GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:08:53

Sequence gi568815586f:10209385_10414790 : 205406 bp : 38.14% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3746   3835   90  1  0   81   86   197 0.981  19.34
 1.02 Intr +   8679   8757   79  2  1  120   55    82 0.984   6.31
 1.03 Intr +  11056  11315  260  2  2   66   56   187 0.718   9.56
 1.04 Term +  12403  12468   66  0  0  121   48    81 0.734   4.36
 1.05 PlyA +  13719  13724    6                               1.05

 2.00 Prom +  15074  15113   40                              -8.35
 2.01 Init +  15175  15277  103  0  1   60   68   109 0.421   4.57
 2.02 Term +  16144  16847  704  2  2   47   49   302 0.396  14.90
 2.03 PlyA +  18626  18631    6                               1.05

 3.00 Prom +  21294  21333   40                              -2.35
 3.01 Init +  24844  25025  182  0  2   75  -16   193 0.144   4.38
 3.02 Intr +  27986  28166  181  2  1   92   56   103 0.167   6.45
 3.03 Intr +  42558  42776  219  2  0  100   80    98 0.772   7.78
 3.04 Intr +  67756  67779   24  0  0  117   90    20 0.013   2.40
 3.05 Intr +  71268  71396  129  2  0   65   78    69 0.014   3.57
 3.06 Intr +  91937  91985   49  1  1   62   97    38 0.001  -0.57
 3.07 Intr +  98610  98700   91  1  1   90   91    34 0.020   2.03
 3.08 Intr + 105289 105389  101  1  2   97   58   103 0.162   7.03
 3.09 Intr + 108433 108563  131  2  2    9   38   100 0.004  -3.41
 3.10 Intr + 123405 123632  228  2  0   86   30   106 0.013   1.74
 3.11 Intr + 126775 126893  119  0  2   -4  109   163 0.188   7.54
 3.12 Intr + 128226 128373  148  0  1   43   34    61 0.097  -4.48
 3.13 Term + 128549 128623   75  1  0  111   54    63 0.131   2.06
 3.14 PlyA + 130605 130610    6                               1.05

 4.02 PlyA - 130685 130680    6                               1.05
 4.01 Sngl - 137316 135874 1443  0  0   42   47   410 0.889  27.78
 4.00 Prom - 137475 137436   40                             -11.44

 5.02 PlyA - 137838 137833    6                               1.05
 5.01 Sngl - 138673 138017  657  1  0   44   41   239 0.585  10.72
 5.00 Prom - 138766 138727   40                              -6.15

 6.02 PlyA - 138935 138930    6                               1.05
 6.01 Sngl - 139818 139189  630  0  0   59   42   422 0.806  30.63
 6.00 Prom - 143076 143037   40                              -3.55

 7.10 PlyA - 143696 143691    6                               1.05
 7.09 Term - 154826 154411  416  0  2   80   49   194 0.841   9.14
 7.08 Intr - 155280 154983  298  0  1  116  100   132 0.453  12.72
 7.07 Intr - 169321 169170  152  2  2   75   19    60 0.093  -3.24
 7.06 Intr - 170098 170063   36  2  0   60  131    29 0.705   1.72
 7.05 Intr - 170408 170316   93  0  0  103   93    67 0.908   7.72
 7.04 Intr - 177626 177519  108  0  0  102  115    24 0.279   5.84
 7.03 Intr - 198998 198945   54  0  0   81   83    40 0.437   0.83
 7.02 Intr - 199626 199528   99  1  0  149   63    52 0.702   7.96
 7.01 Init - 200191 200005  187  1  1   81   93    85 0.991   7.57

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 158373 158498  126  2  0   65   40   188 0.831   9.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:10209385_10414790|GENSCAN_predicted_peptide_1|164_aa
MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQF
YFLIRKRIHLRPEDALFFFVNNTIPPTSATMGQLYEVMVLVAQYWMPSSAVWHPLALVLD
ALITHLRSGAEGVIYPDPLTYGSDNHEEDYFLYVAYSDESVYGK

>gi568815586f:10209385_10414790|GENSCAN_predicted_CDS_1|495_bp
atgaagttccagtacaaggaggaccatccctttgagtatcggaaaaaggaaggagaaaag
atccggaagaaatatccggacagggtccccgtgattgtagagaaggctccaaaagccagg
gtgcctgatctggacaagaggaagtacctagtgccctctgaccttactgttggccagttc
tacttcttaatccggaagagaatccacctgagacctgaggacgccttattcttctttgtc
aacaacaccatccctcccaccagtgctaccatgggccaactgtatgaggtaatggttctg
gttgcacaatactggatgccgtccagtgcagtctggcatcctctagcccttgttctagat
gcgttgataacacatctgagaagtggggcagaaggtgttatttatccggatcctcttaca
tatggcagtgacaatcatgaggaagactattttctgtatgtggcctacagtgatgagagt
gtctatgggaaatga

>gi568815586f:10209385_10414790|GENSCAN_predicted_peptide_2|268_aa
MKPRTLAVSVTALKVACLESVPSDVQMCSEFLPSDSGAQLASPSGSHTGAAGGAACQSRA
VRSHSSALGLFVPSRSMGLGAVEQGVVLVGEARAAQVPMEWVGGSGMAGCRSRALPRGKA
AKARREIERSAGGPALLGDPVHPPQPLARVLSPPLPRASRAGWLAAPSAGPAKSTPTRNS
SWRASAPRSPGSARASPSTPPSKLREWAPALASPERGSHSAVGGLKGSSNATKVGAQAGE
VPRASEGSEDCQHAVTSQQAGLDLALLY

>gi568815586f:10209385_10414790|GENSCAN_predicted_CDS_2|807_bp
atgaagccgcggaccctcgcggtgagtgttacagctcttaaggtggcgtgtctggagtct
gtcccttctgatgttcagatgtgttcggagtttcttccttctgactcgggagcccagctg
gcttcacccagtggatcccacaccggggctgcaggtggagctgcctgccagtcccgcgcc
gtgcgctcgcattcctcagcccttgggttgtttgttccttcccggtcgatgggactgggc
gccgtggagcagggggtggtgctcgtcggggaggctcgggccgcacaggtgcccatggag
tgggtgggaggctcaggcatggcgggctgcaggtcccgagccctgccccgcgggaaggca
gctaaggcccggcgagaaatcgagcgcagcgccggtgggccagcactgctgggggaccca
gtacaccctccgcagccactggcccgggtgctaagtcccccattgccccgggccagcagg
gctggctggctggctgctccgagtgcggggcccgccaagtccacgcccacccggaactcc
agctggcgcgcaagcgccccacgcagccccggttccgctcgtgcctctccctccacacct
ccctccaagctgagggagtgggctccagccttggccagcccagaaaggggctcccacagt
gcagtgggggggctgaagggctcctcaaatgccaccaaagtgggagcccaggcaggggag
gtgccgagagcaagcgagggctctgaggactgccagcatgctgtcacttctcagcaggct
ggattggatttggcacttctttactga

>gi568815586f:10209385_10414790|GENSCAN_predicted_peptide_3|558_aa
MALGISAPVALQGTAPLLAVLSGCSFPKHMLQTVNGSPFWGLENGGPLLRARLGSAPVET
LELFSSLNKILHSYHSSVVKCDLILLGRWTKAWDPLSAGGGCHTGPLPLQVEGNHPTGSY
RVPNRPQYRSVAWGLGTSGLVNYTFLLNSGETTYQFLRGNKDFLKNHIKLNYCFLLIEVD
NLTLVFVIEKTLGQIFDIPKVELLFSYQCFPMVENRQKPEGEEDCVIQLSELSCTECSKK
AWRMEVLHTNKTTNATQCGGPAQLQQFNAVLSEKVHIVPSLLRSWNIISHGRFPSFETFN
TKNCIAYNPNGNALDESCEDKNRYIWLEKPQETYSNDRRESKHIPLRMAAERRRAEQKEK
YPLIKSSDLFYISIKMIKTNKTKLVYKYTKSHCGGKSSLIYFSRYRSNRTAKWNSSQKPD
SGRCTRVLAPNFTRVRVKRPPNRLCGASEAIRQRQSSAAKLRKSGKESVREPWARVPGAL
GVAARKAGLAAKGEGEGVEGYLPLSQKSREGVETRREGVGVLAPSPEKRDLLLRKMKGIE
IKKRERLKSGKEKVVEGQ

>gi568815586f:10209385_10414790|GENSCAN_predicted_CDS_3|1677_bp
atggccttgggaatctctgcccctgtggctttgcagggtacagccccactcctggctgtg
cttagtggctgcagctttcccaagcacatgttgcaaactgtcaatggatcaccattctgg
ggtttggagaatggtggccctcttctcagagctcgactaggcagtgctccagtggagact
ctagaactgttttcatcgctcaataaaattctccactcttaccattcttcagttgtcaag
tgtgacctcattcttcttggacgctggacaaaagcttgggacccactaagtgcaggtgga
ggctgtcacactggccctttgcccttgcaagtggagggcaaccaccccactggcagctac
agggttcctaacaggccacagtaccggtctgtggcctggggcttggggacctctggtctg
gtcaattacacatttctcctgaattctggagagacaacataccagttcctcagaggaaac
aaagattttcttaaaaatcacatcaaattaaattactgctttttgcttattgaagtggat
aatcttactcttgtttttgtcattgaaaagacactaggccagatatttgatattccaaag
gtagagcttctcttctcctaccaatgctttccaatggttgaaaacagacagaagccagag
ggtgaggaagactgtgtgatacagttgtcagagctcagctgcacagaatgcagcaaaaaa
gcatggagaatggaggttctgcataccaacaaaaccaccaatgccacccagtgtggaggg
cccgctcagcttcaacaattcaacgctgttctttctgaaaaagtacacatcgtgccttct
ctacttcgctcttggaacataatttctcatggcagatttccatcatttgaaacttttaat
acaaagaactgcatagcgtataatccaaatggaaatgctttagatgaatcctgtgaagat
aaaaatcgttatatctggttggagaagcctcaggaaacttacagtaatgacagaagggaa
agcaaacacatccctctacgcatggcagcagaaaggagacgtgctgagcaaaaggaaaaa
taccctcttattaaatcatcagatctattctacatttcaatcaaaatgattaaaacaaat
aaaaccaaacttgtttacaaatatacgaagagtcactgtggagggaaaagctctttaatt
tatttctcaagatatagatccaacaggactgcaaagtggaacagttctcagaagcctgat
tcaggaagatgtacccgggttttggcaccaaatttcacacgcgtccgtgtgaagagacca
ccaaacaggctttgtggggcttccgaggcgatccggcagcgtcagtcttcagctgctaag
ctgagaaaatctgggaaggagtcagtcagagagccttgggccagagttccaggggctctg
ggagtggctgccagaaaagcgggacttgccgctaagggtgaaggagaaggggttgagggg
tacttgcccctgtcccagaaaagcagagaaggggtagagacaaggagagaaggggttggg
gtacttgccccttccccagaaaagcgggacttgctgctaaggaaaatgaaaggaatagaa
attaagaaaagggagagattgaagagtggaaaggagaaagtggttgagggacagtga

>gi568815586f:10209385_10414790|GENSCAN_predicted_peptide_4|480_aa
MIISINAEKAFDKIQQPLMLKTLNKLGIDGTYFKIIRAIYDKPTANIMLNGQKLEAFPLK
TGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVS
AQNLLKLISNFSKVSGYKINVQKSQAFLYTSNRQTESQIMSELPFTIASKRMKYLGIQLT
RDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPM
TFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNR
DIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWEKWLAICRKLKLDPFLT
PYTEINSRRIKDLNVRPKAIKTLVENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLI
KLKSFCTAKETTIRVNRQPTKWEKIFTTCSSDKGLISRIYNELKQIYKKKTTPSKSGQRT

>gi568815586f:10209385_10414790|GENSCAN_predicted_CDS_4|1443_bp
atgattatctcaataaatgcagaaaaggcctttgacaaaattcaacaacccttaatgcta
aaaactctcaataaattaggtattgatgggacgtatttcaaaataataagagctatttat
gacaaacccacagccaatatcatgctgaatggacaaaaactggaagcattccctttgaaa
actggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagtt
ctggccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaa
gtcaaattgtccctctttgcagatgacatgattgtatatctagaaaaccccattgtctca
gcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccagcaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaatgaaatacctaggaatccaacttaca
agggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataacaccacatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaagtggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacagaaatcaattcaagacggattaaagacttaaacgttagacctaaagccata
aaaaccctagtagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactcaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcacaacctgctcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaccccatcaaaaagtgggcaaaggaca
tga

>gi568815586f:10209385_10414790|GENSCAN_predicted_peptide_5|218_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHILGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNCSTTWKLNNLLLNDHWV
HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNVHKRKQERSKINTLTSQLK
ELEKQEQTHSKASGSQEVTKIRAELKDIETDKTIQKNQ

>gi568815586f:10209385_10414790|GENSCAN_predicted_CDS_5|657_bp
atgggagactttaacaccccactctcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactatctgtcagaccacagtgcaatcaaactagaactcaggattaagaatctc
actcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgaccactgggta
cataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgagaacaaagacaca
acataccagaatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgtccacaagagaaagcaggaaagatctaaaatcaacaccctgacatcacaattaaaa
gaactagagaagcaagagcaaacacattcaaaagctagcggaagtcaagaagtaactaag
atcagagcagaactgaaggacatagagacagacaaaaccattcaaaaaaatcaatga

>gi568815586f:10209385_10414790|GENSCAN_predicted_peptide_6|209_aa
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRV
TLKGKPIRLTVDLSAETLQARREWGPIFDILKEKNFQPRNSYPAKLSLISEGEIKYFTEK
QMLRDFVTTRPALKELLKEVLNMERNNRY

>gi568815586f:10209385_10414790|GENSCAN_predicted_CDS_6|630_bp
atggaagatgagatgaatgaaatgaagcgagaagggaagtttagagaaaaacgaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
accctcaaagggaagcccatcagactaacagtggatctctcggcagaaactctacaagcc
agaagagagtgggggccaatattcgacattcttaaagaaaagaattttcaacccagaaat
tcatatccagccaaactaagcctcataagtgaaggagaaataaaatactttacagagaag
caaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagtg
ctaaacatggaaaggaacaaccggtactag

>gi568815586f:10209385_10414790|GENSCAN_predicted_peptide_7|480_aa
MNKQRGTYSEVSLAQDPKRQQRKLKGNKISISGTKQEIFQVELNLQNASSDHQGNDKTYH
CKGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPCIGVLEQNNFSLNRRMQKEMSEFHN
YNLDLKKSDFSTRWQKQRCPVVKSKCRENASPFFFCCFIAVAMGIRFIIMVTIWSAVFLN
SLFNQEVQIPLTESYCGPCPKNWICYKNNCYQFFDESKNWYESQASCMSQNASLLKVYSK
EDQVQQTRSYYRSFGHCLARKVSSPVTACYSCKARPISCMQCPRSDFPPHSPQSTQPVLR
DLCLPTSLPALASPETIAFTHFHTPSLPQDSSLDEMSLSHVPDPVNHFHFVSGDISFIQI
GRPLLLPPATLGWISGQSLGGDQAPLCPYGTGFPALGLYSLPQFLKCWYRPAAPSSVPLR
CQAGCWDVGRAGLYIRVKLSCGTPWMPGLSWPRGPSIAGKGDSKSVISNPDEPPEMYRDI

>gi568815586f:10209385_10414790|GENSCAN_predicted_CDS_7|1443_bp
atgaataaacaaagaggaacctactcagaagtgagtctggcccaggacccaaagaggcag
caaaggaaacttaagggcaataaaatctccatttcaggaaccaaacaggaaatattccaa
gtagaattaaaccttcaaaatgcttcttcggatcatcaagggaatgacaagacatatcac
tgcaaaggtttactgccacctccagagaagctcactgctgaggtcctaggaatcatttgc
attgtcctgatggccactgtgttaaaaacaatagttcttattccttgtattggagtactg
gagcagaacaatttttccctgaatagaagaatgcagaaagagatgagtgaatttcataat
tataacttggatctgaagaagagtgatttttcaacacgatggcaaaagcaaagatgtcca
gtagtcaaaagcaaatgtagagaaaatgcatctccattttttttctgctgcttcatcgct
gtagccatgggaatccgtttcattattatggtaacaatatggagtgctgtattcctaaac
tcattattcaaccaagaagttcaaattcccttgaccgaaagttactgtggcccatgtcct
aaaaactggatatgttacaaaaataactgctaccaattttttgatgagagtaaaaactgg
tatgagagccaggcttcttgtatgtctcaaaatgccagccttctgaaagtatacagcaaa
gaggaccaggtccagcagacccggtcctattacaggagtttcggacactgcttagccagg
aaggtgtcttcccctgtcacagcctgctacagctgcaaagctcgtcctatcagctgtatg
caatgtcctaggtctgatttccccccacactcgcctcagagcacacagcccgtgctaagg
gatctgtgcctccccacgtcactccctgcattggcctctcccgagaccatcgctttcaca
cactttcacacaccttccttgccccaggattcctcattggacgaaatgagcctctctcat
gtcccggatccagtgaaccactttcactttgttagtggggacataagcttcatccaaatt
ggcaggccactcctgctgcccccagccactctgggttggattagtggtcagtccctggga
ggtgatcaagctcccctttgtccctatgggacgggctttcctgccttgggcctatactcc
ttaccacagttcctgaagtgctggtatcgtcctgcagccccatcctcggttccattgcgc
tgccaggcagggtgctgggacgtggggagagctggtctatatatccgggtgaagctcagc
tgtggcacaccttggatgccgggtctctcctggccccggggacctagtatcgcaggcaaa
ggggacagtaaatctgtcatctccaatcctgatgagcccccagaaatgtatcgggatata
taa