GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:12:44

Sequence gi568815597f:179202685_179453638 : 250954 bp : 40.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    361    356    6                               1.05
 1.04 Term -  26368  26217  152  2  2   99   36    75 0.664   0.49
 1.03 Intr -  26836  26557  280  1  1   -9  101   150 0.073   2.73
 1.02 Intr -  27001  26905   97  0  1   66   65   119 0.110   6.49
 1.01 Init -  32486  32419   68  2  2   60  116    36 0.125   4.27
 1.00 Prom -  34346  34307   40                              -6.05

 2.00 Prom +  40925  40964   40                              -4.55
 2.01 Init +  41339  41378   40  1  1   84   44    82 0.394   3.80
 2.02 Term +  53060  53304  245  0  2   13   42   255 0.369   8.48
 2.03 PlyA +  53468  53473    6                               1.05

 3.00 Prom +  56357  56396   40                              -7.35
 3.01 Init +  58415  58430   16  1  1   98   78    15 0.135   1.94
 3.02 Intr +  78475  78603  129  2  0   66   92    62 0.326   4.15
 3.03 Intr +  90689  90898  210  0  0   35   26   186 0.047   5.06
 3.04 Intr +  99993 100118  126  1  0   63   77   145 0.284  10.63
 3.05 Term + 120753 120832   80  1  2  111   43    58 0.122   0.55
 3.06 PlyA + 121148 121153    6                               1.05

 4.00 Prom + 129433 129472   40                              -3.85
 4.01 Init + 132148 132189   42  0  0  108   64    -7 0.931  -0.63
 4.02 Intr + 132822 132973  152  2  2   64  100   114 0.950   8.24
 4.03 Intr + 136754 136861  108  2  0   51  116    48 0.506   2.38
 4.04 Intr + 138344 138626  283  2  1  115  110   107 0.991  12.10
 4.05 Intr + 139430 139508   79  1  1   67   55    27 0.932  -4.49
 4.06 Intr + 140178 140259   82  1  1   84   95    62 0.951   4.28
 4.07 Intr + 140906 140951   46  2  1  121  111    24 0.796   5.49
 4.08 Intr + 142263 142392  130  2  1  102   92    44 0.663   5.55
 4.09 Intr + 144916 145013   98  2  2   77   62    17 0.566  -3.19
 4.10 Intr + 146160 146258   99  2  0  106  106    83 0.985  11.29
 4.11 Intr + 147612 147747  136  2  1   80  100   147 0.952  14.32
 4.12 Intr + 148633 148778  146  2  2   81   82   108 0.856   8.58
 4.13 Intr + 166184 166288  105  1  0   96   76    49 0.084   3.99
 4.14 Intr + 167291 167394  104  1  2  104   98    31 0.662   3.75
 4.15 Intr + 175953 176073  121  0  1   88   94    73 0.982   7.48
 4.16 Intr + 176713 176798   86  0  2   84   61    43 0.951  -1.10
 4.17 Intr + 180758 180860  103  2  1   81   86   105 0.994   8.86
 4.18 Intr + 182554 182675  122  0  2   93   92   106 0.997   9.87
 4.19 Intr + 191219 191359  141  2  0   36   98   166 0.953  10.95
 4.20 Term + 192414 192522  109  0  1   91   44   125 0.658   5.40
 4.21 PlyA + 193493 193498    6                              -0.45

 5.05 PlyA - 194175 194170    6                               1.05
 5.04 Term - 196006 195782  225  1  0   49   48   144 0.189   2.30
 5.03 Intr - 199708 199673   36  1  0   86   97    21 0.142   0.34
 5.02 Intr - 214322 214132  191  0  2   33   76   188 0.271  10.48
 5.01 Init - 215802 215703  100  0  1   52   -2   180 0.550   5.87
 5.00 Prom - 225193 225154   40                              -3.55

 6.08 PlyA - 225958 225953    6                               1.05
 6.07 Term - 234980 234945   36  2  0   87   54    84 0.525   1.26
 6.06 Intr - 237208 236912  297  1  0   60   39   190 0.552   7.45
 6.05 Intr - 238943 238806  138  2  0   -3   81   207 0.975  10.64
 6.04 Intr - 239517 239324  194  1  2   49  106   139 0.524  10.09
 6.03 Intr - 239787 239547  241  0  1   61  -29   147 0.211  -3.50
 6.02 Intr - 245362 244913  450  1  0   73   94   383 0.321  29.97
 6.01 Init - 246196 246059  138  1  0   75  123     1 0.384   2.49

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 166145 166288  144  1  0   53   76    83 0.828   3.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:179202685_179453638|GENSCAN_predicted_peptide_1|198_aa
MVRHAHSVIMYLLAQPVLLHEPSARWFKDGGGGGGGGGGGVGGAEPRQEEGKAESPLRAR
AWAGRERPEQRQEPEAGAEEECDQGSAGAREYARAGMGQQVGRVGEAPGLQQPQPRGIRG
SSAARPSGRRRDPAGRTTETGFNIFTQHAWLADPGGGEGKRSGFGDPGWSVLYSGTGLCG
CRKKVNGSFRRGKDEGQY

>gi568815597f:179202685_179453638|GENSCAN_predicted_CDS_1|597_bp
atggtcagacatgcacattcagtcatcatgtaccttctagcccagccagtgctgttacat
gaaccaagcgctcggtggtttaaagatggcggcggcggtggcggcggcggcggcggcggc
gttgggggcgcggagccgcgacaggaggagggaaaagcagaatctccactcagggccagg
gcctgggctgggagggagagaccggagcagcgccaggagcccgaggccggagccgaggag
gaatgtgaccaggggtcggcgggggcgcgggagtacgcgagagcagggatggggcagcag
gtgggccgcgtcggggaagctccggggctccagcagcctcagccccgcgggatccggggc
agcagtgcagccaggccctccggccgcaggcgggacccggcggggcgcaccacagagacc
ggcttcaatatcttcacccagcatgcctggctggcagatcccgggggcggagaaggaaag
agaagtgggtttggggaccctggatggtctgtcctctactctgggacgggactatgcggc
tgcagaaagaaagtgaatggcagcttcaggagagggaaggatgaagggcagtattag

>gi568815597f:179202685_179453638|GENSCAN_predicted_peptide_2|94_aa
MRTQQEDAIYEAKNALQTRALATQALRARNSNGVAMVYSMASGGGVLTDDKKAAGLEREL
MMAARKGLDPYSIIPPKAASVTGNPNLVPTITNK

>gi568815597f:179202685_179453638|GENSCAN_predicted_CDS_2|285_bp
atgaggacacaacaagaagatgccatctatgaagccaagaatgctttgcagaccagagcg
ctggccacacaggccctgagggcccgcaattccaatggagtggccatggtgtactccatg
gcatctggaggtggtgttcttactgatgacaagaaggcggctgggttggagagggagctc
atgatggctgcacggaagggactggacccatacagtataatacccccaaaggcagcttca
gtcacagggaaccctaatttggtccccaccatcaccaataagtga

>gi568815597f:179202685_179453638|GENSCAN_predicted_peptide_3|186_aa
MEYAHGELFVVVANEESCGNKRVLRRSWHLNYIYKSELDFSRQRCKSKVLRCSWMVSSNC
NDPQLQKRLLPVGLGAKRPCSSMLPRRVPFRACRELSQSRFGCTFYCWGGSVKQDVVADN
TMVGEEKMSLRNRLSKSRENPEEDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAE
ASNSLF

>gi568815597f:179202685_179453638|GENSCAN_predicted_CDS_3|561_bp
atggagtatgcacatggtgagctctttgttgtggtagctaatgaagaatcttgtggaaat
aaaagagttttgagaaggagttggcatttgaactacatctataaaagtgaattggatttc
agcaggcagagatgtaagagtaaagttctacgttgttcctggatggtcagttcaaactgc
aatgatccacagctccagaagcggcttcttccagtcggcctaggagccaaacgcccctgc
agctccatgctaccacgcagggtgccgtttcgggcttgcagggagttgtcgcagtcccgt
tttggctgcacattctactgctggggtggaagtgtcaagcaagatgttgtcgccgacaat
acaatggtgggtgaagagaagatgtctctaagaaaccggctgtcaaagtccagggaaaat
cctgaggaagatgaagaccagagaaaccctgcaaaggagtccctagagacacctagtaat
ggtcgaattgacataaaacagttgatagcaaagaagataaagttgacagcagaggcagag
gcaagtaactccctcttctag

>gi568815597f:179202685_179453638|GENSCAN_predicted_peptide_4|763_aa
MEKPCLYEKYKISQELKPFFMKEVGSHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKN
NHRANELLEVDHIRTIYHMFIALLILFILSTLVVDYIDEGRLVLEFSLLSYAFGKFPTVV
WTWWIMFLSTFSVPYFLFQHWATGYSKSSHPLIRSLFHGFLFMIFQIGVLGFGPTYVVLA
YTLPPASRFIIIFEQIRFVMKAHSFVRENVPRVLNSAKEKSSTVPIPTVNQYLYFLFAPT
LIYRDSYPRNPTVRWGYVAMKFAQVFGCFFYVYYIFERLCAPLFRNIKQEPFSARVLVLC
VFNSILPGVLILFLTFFAFLHCWLNAFAEMLRFGDRMFYKDWWNSTSYSNYYRTWNVVVH
DWLYYYAYKDFLWFFSKRFKSAAMLAVFAVSAVVHEYALAVCLSFFYPVLFVLFMFFGMA
FNFIVNDSRKKPIWNVLMWTSLFLGNGVLLCFYSQEWYARQHCPLKNNEFIPKEVLLSLT
YAANAGPCPENLLPPKKIKTPKGTLPRLVDHVWHHPVRRNKFKYLIDHPVSLTGAGRDIS
FLYDVTYAKGQTREKAVCPPHLARSLQSHDGVIVPHKPKTLTDTLIPEEFHIVSSTGVSG
LECYDEKPNKRVEVAQLNDVMDTMLERAGVENQEYTGPTKMHKLLHILKKEQTIYNMIFH
ELIRQVSVDCADRGELLSKVRERYVQMLDQIARQMIDFYKDLVTQRVMDQRILEELYNFK
HVIEELTRELCLVRAHDVKLTKETEKAHKDLAQALLNAEKNAK

>gi568815597f:179202685_179453638|GENSCAN_predicted_CDS_4|2292_bp
atggagaaaccctgtctctacgaaaaatacaaaattagccaggaattgaagccatttttt
atgaaggaagttggcagtcactttgatgattttgtgaccaatctcattgaaaagtcagca
tcattagataatggtgggtgcgctctcacaaccttttctgttcttgaaggagagaaaaac
aaccatagagcgaatgaactgcttgaagtggaccacatcagaacaatatatcacatgttt
attgccctcctcattctctttatcctcagcacacttgtagtagattacattgatgaagga
aggctggtgcttgagttcagcctcctgtcttatgcttttggcaaatttcctaccgttgtt
tggacctggtggatcatgttcctgtctacattttcagttccctattttctgtttcaacat
tgggccactggctatagcaagagttctcatccgctgatccgttctctcttccatggcttt
cttttcatgatcttccagattggagttctaggttttggaccaacatatgttgtgttagca
tatacactgccaccagcttcccggttcatcattatattcgagcagattcgttttgtaatg
aaggcccactcatttgtcagagagaacgtgcctcgggtactaaattcagctaaggagaaa
tcaagcactgttccaatacctacagtcaaccagtatttgtacttcttatttgctcctacc
cttatctaccgtgacagctatcccaggaatcccactgtaagatggggttatgtcgctatg
aagtttgcacaggtctttggttgctttttctatgtgtactacatctttgaaaggctttgt
gcccccttgtttcggaatatcaaacaggagcccttcagcgctcgtgttctggtcctatgt
gtatttaactccatcttgccaggtgtgctgattctcttccttactttttttgcctttttg
cactgctggctcaatgcctttgctgagatgttacgctttggtgacaggatgttctataag
gattggtggaactccacgtcatactccaactattatagaacctggaatgtggtggtccat
gactggctatattactatgcttacaaggactttctctggtttttctccaagagattcaaa
tctgctgccatgttagctgtctttgctgtatctgctgtagtacacgaatatgccttggct
gtttgcttgagctttttctatcccgtgctcttcgtgctcttcatgttctttggaatggct
ttcaacttcattgtcaatgatagtcggaaaaagccgatttggaatgttctgatgtggact
tctcttttcttgggcaatggagtcttactctgcttttattctcaagaatggtatgcacgt
cagcactgtcctctgaaaaataatgagttcattcccaaagaagttcttctttctctgacc
tatgcggccaatgctggtccttgtcctgaaaacttactacctcctaagaaaattaaaacc
ccaaagggcactcttccacgccttgtagaccatgtctggcatcaccctgttcgaaggaat
aaattcaaatacctgattgaccatcccgtctccctcacaggagctggaagggatatttct
tttctgtacgatgtaacatatgccaaaggacagactagggagaaggcagtttgtccccca
catttggcccgttcattacagtcacatgatggtgtcattgtgccccataagccaaagaca
ctaacagatactttgattcctgaagaatttcatattgtgtcaagtacaggagtttcaggt
ttggagtgttatgatgagaaacctaataaaagagtagaagtggcccagctgaatgatgtg
atggatactatgctagagagggctggtgtggaaaatcaggaatatacaggaccaacgaag
atgcacaaactactacatatattgaagaaggaacagaccatttacaacatgatatttcat
gaacttattcgacaagtcagtgtggactgtgcagacagaggagaacttctgtctaaagtc
agagagaggtatgtgcaaatgcttgaccagattgctcggcagatgattgatttctacaaa
gacttggtaactcagcgagtgatggaccagcgcattttagaagaattgtataatttcaag
catgttattgaagaactgaccagggaactgtgtctagttcgggcacatgatgtgaaatta
acaaaggaaacagaaaaagcccacaaggatttggcacaagctcttttaaatgcggaaaag
aatgccaagtga

>gi568815597f:179202685_179453638|GENSCAN_predicted_peptide_5|183_aa
MGHDDNGGFVEWKGGKGGEKIEKSDGCRVCVERSNTDACKDVEKGELFYKRAVYARKFPN
AEGAEKPKTKADKSNLWVKGVLLGKLTEALSRVATRQKARSSAYKEGGKRMHIDLHLPEP
CPHAKTTTSTTVHTVASRGPPTLFQLCCLHSVVTPTWKQAPQHLLQPMRMHPHNIATTAA
ADT

>gi568815597f:179202685_179453638|GENSCAN_predicted_CDS_5|552_bp
atgggccatgatgacaatggcggttttgtggaatggaaagggggaaaaggtggggaaaag
attgagaaatcggatggttgccgtgtctgtgtagaaagaagcaatacagatgcttgcaaa
gatgtggagaaaggagaactgttctataaaagggccgtatatgcaaggaagtttccaaat
gccgaaggagctgagaaaccaaaaaccaaggcagacaaatccaatttgtgggtaaagggt
gttttattggggaaactaacagaagcattgtctagggtagccacaagacagaaagcaaga
tcatcagcttataaagagggtggaaagagaatgcacatagacctgcatctgccagagcct
tgcccccatgctaagaccaccaccagcacaactgtgcacacagttgccagcaggggcccc
ccaaccctcttccagctgtgctgcctccactctgtggtgacacccacatggaagcaggca
ccccagcacctgttgcagccaatgagaatgcacccccacaacattgccactactgctgct
gctgacacatga

>gi568815597f:179202685_179453638|GENSCAN_predicted_peptide_6|497_aa
MDQIPLYKSKTIKLLEELNVNLHDFKFRKGFLDMTPKVQTKKKIKSNFSMSVTVPVKSPN
ALSYTNPGSSLVSPSLAASSTLTDLNTLSPPQTILHRNVSPGAPQRPPSTGNAGGMLGTT
DFTVPNGTGSSPVGNEFVNSRASPNLIGATGANSLGKVMPTKSPPPPGGSNLGMNSGKPD
LRVVIPASSKGMTPPLAGTLDVENWDRAGEGLKQAHQKGLKVDSSVFSTWSLVRTVLLPL
SPYYSAGQQAESKNLKESVVPPTAPIENKNRRGRIKKTSVRPRLVAEIETPIQRILRCAA
IAGEPLGPCAFPSSVRPDPNNPQQVIHEHTPLEFKLLKELKEPYVQVLARLQEAVKRQIP
HTVAAEMLTLTLAFENANADWKCALALEMEKPCGCPQGACGHGMGDWRNPGWPTMGPVPP
VRAMSQLSLSAKTERRLTRVTMTSTLITWGQLKKTMQEAEKLLEHQGQAKTPDSIFLAML
AIMSCASVKSDGPPIGK

>gi568815597f:179202685_179453638|GENSCAN_predicted_CDS_6|1494_bp
atggatcaaataccattatataagagcaaaactataaaactcttagaagaactaaacgta
aatcttcatgactttaaatttaggaaaggattcttagatatgacaccaaaagtacaaaca
aaaaagaaaataaaatcgaatttttcaatgtctgtcacagttccagtgaaaagccccaat
gctttgtcctacactaacccagggagttcactggtgtcaccatctttggcagccagctca
acgttaacagatttaaacacgctctctccacctcaaaccatattacatagaaatgtgtcc
cctggagctcctcagagaccaccaagtactggcaatgcaggtgggatgttgggcactaca
gacttcacagtgccaaatggaactggaagcagcccagtggggaatgaatttgtaaactca
agagcttctccaaatttgattggagctactggtgcaaatagtttaggtaaagtcatgcct
acaaagtctccccctccaccaggtggcagtaatcttggaatgaacagtggaaaaccagat
cttcgagttgtcatccccgcttcaagcaagggcatgacacctccactagcaggcactctt
gatgtggaaaattgggatagagcaggagaaggattaaaacaggctcatcaaaaaggtctt
aaagttgattcttcagttttctccacgtggagtttagttcgtactgtacttctgccatta
tctccttattattctgcaggacagcaggctgaatctaaaaatctgaaagaatctgtcgtc
ccacccacagctccaattgaaaataaaaacaggagagggaggataaaaaaaacatctgta
cggcctcgtttggtagcagaaatagaaaccccaatacaaagaattttacgctgtgctgcc
atagctggagagcccttaggaccttgtgcttttcctagttccgtaaggcctgatccaaat
aatccacagcaggttattcatgaacacactccactagagtttaagttgttaaaggaatta
aaagaaccctatgtgcaagtacttgcaagattacaagaggcagtgaagcgtcagattcct
cataccgtggccgcagaaatgctaaccttaactctagcttttgagaatgcaaatgcggat
tggaaatgtgcactggcactggagatggagaaaccatgtgggtgccctcaaggtgcgtgt
ggccatggaatgggagactggaggaacccagggtggccaaccatgggcccggtccctccg
gtacgagccatgagccagctgagcctgagtgcaaagacggagagaaggctgacaagggtc
acgatgacatcaaccctcataacctggggacaactcaagaaaaccatgcaggaagctgag
aaactactggagcatcagggacaggcaaaaacccctgattccatattcttggccatgtta
gccataatgtcctgtgcatctgtaaaatcggatggaccgccaattggaaaatga