GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:25:05

Sequence gi568815582f:57258817_57463585 : 204769 bp : 48.05% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 Intr -   3254   3081  174  2  0   90   89   217 0.782  22.14
 1.05 Intr -   5709   5557  153  0  0   66   73    45 0.243   1.07
 1.04 Intr -  10319  10191  129  2  0   57   94    30 0.079   1.39
 1.03 Intr -  20757  20733   25  2  1   65   88    20 0.010  -2.27
 1.02 Intr -  25439  25360   80  2  2   86   49    85 0.235   2.75
 1.01 Init -  25724  25590  135  2  0  122   85   274 0.996  30.64
 1.00 Prom -  26384  26345   40                              -3.96

 2.00 Prom +  56112  56151   40                              -3.16
 2.01 Sngl +  62481  62747  267  2  0   30   47   199 0.581   5.23
 2.02 PlyA +  63446  63451    6                               1.05

 3.03 PlyA -  64502  64497    6                               1.05
 3.02 Term -  84559  84390  170  2  2   79   41    57 0.322  -1.86
 3.01 Init -  89634  89556   79  0  1   83   90    54 0.806   6.32
 3.00 Prom -  93349  93310   40                              -4.06

 4.00 Prom +  93359  93398   40                              -4.06
 4.01 Init + 100001 100073   73  1  1   68   94   141 0.999  11.94
 4.02 Term + 101621 101748  128  0  2   73   48   193 0.432  12.24
 4.03 PlyA + 103041 103046    6                               1.05

 5.00 Prom + 107046 107085   40                              -7.46
 5.01 Init + 113753 113822   70  1  1   94  119   130 0.993  15.92
 5.02 Intr + 120818 120938  121  0  1   75   53    74 0.728   2.15
 5.03 Term + 123214 124216 1003  1  1   99   43   634 0.853  51.57
 5.04 PlyA + 126205 126210    6                               1.05

 6.07 PlyA - 126962 126957    6                               1.05
 6.06 Term - 133617 133505  113  1  2   56   42    75 0.204  -1.58
 6.05 Intr - 135259 135170   90  2  0  120   92   -33 0.158   0.27
 6.04 Intr - 139214 139026  189  0  0   90   80    91 0.971   8.06
 6.03 Intr - 140549 140404  146  1  2  138   94    33 0.688   8.83
 6.02 Intr - 145662 145578   85  1  1   94   80    20 0.464   0.68
 6.01 Init - 149519 149474   46  2  1   35   92    41 0.149   0.05
 6.00 Prom - 150214 150175   40                              -9.75

 7.00 Prom + 151783 151822   40                              -6.86
 7.01 Init + 155117 155186   70  1  1  120   94   197 0.999  22.71
 7.02 Intr + 156265 156382  118  2  1  122   86   149 0.822  17.62
 7.03 Term + 158416 158515  100  1  1   63   41   102 0.438   0.60
 7.04 PlyA + 159973 159978    6                               1.05

 8.09 PlyA - 162151 162146    6                               1.05
 8.08 Term - 170464 170354  111  1  0  115   49   119 0.990   9.26
 8.07 Intr - 171523 171442   82  0  1   88   46    70 0.933   2.44
 8.06 Intr - 172654 172335  320  1  2   85  105   180 0.798  14.16
 8.05 Intr - 173744 173671   74  0  2   32   89   153 0.991   8.93
 8.04 Intr - 175396 175228  169  1  1   59  110   129 0.955  11.72
 8.03 Intr - 177916 177840   77  2  2   78   94    31 0.993   1.93
 8.02 Intr - 180518 180366  153  0  0   72   82    40 0.750   1.84
 8.01 Init - 182112 181956  157  0  1   76  101   179 0.999  18.08
 8.00 Prom - 185395 185356   40                              -8.16

 9.00 Prom + 186337 186376   40                              -6.16
 9.01 Init + 188690 188762   73  1  1   93   93   129 0.990  13.13
 9.02 Intr + 192224 192392  169  0  1   69   96    98 0.987   7.70
 9.03 Intr + 193985 194120  136  2  1   63   89   226 0.981  20.77
 9.04 Intr + 197688 197830  143  2  2   76   83    75 0.881   4.95
 9.05 Intr + 198115 198199   85  1  1  110   48    33 0.890   1.32
 9.06 Intr + 199430 199534  105  1  0  106   76   122 0.999  13.21
 9.07 Intr + 200749 200904  156  0  0   25   96   261 0.993  20.81
 9.08 Intr + 201235 201288   54  0  0   76  113    37 0.912   4.18
 9.09 Intr + 203867 203994  128  1  2   29   60   206 0.237  11.38
 9.10 Intr + 204213 204262   50  0  2   91   87    51 0.843   3.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_1|232_aa
MAEFPSKVSTRTSSPAQGAEASVSALRPDLGFVRSRLGALMLLQLGASRTDAPKIALHPS
HHDTTPWPSLRAPPEYLGRQGVKGSAQGPSAYEELRECSSKGDLRAGLDFWGLLWEHHRL
ICQGRVLVSVMVEEIGLLVPKHIVYLAYIMCRALLGTEDTAVNKTQNLPRRAGKVLGLLV
WALIADTPYHLYPAYGWVMFVAVFLWLVTIVLFNLYLFQLHMKLYMVPWPLV

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_1|696_bp
atggccgagttcccgtcgaaagttagcacgcggaccagcagtcctgcgcagggcgccgaa
gcctcggtgtcggcgctgcgcccggacctgggcttcgtgcgctcccgcctcggggcgctc
atgctgctgcagctgggcgcttcccgcacggacgcccccaagatcgccctgcatccctct
caccacgacactaccccgtggccgtcgctgcgagcgcctcctgagtatctgggacgacag
ggggtgaaggggtctgcccaaggcccctcagcctatgaggagctgagggagtgcagctcc
aagggagatctgagggctgggctggatttctggggcctcctgtgggagcaccaccgcctt
atctgtcagggcagggttctggtctctgtcatggttgaagaaataggattgttagttcct
aagcacattgtgtatttagcgtatattatgtgtcgggcactgttgggcactgaagataca
gcagtgaacaaaacccagaatcttcctcggagagcagggaaggtgctggggctgctggtg
tgggcgctgattgcggacaccccgtaccacctgtatccggcctatggctgggtgatgttc
gtcgctgtcttcctctggctggtgacaatcgtcctcttcaacctctacctgtttcagctg
cacatgaagttgtacatggttccctggccactggtg

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_2|88_aa
MLYDRINDEKSRNRPFSQDGTKGKEGSSCPPKAEAKSKALKDKKAVLKGVHSHIKKKIHT
SPIFPWPRRCDSRGSPDILRRAPQEKQA

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_2|267_bp
atgctatatgatagaataaatgatgaaaaatctcgaaatagacccttttcacaagatggc
accaaaggcaaagaaggaagctcctgcccccctaaagctgaagccaaatcgaaggctttg
aaggacaagaaggcagtgctgaaaggtgtccacagccacataaaaaagaagatccacaca
tcacccatcttcccgtggccaagacgctgcgactccagaggcagcccagatatcctcaga
agagcaccccaggagaaacaagcttga

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_3|82_aa
MQFWVLGVPNKELEETHMESKAKQQQETRSYQKTTPTCNCRICPLHFPCSSLKDKLVQPK
ACGSLEAQDSFECGPTQMRKLS

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_3|249_bp
atgcagttctgggttcttggtgtcccgaacaaagaactggaggagacacacatggaaagc
aaagcaaagcagcaacaggaaacgagaagttaccagaagaccacacccacctgcaactgt
cgcatctgcccactgcattttccttgttcctcactcaaggataagcttgtccaacccaag
gcctgtgggtcgcttgaggcccaggacagctttgaatgtggcccaacacaaatgcgtaaa
ctttcttaa

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_4|66_aa
MDRLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSC
PRPGVV

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_4|201_bp
atggatcgcctacagactgcactcctggttgtcctcgtcctccttgctgtggcgcttcaa
gcaactgaggcaggcccctacggcgccaacatggaagacagcgtctgctgccgtgattac
gtccgttaccgtctgcccctgcgcgtggtgaaacacttctactggacctcagactcctgc
ccgaggcctggcgtggtgtga

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_5|397_aa
MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK
RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG
MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP
VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA
PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE
PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF
TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_5|1194_bp
atggctccgatatctctgtcgtggctgctccgcttggccaccttctgccatctgactgtc
ctgctggctggacagcaccacggtgtgacgaaatgcaacatcacgtgcagcaagatgaca
tcaaagatacctgtagctttgctcatccactatcaacagaaccaggcatcatgcggcaaa
cgcgcaatcatcttggagacgagacagcacaggctgttctgtgccgacccgaaggagcaa
tgggtcaaggacgcgatgcagcatctggaccgccaggctgctgccctaactcgaaatggc
ggcaccttcgagaagcagatcggcgaggtgaagcccaggaccacccctgccgccggggga
atggacgagtctgtggtcctggagcccgaagccacaggcgaaagcagtagcctggagccg
actccttcttcccaggaagcacagagggccctggggacctccccagagctgccgacgggc
gtgactggttcctcagggaccaggctccccccgacgccaaaggctcaggatggagggcct
gtgggcacggagcttttccgagtgcctcccgtctccactgccgccacgtggcagagttct
gctccccaccaacctgggcccagcctctgggctgaggcaaagacctctgaggccccgtcc
acccaggacccctccacccaggcctccactgcgtcctccccagccccagaggagaatgct
ccgtctgaaggccagcgtgtgtggggtcagggacagagccccaggccagagaactctctg
gagcgggaggagatgggtcccgtgccagcgcacacggatgccttccaggactgggggcct
ggcagcatggcccacgtctctgtggtccctgtctcctcagaagggacccccagcagggag
ccagtggcttcaggcagctggacccctaaggctgaggaacccatccatgccaccatggac
ccccagaggctgggcgtccttatcactcctgtccctgacgcccaggctgccacccggagg
caggcggtggggctgctggccttccttggcctcctcttctgcctgggggtggccatgttc
acctaccagagcctccagggctgccctcgaaagatggcaggagagatggcggagggcctt
cgctacatcccccggagctgtggtagtaattcatatgtcctggtgcccgtgtga

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_6|222_aa
MSEWMDGGWMMDGRVAPSFRLLGPETWALSLTPLPLAPNFPSVGPPLLLPWWLPTPDTLE
RGPQPCGWDFSFIDLMVVVAMYKHLETGQTGPEDGEPIEHDCQQIAAQTYATQEDLLEVP
LANPDLNLYADGSSFAENGIQRAGYAIVTDVTVLERSAVVTGTQRETGHIHAFPHRSFRN
TVGQADIPRNNTLHPIKLTFNINHHNIRAIKTLEHQRISEKL

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_6|669_bp
atgagtgaatggatggatggaggatggatgatggatggacgtgtggccccttccttccgg
ttactagggccagaaacctgggcgctatccctgacgcctcttcctctcgcccccaacttc
ccatctgttgggccaccactgctgttgccctggtggttacctacccctgacactctagaa
agagggccccagccatgtggatgggatttctccttcattgatctgatggtggtcgtggca
atgtataagcacctggaaacaggtcagacaggtccagaggatggggaaccaattgagcat
gactgccaacaaattgcagcccagacttatgccacccaagaggatctcttggaagtcccc
ttagctaatcctgaccttaacctatatgctgatggaagttcatttgcggagaatgggata
caaagggcaggttatgccatagttactgatgtaacagtacttgaaagatctgcagtggtc
actgggacacaaagggaaacagggcacatccatgccttccctcacagatctttcagaaac
acagtggggcaggcagacatacctaggaacaatactttgcatccaatcaagttgacattc
aacattaaccatcacaacatccgagccattaaaactctcgagcaccaacgtatttcagag
aaactgtaa

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_7|95_aa
MAPLKMLALVTLLLGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRD
AIVQLIAGQMIEPKFTFQYGHSDNEVDKTSELACL

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_7|288_bp
atggccccactgaagatgctggccctggtcaccctcctcctgggggcttctctgcagcac
atccacgcagctcgagggaccaatgtgggccgggagtgctgcctggagtacttcaaggga
gccattccccttagaaagctgaagacgtggtaccagacatctgaggactgctccagggat
gccatcgttcagctcattgcagggcagatgatagaacccaagtttactttccagtacggg
cacagcgataacgaggttgataaaaccagtgaactggcttgcctgtga

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_8|380_aa
MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSF
DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALT
LSGLVEVKELQREPLTPEEVQSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITK
KSSPSVKPAVDPAAAKLWTLSANDMEDDSMCIFCGCSLTHRWPLEHVVRLNMMINQKEDR
VDTFFTLDSKFPLEACSHFSFSLAETTTVSLIALNTLQDLIDSDELLDPEDLKKPDPASL
RAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLGDAFRCASCPYLG
MPAFKPGEKVLLSDSNLHDA

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_8|1143_bp
atggcagattttgggatctctgctggccagtttgtggcagtggtctgggataagtcatcc
ccagtggaggctctgaaaggtctggtggataagcttcaagcgttaaccggcaatgagggc
cgcgtgtctgtggaaaacatcaagcagctgttgcaatctgcccacaaagaatccagcttt
gacattattttgtcaggtttagtcccaggaagcaccactctgcacagtgctgagattttg
gctgaaatcgcccggatccttcggcctggtggatgtctttttctgaaggagccagtagag
acagctgtagataacaatagcaaagtgaagacagcatctaagctgtgttcagccctgact
ctttctggtcttgtggaagtgaaagagctgcagcgggagcccctaacccctgaggaagta
cagtctgttcgagaacaccttggtcatgaaagtgacaacctgctgtttgttcagatcaca
ggcaaaaaaccaaactttgaagtgggttcttctaggcagcttaagctttccatcaccaag
aagtcttctccttcagtgaaacctgctgtggaccctgctgctgccaagctgtggaccctc
tcagccaacgatatggaggacgacagcatgtgcatcttctgtggatgtagtttaactcac
cgttggcctcttgagcatgtggtcaggttgaacatgatgatcaaccaaaaggaggacagg
gtggacaccttctttaccctggactccaagtttcctctcgaagcctgcagtcactttagc
ttttcattagcagagaccacgactgtatcactcattgctttgaacactctccaggatctc
attgactcagatgagctgctggatccagaagatttgaagaagccagatccagcttccctg
cgggctgcttcttgtggggaagggaaaaagaggaaggcctgtaagaactgcacctgtggc
cttgccgaagaactggaaaaagagaagtcaagggaacagatgagctcccaacccaagtca
gcttgtggaaactgctacctgggcgatgccttccgctgtgccagctgcccctaccttggg
atgccagccttcaaacctggggaaaaggtgcttctgagtgatagcaatcttcatgatgcc
tag

>gi568815582f:57258817_57463585|GENSCAN_predicted_peptide_9|367_aa
MAAAAVSGALGRAGWRLLQLRCLPVARCRQALVPRAFHASAVGLRSSDEQKQQPPNSFSQ
QHSETQGAEKPDPESSHSPPRYTDQGGEEEEDYESEEQLQHRILTAALEFVPAHGWTAEA
IAEGAQSLGLSSAAASMFGKDGSELILHFVTQCNTRLTRVLEEEQKLVQLGQAEKRKTDQ
FLRDAVETRLRMLIPYIEHWPRALSILMLPHNIPSSLSLLTSMVDDMWHYAGDQSTDFNW
YTRRAMLAAIYNTTELVMMQDSSPDFEDTWRFLENRVNDAMNMGHTAKQVKSTGEALVQG
LMGAAVTSPRSRRGGWWPLGEMPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFI
AEVPIIX

>gi568815582f:57258817_57463585|GENSCAN_predicted_CDS_9|1101_bp
atggcggcggcggcggtatctggtgcgcttggccgggcgggctggaggctcctgcagctg
cgatgcctgcccgtggcccgttgccgacaagccctggtgccgcgtgccttccatgcttca
gctgtggggctaaggtcttcagatgagcagaagcagcagcctcccaactcattttctcag
cagcattctgagacacagggggcagaaaaacctgatccagagtcttctcattcacccccc
aggtatacagaccagggcggcgaggaggaggaggactatgaaagtgaggagcagttgcag
caccgcatcctgacggcagcccttgagtttgtgcccgcccacgggtggacagcagaggcg
attgcagaaggagcccagtctctgggtctctccagtgcagcagccagcatgttcgggaag
gatggcagtgagctaatactgcattttgtgacccagtgcaatacccggctcacacgtgtg
ctagaagaggagcagaagctggtacagttgggccaggcggagaagaggaagacagaccag
ttcctgagggatgcagtggaaaccagactgagaatgctgatcccatacattgagcactgg
ccccgggccctcagcatcctcatgctccctcacaacatcccgtccagcctgagcctgctc
accagcatggtggatgacatgtggcattacgctggggaccagtccactgattttaactgg
tacacccgccgagccatgctggctgccatctacaacacaacagagctggtgatgatgcag
gactcctctccagactttgaggacacttggcgcttcctggaaaaccgggttaatgatgca
atgaacatgggccacactgccaagcaggtaaagtccacaggagaggcactggtgcaagga
ctcatgggtgcagcagtgacgtcaccgcggagcagacgcggaggctggtggcccctgggc
gagatgccgtacgccaaccagcctaccgtgcggatcacggagctcactgacgagaatgtc
aagttcatcatcgagaacaccgacctggcggtggccaattcgattcggagggtcttcatc
gctgaggttcccataatagnn