GENSCAN 1.0	Date run:  5-Nov-116	Time: 17:59:00

Sequence gi568815596f:174619908_174820315 : 200408 bp : 43.25% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    206    201    6                               1.05
 1.05 Term -   5270   5142  129  2  0    1   48   156 0.526   1.08
 1.04 Intr -   6053   5914  140  0  2   77   66    75 0.354   4.38
 1.03 Intr -  13697  13609   89  1  2   78   71    27 0.044  -0.39
 1.02 Intr -  46889  46721  169  0  1   32   96   160 0.029  10.20
 1.01 Init -  63065  62867  199  2  1   55   91   151 0.865   9.17
 1.00 Prom -  63680  63641   40                              -5.06

 2.00 Prom +  79079  79118   40                              -3.66
 2.01 Init +  89778  89912  135  2  0   91   48   135 0.324   7.99
 2.02 Term +  95218  95292   75  0  0  129   49    37 0.537   1.74
 2.03 PlyA +  96304  96309    6                               1.05

 3.00 Prom +  96365  96404   40                              -2.96
 3.01 Init + 100001 100403  403  1  1   79   -4   397 0.011  26.39
 3.02 Intr + 106146 106229   84  1  0  123   62    30 0.417   3.69
 3.03 Intr + 109814 109917  104  0  2  115   79    71 0.363   8.79
 3.04 Intr + 110209 110398  190  0  1   28   -9   139 0.172  -2.64
 3.05 Term + 113325 113449  125  1  2   86   49    98 0.846   4.25
 3.06 PlyA + 115695 115700    6                               1.05

 4.03 PlyA - 116991 116986    6                               1.05
 4.02 Term - 118407 118397   11  1  2  114   43     1 0.212  -3.44
 4.01 Init - 124871 124703  169  2  1   64  100   101 0.511   8.60
 4.00 Prom - 126829 126790   40                              -2.16

 5.13 PlyA - 127714 127709    6                               1.05
 5.12 Term - 128348 128217  132  2  0   99   53   112 0.997   6.89
 5.11 Intr - 128912 128673  240  2  0   70   75   252 0.997  19.85
 5.10 Intr - 130262 130039  224  0  2  101  113   309 0.984  32.55
 5.09 Intr - 133833 133596  238  0  1   89   94   431 0.992  40.99
 5.08 Intr - 134507 134312  196  1  1   58   94   330 0.984  30.02
 5.07 Intr - 137768 137659  110  2  2   95   63    48 0.974   2.08
 5.06 Intr - 139468 139424   45  1  0  121   93    50 0.989   7.41
 5.05 Intr - 139726 139581  146  2  2   62   69   232 0.531  18.70
 5.04 Intr - 153072 152896  177  1  0   84   14   132 0.027   5.29
 5.03 Intr - 158353 158239  115  1  1   53   55    49 0.309  -1.88
 5.02 Intr - 159777 159571  207  0  0   11   57   154 0.180   3.87
 5.01 Init - 170699 170517  183  2  0   61   56    97 0.118   1.97
 5.00 Prom - 173280 173241   40                              -4.56

 6.07 PlyA - 176950 176945    6                               1.05
 6.06 Term - 180380 180209  172  1  1   62   32   174 0.758   6.50
 6.05 Intr - 180801 180738   64  1  1   96   59    48 0.758   0.48
 6.04 Intr - 189135 188998  138  1  0   42  100   104 0.982   7.44
 6.03 Intr - 191681 191604   78  0  0   50   87   115 0.930   7.12
 6.02 Intr - 192575 192402  174  0  0   92   83   127 0.458  12.51
 6.01 Intr - 196530 196473   58  0  1   90   55    61 0.190   1.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  46896  46721  176  0  2   52   96   164 0.941  12.42
S.002 Sngl + 100001 100411  411  1  0   79   48   405 0.971  31.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:174619908_174820315|GENSCAN_predicted_peptide_1|241_aa
MWRGGGGAAAPEGRAHISAKFPDGRSLPALSAFPARPAQPCGPREKFPRKNAQRGAGLRS
RPEPLRVLEAHPTTEHSVSASASFLQSQAPGHVQAIALNLDDAESGFQLSFLVVKECGGA
CGRPVCGKRKRLKSKLREGSSYIIGLLCSSRTEKEIPLALHIHKLCICGFSQLWIEICNF
KLSSFRKENPEFFWVGSKHETSTQPSVAQKPIDASRQQLSLAAPRKCLVTGRLPASRPKE
T

>gi568815596f:174619908_174820315|GENSCAN_predicted_CDS_1|726_bp
atgtggcggggcggcgggggggcggcggcgccggaggggagggcccacatctcggcgaag
ttcccggatggtcgcagcctcccggcgctgagcgcttttcctgcccgcccggctcagccc
tgcggaccccgggagaagtttcccagaaaaaatgcccagcgcggcgcggggctgcggagt
cgtccggagccgctgcgcgttttagaggcacatcccaccaccgagcattctgtgtcagca
tcagccagcttcctgcaaagccaggcccctgggcatgtgcaggctattgccttaaacctg
gatgatgcagaaagtggcttccagctctccttcttagtggtcaaggaatgtggaggggcc
tgtggcagacctgtatgtggaaaaagaaaacgtctcaaatccaagttaagagaaggaagt
tcctacattattggactgctgtgcagctctaggacagaaaaggagataccgctggccctc
catattcacaagctctgcatctgtgggttcagccaactatggatcgaaatatgcaacttc
aaattatcttcattcaggaaggagaaccctgagttcttctgggttggatctaagcatgaa
acttccactcaaccctcagttgcacagaagcccattgatgccagccggcagcagctgtcc
ctggctgctcccagaaagtgcctggtaactgggagactgccagccagccgccccaaggag
acctga

>gi568815596f:174619908_174820315|GENSCAN_predicted_peptide_2|69_aa
MAGCRSRALPCREAAKALREIEIERSAGGPGLLGDPGHPPQGLAQLELVPDLVSMTLGAP
GEESTWTES

>gi568815596f:174619908_174820315|GENSCAN_predicted_CDS_2|210_bp
atggcgggctgcaggtcccgagccctgccctgcagggaggcagctaaggccctgcgagaa
atcgaaatcgagcgcagcgctggtgggccagggctgctgggggacccagggcaccctccg
caggggctggcccagctagaactggtgcctgacttggtctccatgaccctgggggctcca
ggggaagagtcaacctggactgagtcttag

>gi568815596f:174619908_174820315|GENSCAN_predicted_peptide_3|301_aa
MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI
MPKDIQLARRIRGEPGKTLGNTFLSLIVLGSEAKRETLDGVTGGVFGGCSPFHSKHAWEA
TLPKAFGQSSVNTASQVWNRWALEGPDAGDGMQRFQVVTPAGRAWVRTATRAGASLLRRC
LRKPSQPGAESDEDFLRVQATSRENVYYSPDRTQHKHEPSRLFPQVLCLLVEAFLSLSQT
V

>gi568815596f:174619908_174820315|GENSCAN_predicted_CDS_3|906_bp
atggctcgtacaaagcagactgcccgcaaatcgaccggtggtaaagcacccaggaagcaa
ctggctacaaaagccgctcgcaagagtgcgccctctactggaggggtgaagaaacctcat
cgttacaggcctggtactgtggcgctccgtgaaattagacgttatcagaagtccactgaa
cttctgattcgcaaacttcccttccagcgtctggtgcgagaaattgctcaggactttaaa
acagatctgcgcttccagagcgcagctatcggtgctttgcaggaggcaagtgaggcctat
ctggttggcctttttgaagacaccaacctgtgtgctatccatgccaaacgtgtaacaatt
atgccaaaagacatccagctagcacgccgcatacgtggagaacctgggaaaacccttgga
aatacattcttgagccttattgtgttgggctcagaggctaagagggagaccctggatgga
gtgacaggtggtgtctttggtggctgttcacccttccacagtaaacatgcttgggaagca
actttgccaaaagccttcggacagtccagcgtcaacaccgcaagccaagtgtggaatcgg
tgggcactggaaggacccgacgcaggtgatgggatgcagcgcttccaggtggtgaccccg
gctggacgtgcgtgggtgcgaactgccacccgggctggggccagcttgctgcgccgctgc
ctccgcaagccctcccagcccggagctgagtctgacgaggatttcttacgcgttcaagcg
acctctcgtgaaaatgtctattactccccagaccgcactcagcacaagcacgaaccttcc
cgtttattcccacaagtgctgtgcctgctggtggaagcatttctctccctttctcagaca
gtttag

>gi568815596f:174619908_174820315|GENSCAN_predicted_peptide_4|59_aa
MSPWPHVFGYEVSSLVRVNAVWNIMMMDKASISPQMVVLAEALHAGKANPYTYVYSSTN

>gi568815596f:174619908_174820315|GENSCAN_predicted_CDS_4|180_bp
atgagcccatggccacatgtctttggctacgaagtgagttccctggtcagagtcaatgct
gtatggaatatcatgatgatggataaggcatctataagtccacagatggtagttttggca
gaagcattgcatgcaggaaaggcaaatccatatacttatgtctattccagcacaaactag

>gi568815596f:174619908_174820315|GENSCAN_predicted_peptide_5|670_aa
MRKLASLGLGPPKYQNRGLALISTSPAKLSLGSAGEGDYKDDGLPATPTGKTSDGIPVFS
MEGVVLSALRCLYLNELPQTKAQKDIINPEYLSLVASVEQETELDLGTCELALLHSQIAY
FPGNTSECDQWDSGEKPGFDKANSESINADHEHSKHNFWVMTLIFKKSKNMRSWPWKNSA
IKAFPALIKWLDPRAAVAKAWLRFVLTLRGPAATVHAYFCQGSTGSETGLVLGSEHETRL
VAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVDEVNQIVTTNVRLKQQWVDYNLKW
NPDDYGGVKKIHIPSEKIWRPDLVLYNNADGDFAIVKFTKVLLQYTGHITWTPPAIFKSY
CEIIVTHFPFDEQNCSMKLGTWTYDGSVVAINPESDQPDLSNFMESGEWVIKESRGWKHS
VTYSCCPDTPYLDITYHFVMQRLPLYFIVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSI
SVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFTMVFVIASIIITVIVINTHHRSPSTHV
MPNWVRKVFIDTIPNIMFFSTMKRPSREKQDKKIFTEDIDISDISGKPGPPPMGFHSPLI
KHPEVKSAIEGIKYIAETMKSDQESNNAAAEWKYVAMVMDHILLGVFMLVCIIGTLAVFA
GRLIELNQQG

>gi568815596f:174619908_174820315|GENSCAN_predicted_CDS_5|2013_bp
atgagaaagctggccagtctggggctggggcccccgaaatatcaaaatcgagggcttgct
ttgatatctacaagccctgcaaagctttccttggggtcagcaggggagggtgactacaag
gatgatggccttccggccactcccacaggaaagacctcagatgggatccccgtgttcagc
atggaaggggttgtcctgtcagcgctgaggtgtctctaccttaatgagctgccccagaca
aaggcacaaaaggacattatcaaccctgagtacctgtctttagtggcttctgttgaacag
gaaactgagctggatctgggcacatgcgagctggctttactgcactctcaaatcgcctac
ttccctgggaacacatctgagtgtgatcagtgggattctggagaaaagccgggctttgac
aaggcaaattcagagagcataaatgcagaccatgaacacagcaagcataacttttgggtg
atgacactgatctttaaaaaatcaaagaatatgagaagctggccatggaagaattctgcc
atcaaagcatttcctgcattgatcaagtggttggaccccagagctgccgtggccaaggcc
tggcttcggttcgtgttgactctgcgtggtcctgcagccacagtccacgcttacttctgc
caggggtccactgggtcagaaactggcctcgtcctgggctccgaacatgagacccgtctg
gtggcaaagctatttaaagactacagcagcgtggtgcggccagtggaagaccaccgccag
gtcgtggaggtcaccgtgggcctgcagctgatacagctcatcaatgtggatgaagtaaat
cagatcgtgacaaccaatgtgcgtctgaaacagcaatgggtggattacaacctaaaatgg
aatccagatgactatggcggtgtgaaaaaaattcacattccttcagaaaagatctggcgc
ccagaccttgttctctataacaatgcagatggtgactttgctattgtcaagttcaccaaa
gtgctcctgcagtacactggccacatcacgtggacacctccagccatctttaaaagctac
tgtgagatcatcgtcacccactttccctttgatgaacagaactgcagcatgaagctgggc
acctggacctacgacggctctgtcgtggccatcaacccggaaagcgaccagccagacctg
agcaacttcatggagagcggggagtgggtgatcaaggagtcccggggctggaagcactcc
gtgacctattcctgctgccccgacaccccctacctggacatcacctaccacttcgtcatg
cagcgcctgcccctctacttcatcgtcaacgtcatcatcccctgcctgctcttctccttc
ttaactggcctggtattctacctgcccacagactcaggggagaagatgactctgagcatc
tctgtcttactgtctttgactgtgttccttctggtcatcgtggagctgatcccctccacg
tccagtgctgtgcccttgattggaaaatacatgctgttcaccatggtgttcgtcattgcc
tccatcatcatcactgtcatcgtcatcaacacacaccaccgctcacccagcacccatgtc
atgcccaactgggtgcggaaggtttttatcgacactatcccaaatatcatgtttttctcc
acaatgaaaagaccatccagagaaaagcaagacaaaaagatttttacagaagacattgat
atctctgacatttctggaaagccagggcctccacccatgggcttccactctcccctgatc
aaacaccccgaggtgaaaagtgccatcgagggcatcaagtacatcgcagagaccatgaag
tcagaccaggagtctaacaatgcggcggcagagtggaagtacgttgcaatggtgatggac
cacatactcctcggagtcttcatgcttgtttgcatcatcggaaccctagccgtgtttgca
ggtcgactcattgaattaaatcagcaaggatga

>gi568815596f:174619908_174820315|GENSCAN_predicted_peptide_6|227_aa
VNRDPSATPSQWMLQQQSLDCGLNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAHT
TKRPMVVDMCIREIESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDINI
ITGALKLYFRDLPIPLITYDAYPKFIESANTYSTVYLQNYSIAKTARVKGGVTLHEKENL
MNAENLGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF

>gi568815596f:174619908_174820315|GENSCAN_predicted_CDS_6|684_bp
gtaaacagagacccttctgctacaccttctcagtggatgctgcagcagcagagtctagat
tgtggtttgaatgttcataagcagtgttccaagatggtcccaaatgactgtaagccagac
ttgaagcatgtcaaaaaggtgtacagctgtgaccttacgacgctcgtgaaagcacatacc
actaagcggccaatggtggtagacatgtgcatcagggagattgagtctagaggtcttaat
tctgaaggactataccgagtatcaggatttagtgacctaattgaagatgtcaagatggct
ttcgacagagatggtgagaaggcagatatttctgtgaacatgtatgaagatatcaacatt
atcactggtgcacttaaactgtacttcagggatttgccaattccactcattacatatgat
gcctaccctaagtttatagaatctgccaacacttactcaactgtctacttgcaaaactac
tccatagcaaagacagccagagtgaagggaggagtgaccctccacgaaaaggagaatctt
atgaatgcagagaaccttggaatcgtctttggacccacccttatgagatctccagaacta
gacgccatggctgcattgaatgatatacggtatcagagactggtggtggagctgcttatc
aaaaacgaagacattttattttaa