315 117276   40                              -4.65

 4.00 Prom + 118219 118258   40                              -5.35
 4.01 Init + 122868 123073  206  2  2   54   26   232 0.453  11.97
 4.02 Intr + 127623 127710   88  0  1  109   59    59 0.083   4.15
 4.03 Term + 128230 128361  132  0  0   33   43   109 0.064  -1.99
 4.04 PlyA + 128873 128878    6                               1.05

 5.07 PlyA - 129505 129500    6                              -0.45
 5.06 Term - 129768 129718   51  0  0  109   42    57 0.029  -0.35
 5.05 Intr - 134201 134106   96  2  0   61  108    65 0.063   5.09
 5.04 Intr - 134941 134855   87  1  0  101   28    74 0.052   1.95
 5.03 Intr - 155631 155519  113  1  2   77   84   146 0.186  12.28
 5.02 Intr - 167371 167219  153  2  0   90  101    17 0.050   2.32
 5.01 Init - 182363 182156  208  2  1   60   87    81 0.216   4.23
 5.00 Prom - 192138 192099   40                              -3.05

 6.03 PlyA - 195945 195940    6                               1.05
 6.02 Term - 197150 196981  170  0  2   91   54    72 0.420   1.16
 6.01 Intr - 200980 200912   69  2  0   71  115    21 0.327   1.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  49355  49601  247  1  1   85   81   125 0.954   9.30


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_1|122_aa
MEEFEPIPAQNLSSGCTALHLHQPAVESPEKPGKTTKKCTYRAFQRAEDKRGREDPISKY
SYIVGIQVISGRHNLTNNILPLLMSILSESVTKAYVVIVCGGGSGSIKKELERLEMKGGE
EK

>gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_1|369_bp
atggaggaatttgaacccatacctgcccaaaacctaagttcaggctgtacagctctccac
ctgcatcaacctgcggtagaaagtccagagaagcctggcaaaacaactaaaaaatgcacc
tatcgagcatttcaaagagcagaagataagagaggcagagaagatcctatctccaaatac
agttacattgtaggcattcaggttatttcggggagacacaatttaaccaataatatcctc
cctttgctaatgagcatcctttctgaatcagttactaaggcttatgtggtgattgtgtgt
ggaggcggaagtgggagtataaagaaagagctggagagactagagatgaagggaggagag
gagaaatga

>gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_2|307_aa
MMSRDVKESHVKSMERGPGTDPPGTSYIVAGERDREWGLCVPTHISYQIVIPTCCGKDLV
VGFGQMPASISCCGPFHREAHIRTVGSVRTSEEKIEERKTETETRQPASLFVTSLGSDIT
SCCPYFICEKPSLSVFDEVAAIEVAVETVHGPQSQNYLLSDPLRKMFAKPENLSQNETAS
LGRGFEQKGEGGMTENMSWFHSKMDVTGGHYPKWINTETESQIPHALTFKWELNIGTHGH
KNDNNRHGTARGEGEEQALKKITIEYYAHSLGDRINRTTNLSTYPAYSTYKDDEDEDLYD
NPPTLNA

>gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_2|924_bp
atgatgtcaagagatgtaaaagagagccatgtaaaatccatggagagaggacctgggaca
gatcctccaggcacatcttacatagtggcaggagagagagaccgagagtgggggctctgt
gtccctactcacatctcataccaaattgtgatccccacatgttgtgggaaggatctggtg
gtaggttttggccagatgccggcctcaatttcatgctgtggacctttccacagggaagct
cacatcaggacagttggctccgtcagaacaagtgaggaaaaaatagaagagagaaagaca
gagacagagacaagacagccagcaagtctttttgtaaccagtcttggaagtgacatcacg
tcatgttgtccctattttatttgtgaaaagccatcactaagtgtttttgatgaagtagca
gcaatagaagttgcagtggagactgtccatggcccacaaagtcaaaactatttgctatct
gaccctttacgaaaaatgtttgccaaacctgaaaatctttctcaaaatgagacggcatcc
ttggggagaggttttgagcaaaaaggagaaggaggaatgactgagaacatgagctggttt
catagcaagatggatgtaactggaggccattatcctaagtggattaacacagaaacagaa
agccaaataccacatgctctcacttttaaatgggagctaaacatcggtactcatggacat
aaaaatgacaacaatagacatggcactgctagaggggagggagaggagcaagcattgaaa
aaaataactattgagtactatgctcactccctgggtgacaggatcaatcgtaccacaaat
ctcagcacatacccagcctactcaacttataaagatgatgaggatgaagacctttatgat
aatccacctacacttaatgcatag

>gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_3|523_aa
MLSLPAPPTPRQALFLDISIKWTTQETFPPKYLHYDEETSHQLLCDKCPPGTYLKQHCTA
KWKTVCAPCPDHYYTDSWHTSDECLYCSPVCKELQYVKQECNRTHNRVCECKEGRYLEIE
FCLKHRSCPPGFGVVQADVTLCEEAFFRFAVPTKFTPNWLSVLVDNLPGTKVNAESVERI
KRQHSSQEQTFQLLKLWKHQNKDQDIVKKIIQDIDLCENSVQRHIGHANLTFEQLRSLME
SLPGKKVGAEDIEKTIKACKPSDQILKLLSLWRIKNGDQDTLKGLMHALKHSKTYHFPKT
VTQSLKKTIRFLHSFTMYKLYQKLFLEMIADPKYCSSKYFSVAAQVVLEAALKKDEAERL
GYSLNNSREEIPCSSWVAPRSQCKKRCAPDRFLKGRDILFSTLISNLRPAACHIVHPLGV
PALSRWGHQGSSSRRAHDFLHHETVTKSLASHRLGKSSFKCRTHSHGFPFPSAPYQLLAK
ALRNSDGFLPAQIKKFAIYKTVVFLSRESHLRTSPELNLSVIK

>gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_3|1572_bp
atgctatccctccctgctccccccaccccacgacaggccctgtttctggacatctccatt
aagtggaccacccaggaaacgtttcctccaaagtaccttcattatgacgaagaaacctct
catcagctgttgtgtgacaaatgtcctcctggtacctacctaaaacaacactgtacagca
aagtggaagaccgtgtgcgccccttgccctgaccactactacacagacagctggcacacc
agtgacgagtgtctatactgcagccccgtgtgcaaggagctgcagtacgtcaagcaggag
tgcaatcgcacccacaaccgcgtgtgcgaatgcaaggaagggcgctaccttgagatagag
ttctgcttgaaacataggagctgccctcctggatttggagtggtgcaagctgatgttacc
ctgtgtgaggaggcattcttcaggtttgctgttcctacaaagtttacgcctaactggctt
agtgtcttggtagacaatttgcctggcaccaaagtaaacgcagagagtgtagagaggata
aaacggcaacacagctcacaagaacagactttccagctgctgaagttatggaaacatcaa
aacaaagaccaagatatagtcaagaagatcatccaagatattgacctctgtgaaaacagc
gtgcagcggcacattggacatgctaacctcaccttcgagcagcttcgtagcttgatggaa
agcttaccgggaaagaaagtgggagcagaagacattgaaaaaacaataaaggcatgcaaa
cccagtgaccagatcctgaagctgctcagtttgtggcgaataaaaaatggcgaccaagac
accttgaagggcctaatgcacgcactaaagcactcaaagacgtaccactttcccaaaact
gtcactcagagtctaaagaagaccatcaggttccttcacagcttcacaatgtacaaattg
tatcagaagttatttttagaaatgatagctgatccaaaatactgcagcagcaaatacttt
tctgtggctgctcaggtagtgttagaggcggcattaaaaaaagatgaagctgaacgtttg
ggctattccttaaacaactccagagaggaaattccttgctcatcctgggtagcacccagg
tcacaatgcaagaaacggtgtgccccagatagattcctcaaaggcagggatattctcttc
agtactctaatctcaaaccttagaccagctgcctgccacatagttcatccccttggagta
ccagccttaagtcggtggggtcaccagggctcttcttctcggagggcccatgacttcctc
caccatgaaactgtcacaaaatccttagcatctcatcgcttaggcaaaagcagcttcaaa
tgccggactcatagtcatggatttccattcccctctgctccctaccagcttttagcaaag
gcactgcgaaattcagatggctttctgccagcgcaaataaagaagtttgctatttataaa
actgttgtgttcttgagcagggaaagccatctgagaacatctccagaattaaatttgtct
gtaattaaataa

>gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_4|141_aa
MEIASGSKLNSVGTSMEIASRRSNTLANLFIAPLTQETHLIVMHYGDLGATNEQDENLRL
QRAHTLPQRKLGRERSGGVQKAPGLTLSGLGRKGSPRELEPERICRVKIGLPGAGITLRS
TVPFTNPTIIKGLLVSELPTR

>gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_4|426_bp
atggaaattgccagtggcagtaagctaaattctgttggaacatccatggaaattgccagt
agacgatccaacaccctagcaaatctctttatagctcctttaactcaggaaacacacctt
attgtcatgcattatggagatcttggggctacaaatgaacaagatgaaaatctgcgcttg
caaagagcccatactttgccacagaggaagcttgggcgggagcggtcggggggtgtgcag
aaagctccagggttaacgctttcagggctggggcggaaaggatcccccagggagttagag
ccagagagaatctgcagagtgaaaattggactgcctggggcagggataaccttgcggagc
actgttcccttcaccaaccccaccatcatcaaagggctattggtatcggagcttcctacg
cgctga

>gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_5|235_aa
MGKDDDRQYPCSRNIQGISGWRHLGQMKILGKDPDRAQDPERTWHLQRPILITPTAIGTI
PCVSPFVKCSILATQTQDTELGHTRKSRSRRYSCLCLPRVYVQVEKQKIRVRKVFKTMYY
DYSHRGSKLPSSEQPYERQETETISPTTHEEQKSANTHSTKAPNDLTTFATELPDLHPML
SKPYLTLKTHSVHEFESFSREAFSCRGGIPAIHLQELEQGEPEFELKASANTIEK

>gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_5|708_bp
atgggtaaagatgatgataggcaatatccatgcagtaggaatatccagggaatatctgga
tggaggcatttgggacagatgaaaatcctgggcaaagatccagacagggcccaggatcca
gaaagaacatggcatttacagagaccaatattaattacaccaacagctattgggaccata
ccatgtgtcagcccctttgttaagtgctcaatattagccacacagactcaggatactgaa
ttgggccacacaagaaaatccagaagtagaagatacagttgcctctgtcttcccagagtt
tatgttcaagtggaaaagcaaaagataagggtacgaaaagttttcaaaacaatgtattat
gattactcacaccggggaagcaagctgccaagttctgagcagccttatgaaagacaagaa
actgagaccatcagtccaacaacccatgaggaacagaagtctgccaacactcattctaca
aaggccccaaatgacttgaccacatttgctactgaacttccagatcttcatcctatgctc
tctaagccttatctgacactgaagacccatagtgttcatgaatttgaaagcttcagccgt
gaggctttttcttgccgaggaggcattcctgccatacacttacaggagttagaacaagga
gagccagaatttgagctaaaagcttcagcgaataccatagaaaaataa

>gi568815590r:118824377_119033301|GENSCAN_predicted_peptide_6|79_aa
XECSTKRYVIEAIAAKALKNNLCESLWPLPAPAVVIPASSYCTDCRGHAFSAPKLHETVP
VLGIIVAVVHLQGVKFYDE

>gi568815590r:118824377_119033301|GENSCAN_predicted_CDS_6|240_bp
ncagagtgcagtaccaagcgttatgtaatagaggcaatagcagctaaggctttaaaaaat
aatctctgcgaaagcctttggcctctaccagctccagcagtagtaattcctgccagctcc
tactgcactgattgtagaggacatgcattctctgctcctaaactgcatgagacagtccct
gtcttgggcataattgttgctgtagttcatctgcagggagtcaagttctatgatgaatga