GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:18:09

Sequence gi568815591f:24185241_24389580 : 204340 bp : 40.07% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  22986  23067   82  2  1   50   72    60 0.652   1.78
 1.02 Intr +  28124  28311  188  0  2   82   70   144 0.550  10.49
 1.03 Term +  33248  33373  126  1  0   63   45   116 0.494   2.10
 1.04 PlyA +  34947  34952    6                               1.05

 2.00 Prom +  37116  37155   40                              -4.25
 2.01 Init +  39733  39749   17  0  2   92   92    -5 0.180  -0.05
 2.02 Term +  42525  43113  589  0  1   93   33   224 0.825  10.40
 2.03 PlyA +  43297  43302    6                               1.05

 3.00 Prom +  45194  45233   40                              -5.05
 3.01 Init +  46886  46888    3  1  0   63  115     0 0.177   0.25
 3.02 Intr +  65091  65206  116  2  2   55   86   113 0.309   6.13
 3.03 Intr +  72215  72350  136  2  1   71   82    21 0.120  -0.55
 3.04 Term +  74277  74360   84  2  0   87   52    88 0.570   1.77
 3.05 PlyA +  74728  74733    6                               1.05

 4.03 PlyA -  76533  76528    6                               1.05
 4.02 Term -  77197  77175   23  2  2  112   43    33 0.328  -1.30
 4.01 Init -  82799  82730   70  2  1   60  100    56 0.405   5.26
 4.00 Prom -  88222  88183   40                              -2.95

 5.05 PlyA -  88986  88981    6                               1.05
 5.04 Term -  90218  89841  378  2  0  -51   42   260 0.345   1.30
 5.03 Intr -  91200  90320  881  1  2   16   41   446 0.115  22.81
 5.02 Intr -  92804  92561  244  2  1   94  -16   200 0.155   6.35
 5.01 Init -  93659  93549  111  2  0   87   31    47 0.519  -0.84
 5.00 Prom -  95012  94973   40                              -5.45

 6.00 Prom +  98916  98955   40                              -4.55
 6.01 Init +  99138  99386  249  2  0   46   62   254 0.586  14.16
 6.02 Intr + 100001 100188  188  1  2   81   90   238 0.904  20.87
 6.03 Intr + 104259 104410  152  0  2   82   51   149 0.085   9.49
 6.04 Intr + 119871 120058  188  1  2   63   80    81 0.005   3.29
 6.05 Intr + 133099 133216  118  0  1   75   88    -1 0.026  -2.28
 6.06 Term + 134060 134214  155  0  2   56   54   175 0.678   8.00
 6.07 PlyA + 134812 134817    6                               1.05

 7.00 Prom + 147126 147165   40                              -5.75
 7.01 Init + 147593 147805  213  1  0   76   55    97 0.560   3.99
 7.02 Term + 152138 152263  126  1  0   99   47   112 0.934   5.50
 7.03 PlyA + 153400 153405    6                               1.05

 8.00 Prom + 154344 154383   40                              -7.55
 8.01 Init + 156562 156602   41  0  2   81  101    53 0.962   3.73
 8.02 Intr + 158642 158827  186  2  0   80   26   159 0.011   6.78
 8.03 Intr + 165606 165719  114  0  0    2   60   140 0.004   1.24
 8.04 Intr + 167438 167571  134  2  2   49   39    75 0.003  -1.93
 8.05 Intr + 167839 168082  244  2  1  -12  113   183 0.076   6.43
 8.06 Intr + 176125 176180   56  1  2   59   39    49 0.007  -5.20
 8.07 Intr + 177000 177101  102  1  0   76   68    76 0.189   3.63
 8.08 Intr + 182587 182766  180  2  0   48   96    93 0.311   5.02
 8.09 Intr + 188018 188133  116  0  2  -62   94   159 0.243   0.75
 8.10 Intr + 191460 191511   52  2  1   96  119     2 0.517   1.66
 8.11 Term + 193535 193659  125  0  2   42   49   210 0.684  10.07
 8.12 PlyA + 193753 193758    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 104259 104417  159  0  0   82   48   151 0.829   8.68
S.002 Term + 158642 158831  190  2  1   80   42   160 0.910   6.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_1|131_aa
MPIFKPTKVKETGTIRDGLRPVKNLPLAGSEPTSGIYSKEQLTNNCCQVSECTHMILEVA
VSSSCDEVVSSELLLTHAVGPGMKRRKADLRPLLGGFGLSSNKHGYPVSQTTADAEETQG
GERGATRCWRL

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_1|396_bp
atgcccatatttaaaccaaccaaagtgaaggagactggaactatccgtgatgggcttaga
cctgtcaagaatcttcctctggctggctcagaacccacttctggaatctactctaaagag
caattgaccaacaactgctgccaagtttccgagtgcactcacatgattctggaagtggca
gtttcaagcagctgtgatgaggtggtgagcagtgagttgctcctcactcatgcagtgggc
cctggaatgaagaggaggaaagcagacctgcgccccttgcttggaggctttggactcagt
tctaacaagcacggttatccagtttcccagaccacggcagatgcagaggaaacccaagga
ggtgaaagaggtgccactcgctgctggaggctatga

>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_2|201_aa
MQWPARNGDGAQSPTASHWQARVSSEATQLCACLQPQTSSFLLTSALPALGQPLFLHVSP
LGLVMMPGEPMLLCCVVSFGINLPDSYKGLETLGYGPVGGGHWQDHGNIQRAGAYVSSSY
STTPNPENPPPVLTVALRLSPQPAALTPQALTSILTPPYSSQSKSFQEKLAFLVCSRTLL
KEAYLFTPTPKALMSYLTVII

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_2|606_bp
atgcagtggccagcgagaaatggagatggggctcagagtcccacagcctcccactggcag
gcccgagtatcatctgaagccacccagctctgtgcctgcctgcagccccagacctccagc
tttctactaacgtcagcattgcctgccctggggcaacccctgtttctccatgtgtctcct
ctgggtctggtcatgatgcctggggagccaatgctgctttgctgtgttgtatcatttggg
atcaacttgcctgactcttacaaaggacttgaaaccttggggtatggccctgttggggga
ggtcactggcaggaccacggtaatatccaaagggcaggggcctatgtcagctccagctac
tccaccaccccgaatccagaaaatcctcctcctgttcttaccgtggctctccggctgtct
ccccaacctgcagctctaactccccaggccctgacctctatcctaacccctccctactca
tcccaatccaaaagctttcaggagaagcttgcatttcttgtttgcagcaggacgctcctt
aaagaagcttacctttttacccctacccccaaagctttgatgagctatttaacagtaatt
atttaa

>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_3|112_aa
MKIQLATIQRPEQLFENPNARNKPETPMWSTELNGIKLEGPIMEQRYFEHRHGFFTLERG
SLPSCPEARWGDQEFKQTHSSSYLQVEKFQGVPMQSPSKATEEPRGDFQEGK

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_3|339_bp
atgaaaattcaactagcaactatccaaagaccagaacaactttttgaaaaccccaatgca
aggaacaagcctgagacaccaatgtggtccacagaactgaatggaattaaattagaaggt
cctattatggagcaaagatattttgaacacagacatggatttttcactttggaaagggga
tcccttccatcttgtcctgaggccagatggggggaccaagaatttaagcagacacattca
tcttcctatcttcaggtggagaaattccaaggtgttcccatgcagtctcccagcaaagcc
actgaggagccaagaggagacttccaagaggggaagtga

>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_4|30_aa
MGKKGAYWSAGWNDQEERKSGTEVKKQHAQ

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_4|93_bp
atggggaaaaagggagcatattggtctgctggatggaatgatcaggaagaaagaaaaagt
ggcactgaagtgaaaaagcagcatgctcaatag

>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_5|537_aa
MTDCTGKIGTLPPKYCAVPTVLANSTPGNYIPHMAQQDCSSSPAMEQSWTENDFDKLTEV
AFRKSVITNFSELKEDVRTHCKGAKNLENRLDEWLTKINSVGKPLNDLRKLKTMARELPP
HHTYSKIDHIVGSKALLSKCKRTEITTNCLSDHSAIKFELRIKKLTQKHTTTWKLNNLLL
NDYWVNNEMKAEIKMFFETNENKDKMYQNLWDTFKAVCRGKFIALNAHKRKQERSKIDIL
TSQLKELEKQEQTNSNASRRQEITKIRAELKEIKIQETLQKISESSSWFFEKISKIDRPL
ARLIKKKKEKNQIDTIKVDKGDITTDPTEIQTTIREYYKHLYANEVENLEEMDKFLDTYT
LPRLHQEEVKSLNRPITSSEMEVVINSLPTEKKSPGPDGFTVKFYQRYKEELRHNNNKKE
NFRPISLMNINEKILNRILANRIQQHIKKLIHYDQACFIPGMQGSFNIRKSIHIIHHINR
TNDKNHMIISIDAEKAFDKIQQDFMLKTLNKLGIDGTYLKIVRATYDKPTASIILNG

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_5|1614_bp
atgactgactgtaccgggaaaattgggacactgccacctaaatactgtgctgttcccacg
gttttagcaaacagcacaccaggaaattatatcccacacatggctcagcaggattgcagc
tcttcaccagcaatggaacaaagctggacagagaatgactttgacaagttgacagaagta
gccttcagaaagtcagtaataacaaacttctctgagctaaaggaggatgttcgaacccat
tgcaagggagctaaaaaccttgaaaacagattagatgaatggctaactaaaataaacagt
gtagggaagcccttaaatgacctgaggaagctgaaaaccatggcaagagaactaccacca
catcacacttattccaaaattgaccacatagttggaagtaaagcactcctcagcaaatgt
aaaagaacagaaattacaacaaactgtctctcagaccacagtgcaatcaaatttgaactc
aggattaagaaactcactcaaaagcacacaactacatggaaactaaacaacctgctcctg
aatgactactgggtaaataatgaaatgaaggcagaaataaagatgttctttgaaaccaat
gagaacaaagacaaaatgtaccagaatctctgggacacatttaaagcagtgtgtagaggg
aaattcatagcactaaatgcccacaagagaaagcaggaaagatctaaaatcgacatccta
acatcacaattaaaagaactagagaagcaagagcaaacaaattcaaatgctagcagaagg
caagaaataactaagatcagagcagaactgaaggagataaagatacaagaaactcttcaa
aaaatcagtgaatccagcagttggttttttgaaaagatcagcaaaattgatagaccatta
gcaagattaataaagaagaaaaaagagaagaatcaaatagacacaataaaagttgataaa
ggggatatcaccactgatcccacagaaatacaaactaccatcagagaatactataaacac
ctctacgcaaatgaagtagaaaatctagaagaaatggataaattcctggacacatacacc
ctcccaaggctacaccaggaagaagtcaaatccctaaatagaccaataacaagttctgaa
atggaggtagtaattaatagcttaccaaccgaaaaaaaaagcccaggaccagatggattc
acagtcaaattctaccagaggtacaaagaggagctgagacacaacaacaacaaaaaagag
aattttagaccaatatccctgatgaacatcaatgagaaaatcctcaatagaatactggca
aaccgaatccagcagcacatcaaaaagcttatccactatgatcaagcgtgcttcatccct
gggatgcaaggctcgttcaacatacgcaaatcaatacacattatccatcacataaacaga
accaatgacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaggacttcatgctaaaaactctcaataaactaggtattgatggaacgtatctcaaa
atagtaagagctacttatgacaaacccacagccagtatcatactgaatgggtaa

>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_6|349_aa
MIALHSPADYAGSAPRRGPALLAAKFHLFLCSPLIVHGPSPGPFPLGGSSELPFSRYGGR
TRDRYPKAAGGLPAGRRLEAQEAMLGNKRLGLSGLTLALSLLVCLGALAEAYPSKPDNPG
EDAPAEDMARYYSALRHYINLITRQRYGKRSSPETLISDLLMRESTENVPRTRYDKACDG
DIVAELKVPRGGKSETGNSEIFVSLVTPITLQSETLIQSSHFRGDETEDSKVKYLSKSRD
SNSILLTPRPVLYMINASQGSCSTSCDYLPAKHSKIQLAHILKRYSFSFLGLKEGGGRGQ
MITPKSGETENIAEVCLPGTEATGAIDWQEHASGHFDKLLEVASGVAGE

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_6|1050_bp
atgatcgcgctccactccccagcggactatgccggctccgcgccccgacgcggaccagcc
ctcttggcggctaaattccacttgttcctctgctcccctctgattgtccacggcccttct
cccgggcccttcccgctgggcggttcttctgagttaccttttagcagatatggagggaga
acccgggaccgctatcccaaggcagctggcggtctccctgcgggtcgccgccttgaggcc
caggaagcgatgctaggtaacaagcgactggggctgtccggactgaccctcgccctgtcc
ctgctcgtgtgcctgggtgcgctggccgaggcgtacccctccaagccggacaacccgggc
gaggacgcaccagcggaggacatggccagatactactcggcgctgcgacactacatcaac
ctcatcaccaggcagagatatggaaaacgatccagcccagagacactgatttcagacctc
ttgatgagagaaagcacagaaaatgttcccagaactcggtatgacaaggcttgtgatggg
gacattgttgcagagctcaaggtgcccaggggagggaagtcagagacaggtaattctgag
atttttgtgtcattggtcactccaatcaccttgcaaagtgaaacattaatccaatcttca
catttcagaggtgacgagactgaggacagcaaagttaagtacctgtccaagagcagggac
tcaaattcaattcttttgactccacgtccagtgctctacatgattaatgcttcacagggg
agttgttcaacaagttgtgactatcttccagcaaagcacagcaaaatccagcttgcccac
attttgaaaaggtacagctttagtttcctgggactgaaagagggagggggaagaggacaa
atgatcaccccaaaatctggagagacagagaatatagcagaggtctgcttacctggaaca
gaagcaactggagccatagactggcaagagcatgcaagtggtcactttgacaaattgttg
gaagttgccagtggagtagctggagagtga

>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_7|112_aa
MKAPLGDFEQKLEGSERGHHIDTKELSSQANRNSMCKGPGVGTHLACSRISKESTSVDTG
RAAMGRVVGDEESRMKAQTSTRMTVAGCHGNSEKALDSAFDFTVDHKPKHED

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_7|339_bp
atgaaggctccactgggtgactttgaacaaaaacttgaaggaagtgagagaggtcaccat
atagataccaaggagttgagcagtcaggcaaacagaaacagcatgtgcaaaggccctggg
gtgggaacacatctggcatgttcaaggattagcaaggagtccaccagtgttgacactggg
agagctgcaatggggagagtagtaggagatgaggagtctagaatgaaggcacaaacttcc
accaggatgactgtggctggttgccatggaaatagcgagaaggcactggattcagcattt
gacttcactgtggatcacaagcccaagcatgaagactga

>gi568815591f:24185241_24389580|GENSCAN_predicted_peptide_8|449_aa
MAGEWELVCVAITCTTCRNATVKEFRQFLMSPSEVIKKKNPSERLSSQKGHIDCHKDSPC
PANRTEEGGREQCEEKEALGSAAAAVTSCNGGTRFLTRKPSPASVQLQMKHQKGAPGGRG
GCGQSFGILKHSCLLALKRTADLRAQCSSSAKGQTASSKRNSININKKDVHTKTPSEGHQ
HQRPKLDKSTKMRRSQRKKAENFKNQNASFPPKDHNSSPAKEQNWAENQFDELTEVGFRS
NWIKERDAVLTGSTAYFPGMELRHSGVLCEHLLMTRTSKDLYPTNTSTAVHTACWRWCRG
HGEEGKKEISVCLTDFRIGDTPKKQKVFHWKAQQTNWRRAATIATIGSDCSKGQTKHFSD
SWNTEPPAEKSSWPEATVLVLRPPGYKERSQGEPLYSPNSGIFLNHPSEPQAPLAEEKKR
RGEAAEHQRLRLDVKEQQLDLEGQLDGVA

>gi568815591f:24185241_24389580|GENSCAN_predicted_CDS_8|1350_bp
atggcaggagaatgggaactggtatgtgtggcgatcacatgtaccacttgcagaaatgcc
actgttaaagaatttcgacaatttttgatgagccccagtgaggtgataaagaaaaagaat
ccatctgagagactcagtagccaaaaagggcatattgattgtcacaaagacagcccatgc
ccagcaaatagaactgaagaaggagggcgagaacaatgcgaagaaaaagaggctctagga
tctgcagcagcagcagtgacatcctgcaatggaggcaccaggttcctcacccgcaaaccc
tcaccagccagtgtgcagctgcaaatgaagcatcagaagggagcacctgggggaaggggc
ggttgtgggcaaagcttcggcatacttaaacattcctgcctgctggctctgaagagaaca
gcagatctccgagcacagtgctcgagctctgctaagggacagacagcctcctcaaaaagg
aatagcatcaacatcaacaaaaaggacgtccacacaaaaaccccatccgaaggtcaccaa
catcaaagaccaaagctagataaatccactaagatgaggagaagccagcgcaaaaaggct
gaaaatttcaaaaaccagaatgcctcttttcctccaaaggatcacaactcctcgccagca
aaggaacaaaactgggcagagaatcagtttgatgaattgacagaagtaggcttcagaagt
aattggatcaaagaaagagatgctgtgttaacgggcagtacagcctattttccaggaatg
gagcttaggcacagtggagtcctttgtgagcacctgctaatgaccaggactagcaaggac
ctctacccaacaaacacatctacagctgtccacactgcgtgttggaggtggtgcagaggc
catggggaggagggaaagaaggaaatatcagtgtgtctgacagacttcagaataggagac
accccaaagaagcaaaaagtattccactggaaggcacagcagaccaactggagaagagca
gctacaattgctacaattgggagtgactgcagtaagggtcaaacgaagcacttttctgac
tcttggaacactgaaccgccagctgagaagtccagctggcctgaggccaccgtgctggta
ctcaggccaccaggctacaaggagaggtcgcagggagaaccattgtattcaccaaacagt
gggatcttcctaaaccatccttctgaaccccaggctccactggcagaggaaaagaagaga
agaggagaagcagcagaacatcagagactacggttggatgtcaaagagcagcagcttgat
ttagagggacagcttgatggcgttgcttag