GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:58:57

Sequence gi568815597f:225964352_226171476 : 207125 bp : 45.87% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -    887    882    6                              -0.45
 1.07 Term -   1433   1400   34  1  1  128   49    30 0.309   0.16
 1.06 Intr -   2302   2182  121  2  1   64  113    43 0.242   3.95
 1.05 Intr -   4485   4410   76  0  1   75  102   -25 0.121  -3.31
 1.04 Intr -   6695   6571  125  0  2   57  101   113 0.665   9.80
 1.03 Intr -   6871   6804   68  0  2   54  105    54 0.532   2.25
 1.02 Intr -  10236  10184   53  0  2   29   86    76 0.333  -0.79
 1.01 Init -  13893  13879   15  0  0   78   84    15 0.110  -1.02
 1.00 Prom -  15643  15604   40                              -6.56

 2.08 PlyA -  17621  17616    6                               1.05
 2.07 Term -  21172  20951  222  1  0  130   48   184 0.997  15.52
 2.06 Intr -  24037  23545  493  0  1   87   92   296 0.973  22.90
 2.05 Intr -  27012  26892  121  1  1   19  119    18 0.925  -2.45
 2.04 Intr -  28216  28047  170  0  2   98  100   291 0.915  30.89
 2.03 Intr -  28651  28540  112  2  1   51   57   132 0.192   5.84
 2.02 Intr -  31032  30915  118  0  1   31   75    29 0.122  -4.06
 2.01 Init -  34961  34842  120  2  0   96   94   118 0.365  13.47
 2.00 Prom -  51789  51750   40                              -4.06

 3.00 Prom +  73016  73055   40                              -2.76
 3.01 Init +  98263  98460  198  0  0   78   98   174 0.995  14.30
 3.02 Term +  98661  98786  126  2  0   93   46    51 0.985  -0.32
 3.03 PlyA +  99688  99693    6                               1.05

 4.00 Prom +  99844  99883   40                              -6.86
 4.01 Init + 100001 100128  128  1  2   79   67   106 0.987   7.23
 4.02 Intr + 101305 101458  154  1  1   47   98   203 0.983  17.27
 4.03 Term + 107000 107128  129  1  0  124   48   108 0.993   8.58
 4.04 PlyA + 107418 107423    6                               1.05

 5.00 Prom + 116885 116924   40                              -2.96
 5.01 Init + 127193 127252   60  1  0   79   87   -10 0.067  -0.75
 5.02 Intr + 137256 137317   62  2  2   77   52    82 0.345   1.03
 5.03 Term + 140558 140738  181  2  1  140   47   125 0.983  10.68
 5.04 PlyA + 142016 142021    6                               1.05

 6.00 Prom + 143166 143205   40                              -3.86
 6.01 Init + 145158 145172   15  2  0   28   91    15 0.579  -3.90
 6.02 Term + 146558 146731  174  1  0   56   44   275 0.826  17.66
 6.03 PlyA + 147696 147701    6                               1.05

 7.00 Prom + 147853 147892   40                              -7.96
 7.01 Init + 150553 150618   66  0  0   52   39   122 0.471   2.77
 7.02 Intr + 154639 154729   91  0  1   73   94    31 0.398   1.77
 7.03 Intr + 155389 155502  114  2  0   38   94    74 0.391   3.42
 7.04 Intr + 156108 156169   62  1  2   69   75    33 0.253  -1.45
 7.05 Intr + 160956 161015   60  2  0   75  100    72 0.728   6.03
 7.06 Intr + 164331 164516  186  2  0   78   73    27 0.264   0.09
 7.07 Intr + 169019 169103   85  1  1   72  110    10 0.548   0.99
 7.08 Term + 170768 170967  200  0  2   79   50   132 0.914   6.06
 7.09 PlyA + 173589 173594    6                               1.05

 8.08 PlyA - 176398 176393    6                               1.05
 8.07 Term - 182470 182259  212  2  2  109   42   207 0.999  15.66
 8.06 Intr - 188268 187984  285  1  0   50   70   290 0.746  20.71
 8.05 Intr - 190482 190296  187  0  1   95  100   194 0.999  20.56
 8.04 Intr - 195007 194833  175  0  1   60   96   252 0.998  23.14
 8.03 Intr - 197338 197180  159  0  0   85  106   199 0.999  20.50
 8.02 Intr - 201649 201508  142  2  1  115   77    80 0.998   9.01
 8.01 Intr - 203940 203910   31  0  1  106   95    13 0.744   1.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  90280  90414  135  0  0   33   48   125 0.802   1.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_1|163_aa
MAISLRYFTGCVSVVAQDDEAVRLWVRNWWVLGLTDFKNEATDPGGVKLQIFAVSVRALK
AAHLEFFVPPGGLMVSLASEVKLQTFAMLFIKVLIEPGTVVYACNPSILEAQVKRNVVGE
QGDNKEKVSNKHVSNRIYVIMKFKGRYYDWTCTNFTELVLLLL

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_1|492_bp
atggcgattagcctgcgctatttcacgggctgtgtttctgtggttgctcaggacgatgag
gctgtaaggttgtgggtccggaattggtgggttcttggtctcactgacttcaagaatgaa
gccacggaccctggaggagtgaagctgcagatcttcgcggtgagtgttagagctcttaag
gcagcgcatctggagttcttcgttcctcccggtgggctcatggtctcgctggcttcagaa
gtgaagctgcagaccttcgcgatgctgtttataaaagtactaatagaaccaggcacggtg
gtttatgcctgtaatcccagcattttggaagcccaagtaaaaaggaatgtagtaggagag
cagggtgataataaggagaaggtcagcaacaaacatgtgagcaatagaatctatgtcata
atgaagttcaagggaaggtactatgactggacgtgcaccaattttactgaactggtgctg
ctccttttgtag

>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_2|451_aa
MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSD
TVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE
WVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASS
KMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPS
TSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAE
LGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE
ERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQ
ERAARLFSVRGLAKEQIDPALFAKPLKGKKK

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_2|1356_bp
atggcggaggccgcggcgctggtgtggattcgcggccctggcttcgggtgcaaggcggtg
cggtgtgcctcgggtcggtgcaccgtccgggattttatccaccggcactgccaagatcag
aatgttccagtggaaaacttctttgtgaaatgcaatggagcactcattaacaccagtgac
acagtgcagcatggagctgtttatagtttggaacccagactttgcggtggaaaaggaggt
tttggatctatgctccgagcacttggtgctcagattgagaagacaaccaatcgagaagct
tgtcgggatctcagtggaaggagactacgcgatgtcaatcatgaaaaagcaatggctgaa
tgggtaaaacaacaagccgagcgagaggctgaaaaggagcagaagcggctggagcgactg
cagcggaagcttgtagaacccaagcactgcttcaccagccccgactaccagcagcagtgc
catgagatggctgagcgtctggaggattccgtcctcaaaggtatgcaggctgcctccagc
aagatggtttcagcagaaatcagtgagaatcggaaacggcaatggcctactaaatctcaa
acagacagaggagccagtgcgggaaagaggagatgcttctggttgggcatggagggacta
gagactgcagaagggtccaactctgagagttcagatgatgacagtgaagaagcaccaagc
acttcaggaatgggtttccatgctccaaaaattggtagcaatggtgtcgagatggcagcc
aaatttcccagtggttctcagagggcgagagtagtgaatacagaccatggatcaccagaa
caactgcagatcccggtgactgactctgggaggcatattttagaagactcatgtgctgag
ctgggggagtccaaagagcacatggaaagcaggatggttacagaaacagaagagacccag
gagaagaaggcagagagtaaagaacccatagaagaggagcccactggggctggactgaat
aaggataaagagacagaagaaaggactgatggggaaagagttgctgaggtagcacctgaa
gaaagggaaaacgttgccgttgccaaactgcaggaaagccagccaggaaacgcagttatt
gataaggaaactatagatttattggcgttcacctctgttgcagaactggagttgctgggt
ttggagaagctcaaatgtgaactgatggcccttggactgaaatgtgggggcactctgcag
gagcgggcagcaagactcttctctgtcagaggactggcaaaggagcaaattgacccggct
ttatttgccaagcctttgaaagggaagaaaaaatga

>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_3|107_aa
MGAGPSLPSIVCDWLARGAGAGRRVLGDSLGVSHLSIVFAAAAAPPSLSNASAASRSPSS
SRRRRGPNSSNRRGAEPALPPPPRAPGSSFFGEIPPAAPSPDPKPSP

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_3|324_bp
atgggggcggggccgagccttccctccattgtgtgtgattggctggcgcgcggcgcgggg
gcggggcggcgtgtgttgggggatagcctcggtgtcagccatctttcaattgtgttcgca
gccgccgccgcgccgccgtcgctctccaacgccagcgccgcctctcgctcgccgagctcc
agccgaaggagaagggggcccaacagcagcaaccgccgcggcgccgagcctgctctccct
cctcctccccgcgcccctggctcctctttcttcggtgaaatcccgcccgccgccccttcc
ccggaccccaaaccttcaccatga

>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_4|136_aa
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
MPKDIQLARRIRGERA

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_4|411_bp
atggctcgtacaaagcagactgcccgcaaatcgaccggtggtaaagcacccaggaagcaa
ctggctacaaaagccgctcgcaagagtgcgccctctactggaggggtgaagaaacctcat
cgttacaggcctggtactgtggcgctccgtgaaattagacgttatcagaagtccactgaa
cttctgattcgcaaacttcccttccagcgtctggtgcgagaaattgctcaggactttaaa
acagatctgcgcttccagagcgcagctatcggtgctttgcaggaggcaagtgaggcctat
ctggttggcctttttgaagacaccaacctgtgtgctatccatgccaaacgtgtaacaatt
atgccaaaagacatccagctagcacgccgcatacgtggagaacgtgcttaa

>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_5|100_aa
MPLIVKHTIILCTMRKGENASVEKLSSTKPEPAVKKVGDLCKTLLMSPFLRMSPFLLSPG
PIPIRLGPRCSSKTALASVTIAELGVHPLSSLLDLAATSI

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_5|303_bp
atgcccttgattgtaaaacataccatcattttatgtaccatgaggaaaggggaaaatgct
tctgtggaaaaactgtcttccacgaaaccagaacctgctgtcaaaaaggttggagacctc
tgcaaaactctgctgatgagtccattcctgcggatgagtccatttctgctctctcctgga
cctattcccatcaggcttggccctcgctgttcctccaaaactgctcttgccagcgtcacc
attgctgaacttggtgttcatcccttgtcctcattacttgatcttgcagcaacatccatc
tga

>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_6|62_aa
MDGFQPHSRRELQQKLAILKLGYPSPPPGKIVIISNLQKRKPELNSLLEVTVLLPNGGSP
DF

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_6|189_bp
atggatggcttccagccacacagccggagggagctgcagcagaaacttgccattttaaag
ctcggctacccctcaccaccacctggcaagattgtcatcatctccaatctacagaagcgg
aagccggagctaaatagcctgctagaggtcacggtgctgctgcccaacggcgggagcccg
gatttctga

>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_7|287_aa
MGRLAGRGADPPTSLPDGAAGRTGVLSDPQYSISQATGSRPLDITGQQGGAPGLSITLGE
ARAAGEGQLSNLNGNEEGTIKPALASASSAERCPTEFGNAVVERGWESPSQEGLRSPQTQ
MRPLDGAKASKIPAPTPAWNAHSAFITALNSTWFPKAMSPHTTSQGYNTLGFSDTVNTKQ
HELQDTQDSWRGAEPHETHTKDGPAFQGSLDPWFLSWKRGAGCQLLDSRARAGLHARLRQ
RLAPGAQVLQECVFNELLLNAAEPCSTLLPRPGVWEPDDSPAREGRT

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_7|864_bp
atggggcggctggccgggcggggggctgacccccccacctccctcccggacggggcggct
ggccggacaggagtcctcagtgaccctcaatattcaatcagccaagccacaggcagcagg
cccttggacatcactggacaacagggaggagccccaggcctgagcatcaccctaggggag
gccagggctgctggggaggggcagctttccaacctcaatgggaatgaagagggcaccatc
aaaccagcactggcttccgcctcttctgcagagagatgccctactgagtttggcaatgct
gtggttgagcgagggtgggagtccccaagccaggaagggctgcggtccccgcagacccag
atgcgtccactagatggcgccaaagccagtaagattccagcccccaccccagcctggaac
gcccacagtgcttttatcacagctcttaactccacttggttccccaaagctatgagccca
cataccacctcccagggctacaacactttgggtttctcagacactgtcaacactaagcag
catgaactgcaggacacacaggacagctggagaggggcagaaccgcatgagacacacacg
aaagacggccctgccttccagggctcgctagatccttggttcctgtcgtggaagagaggg
gcaggatgtcagttacttgacagcagggcccgtgctgggctccatgcccggcttcgccag
cgtctggcgccgggagcgcaggtgctccaagagtgtgtgttcaatgaattgttactgaat
gctgcagaaccctgctccacgctgcttcctcgccctggcgtttgggagcctgatgacagc
cctgcccgtgaaggccgcacctag

>gi568815597f:225964352_226171476|GENSCAN_predicted_peptide_8|396_aa
IPGVNQGLKIEKDGKAFHPTYEEKLKLVALHKQVLMGPYNPDTCPEVGFFDVLGNDRRKE
EEERRRREEEERERLQKEEEKRRREEEERLRREEEERRRIEEERLRLEQQKQQIMAALNS
QTAVQFQQYAAQQYPGNYEQQQILIRQLQEQHYQQYMQQLYQVQLAQQQAALQKQQEVVV
AGSSLPTSSKVNATVPSNMMSVNGQAKTHTDSSEKELEPEAAEEALENGPKESLPVIAAP
SMWTRPQIKDFKEKIQQDADSVITVGRGEVVTVRVPTHEEGSYLFWEFATDNYDIGFGVY
FEWTDSPNTAVSVHVSESSDDDEEEEENIGCEEKAKKNANKPLLDEIVPVYRRDCHEEVY
AGSHQYPGRGVYLLKFDNSYSLWRSKSVYYRVYYTR

>gi568815597f:225964352_226171476|GENSCAN_predicted_CDS_8|1191_bp
atacccggggttaatcaaggtctgaaaatagaaaaagatggcaaagcatttcatccaact
tatgaagaaaaattgaagcttgtggcactgcataagcaagttcttatgggcccatataat
ccagacacttgtcctgaggttggattctttgatgtgttggggaatgacaggaggaaggag
gaagaggagcgaaggcggcgtgaagaggaagaaagagaacgtctgcaaaaggaggaagag
aaacgtaggagagaagaagaggaaaggcttcgacgggaggaagaggaaaggagacggata
gaagaagaaaggcttcggttggagcagcaaaagcagcagataatggcagctttaaactcc
cagactgccgtgcagttccagcagtatgcagcccaacagtatccagggaactacgaacag
cagcaaattctcatccgccagttgcaggagcaacactatcagcagtacatgcagcagttg
tatcaagtccagcttgcacagcaacaggcagcattacagaaacaacaggaagtagtagtg
gctgggtcttccttgcctacatcatcaaaagtgaatgcaactgtaccaagtaatatgatg
tcagttaatggacaggccaaaacacacactgacagctccgaaaaagaactggaaccagaa
gctgcagaagaagccctggagaatggaccaaaagaatctcttccagtaatagcagctcca
tccatgtggacacgacctcagatcaaagacttcaaagagaagattcagcaggatgcagat
tccgtgattacagtgggccgaggagaagtggtcactgttcgagtacccacccatgaagaa
ggatcatatctcttttgggaatttgccacagacaattatgacattgggtttggggtgtat
tttgaatggacagactctccaaacactgctgtcagcgtgcatgtcagtgagtccagcgat
gacgacgaggaggaagaagaaaacatcggttgtgaagagaaagccaaaaagaatgccaac
aagcctttgctggatgagattgtgcctgtgtaccgacgggactgtcatgaggaggtgtat
gctggcagccatcaatatccagggagaggagtctatctcctcaagtttgacaactcctac
tctttgtggcggtcaaaatcagtctactacagagtctattatactagataa