GENSCAN 1.0	Date run:  5-Nov-116	Time: 22:56:51

Sequence gi568815586f:120625886_120839445 : 213560 bp : 46.45% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   5687   5726   40                              -1.56
 1.01 Init +  14801  15454  654  1  0   42  110   509 0.429  43.39
 1.02 Term +  15636  15956  321  2  0   76   54   102 0.323   0.42
 1.03 PlyA +  21270  21275    6                               1.05

 2.00 Prom +  22618  22657   40                              -2.86
 2.01 Init +  30235  30387  153  0  0   62   57   242 0.213  17.39
 2.02 Intr +  33083  33340  258  1  0   72   81   116 0.800   6.96
 2.03 Intr +  33993  34023   31  2  1   93   93    17 0.863   0.40
 2.04 Intr +  34311  34454  144  1  0   94   84   337 0.999  34.15
 2.05 Intr +  34846  34955  110  2  2   88   82   162 0.999  15.60
 2.06 Intr +  35186  35333  148  1  1  103  100   217 0.983  24.21
 2.07 Term +  40990  41015   26  2  2   93   54    28 0.082  -1.71
 2.08 PlyA +  41417  41422    6                               1.05

 3.00 Prom +  42042  42081   40                              -3.56
 3.01 Init +  61412  61823  412  1  1  103   77   581 0.935  53.18
 3.02 Intr +  68206  68384  179  2  2  117  100   302 0.997  33.94
 3.03 Intr +  68939  69115  177  1  0   50   86   169 0.999  13.02
 3.04 Intr +  69210  69267   58  2  1  106   78    45 0.994   3.76
 3.05 Term +  70431  70660  230  1  2   66   54   314 0.979  22.59
 3.06 PlyA +  75954  75959    6                               1.05

 4.00 Prom +  79410  79449   40                              -4.66
 4.01 Init +  84590  84833  244  1  1   82   70   601 0.991  53.60
 4.02 Intr +  87389  87502  114  0  0   96   96    93 0.999  11.32
 4.03 Intr +  90743  90854  112  0  1   77   83   171 0.999  14.94
 4.04 Intr +  90985  91157  173  1  2    0   36   214 0.973   6.99
 4.05 Intr +  94035  94143  109  1  1   66  100   166 0.976  14.94
 4.06 Intr +  99940 100046  107  1  2   76  105    46 0.096   4.96
 4.07 Intr + 101141 101304  164  0  2   87   94   127 0.812  12.89
 4.08 Intr + 111101 111250  150  1  0   98   66   315 0.755  30.66
 4.09 Intr + 111471 111582  112  2  1  100   82   113 0.999  11.85
 4.10 Intr + 111952 112103  152  2  2   71   86   128 0.999  10.78
 4.11 Intr + 112395 112565  171  2  0   98   89   203 0.998  21.54
 4.12 Intr + 112648 112785  138  0  0   28   95   301 0.993  25.46
 4.13 Intr + 112935 113030   96  2  0   25   44   160 0.814   5.51
 4.14 Intr + 113255 113311   57  1  0   28  109   112 0.977   6.38
 4.15 Intr + 113411 113524  114  1  0   94   18   337 0.264  27.94
 4.16 Intr + 114395 114673  279  1  0   40   53   183 0.232   7.67
 4.17 Intr + 134053 134208  156  0  0   99   80    81 0.956   8.61
 4.18 Term + 135304 135429  126  0  0   70   44   117 0.974   3.78
 4.19 PlyA + 136202 136207    6                              -0.45

 5.10 PlyA - 137365 137360    6                               1.05
 5.09 Term - 139185 139114   72  0  0   71   45    52 0.213  -2.89
 5.08 Intr - 140487 140378  110  1  2  128  100   -17 0.553   3.50
 5.07 Intr - 141708 141509  200  2  2   56   82   229 0.958  18.09
 5.06 Intr - 142603 142440  164  1  2   72  116   138 0.999  13.77
 5.05 Intr - 143174 143068  107  0  2  121   94   122 0.368  16.03
 5.04 Intr - 156882 156770  113  2  2   82  101     5 0.073   1.22
 5.03 Intr - 158287 158227   61  2  1   62   75    55 0.251  -0.61
 5.02 Intr - 165672 165584   89  2  2  104   55    99 0.531   7.81
 5.01 Intr - 185001 184924   78  2  0  116  110    -7 0.104   2.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100046   46  1  1   71  105   120 0.880  10.90
S.002 Term + 102441 102491   51  2  0   68   43   114 0.881   2.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:120625886_120839445|GENSCAN_predicted_peptide_1|324_aa
MGGGDGAAFKRPGDGARLQRVLGLGSRREPRSLPAGGPAPRRTAPPPPGHASAGPAAMSS
HIAKSESKTSLLKAAAAAASGGSRAPRHGPARDPGLPSRRLPGSCPATPQSSGDPSSRRP
LCRPAPREEGARGSQRVLPQAHCRPREALPAAASRPSPSSPLPPARGRDGEERGLSPALG
LRGSLRARGRGDSVPAAASEADPFLHRLRPMLSSAFGQHPVRCPRSGPLGARPSPLASLI
PARTRQSWKRATSTTVLEICGGQGGALRAGGAKPTPLASGQYRQGGTQESKRFGVWGSRE
GTSENTELLEGEGHWPLPIMSLKA

>gi568815586f:120625886_120839445|GENSCAN_predicted_CDS_1|975_bp
atgggcggcggcgacggggccgcatttaagcggccgggggacggcgcccgcctccagcgc
gtcctcgggcttggctcccgccgggagccccgttctctgcccgccgggggccccgcgccg
cgccgcaccgcgccgcccccgccgggccatgcgagcgcgggccccgccgcgatgagctcg
cacatcgccaaaagcgagtccaagacgtcgctgctgaaggcggcggcggcggcggcgagc
gggggcagccgggctccccgccacggccctgcccgggacccggggctgcctagccgccgg
ctacccggctcctgcccggcgacgccgcagtcgtccggggaccccagttcgcggaggccc
ctgtgccggccggcgccgcgagaggagggcgcgcgggggagccagcgtgtgctcccccag
gcgcactgcaggccccgggaggcgctgccggccgcggcgtcccgaccttcgccgtcgtcg
ccgctgccgccggcccgcgggcgggatggggaggaacggggactgtccccggcgctcggc
ctccggggctctctgcgagcccggggccgcggggactccgttccagccgccgcgtccgag
gcggacccgttcctccaccggctgcgccccatgctcagctccgcctttggccagcacccc
gtgcgctgtccacgctccgggcctcttggggcaaggccctccccgctagcctccctcata
cccgccagaacccgccagtcctggaagagagcgacctctacgaccgtcctggagatttgc
gggggtcaaggaggggcgctccgagcaggtggcgccaaacccactcctctggcctctggc
cagtaccgccagggagggactcaggagagcaagcggtttggagtctgggggtcaagagag
gggacctcagagaacacagaattacttgagggcgagggacactggccactgcctatcatg
tccctgaaggcctga

>gi568815586f:120625886_120839445|GENSCAN_predicted_peptide_2|289_aa
MVVQTSEEGLAADAELPGPLLMLAQNCAVMHNLLGPACIFLRKGFAENRQPAQGNWQLTN
LSFLQACSLEMSLPSVLTPRFRVALIAQETWALLEAGDMCFLDPGSSQKHWWPPGSYVVS
CDPMTGERTGMGVKLEKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMP
TEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGE
ISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR

>gi568815586f:120625886_120839445|GENSCAN_predicted_CDS_2|870_bp
atggtggtgcagacgagcgaggaggggctggcggctgacgccgagctcccgggaccgctc
ctgatgctggcccagaactgcgcagtcatgcacaacctgctgggccctgcctgcattttc
ctgcgcaagggcttcgctgagaacaggcagcctgcccagggcaactggcagctcaccaac
ctgagcttcctccaggcctgctccttggagatgtctctgccatctgttctgacgcctaga
ttcagggttgccttgattgcccaggagacctgggcactgcttgaggctggagacatgtgc
tttttggaccctggctccagccagaagcactggtggcccccggggtcctatgtggtgtcc
tgtgatcccatgacaggggaacgtacagggatgggggtcaaattggagaaggatagatca
ctgcgaccagaggaaattgaagagctccgagaggccttcagagaattcgacaaggacaag
gatggctacatcaactgccgggatctgggcaactgcatgcgcaccatgggctacatgccc
accgagatggagctcatcgaactgtcccagcagatcaacatgaacctgggtggccatgta
gattttgatgacttcgtggagctaatggggcctaaactcctggcagagacagcagatatg
attggtgtaaaggaactgcgagatgctttccgagagtttgacaccaatggtgatggggaa
ataagcaccagtgagctgcgagaggctatgaggaagctcctgggtcatcaggtgggacac
cgagacatagaggaaattatccgagatgtggacctcaatggggatggacgagtggacttt
gaagagtttgtccggatgatgtcccgctga

>gi568815586f:120625886_120839445|GENSCAN_predicted_peptide_3|351_aa
MLGAWAVEGTAVALLRLLLLLLPPAIRGPGLGVAGVAGAAGAGLPESVIWAVNAGGEAHV
DVHGIHFRKDPLEGRVGRGESPPAEPRDPGPAVLGAAGRGLRAPSPFRPWGRVSGAKFLS
AASSGARSELRAWHWLQASDYGMKLPILRSNPEDQILYQTERYNEETFGYEVPIKEEGDY
VLVLKFAEVYFAQSQQKVFDVRLNGHVVVKDLDIFDRVGHSTAHDEIIPMSIRKGKLSVQ
GEVSTFTGKLYIEFVKGYYDNPKVCALYIMAGTVDDVPKLQPHPGLEKKEEEEEEEEYDE
GSNLKKQTNKNRVQSGPRTPNPYASDNSSLMFPILVAFGVFIPTLFCLCRL

>gi568815586f:120625886_120839445|GENSCAN_predicted_CDS_3|1056_bp
atgctgggagcctgggcggttgagggaaccgctgtggcgctcctgcgactgctgctgctg
ctgctgccgccggcgatccggggacccgggctcggcgtggccggcgtggccggcgcggcg
ggggccgggctgcccgagagcgtcatttgggcggtcaacgcgggtggagaggcgcatgtg
gacgtgcacgggatccacttccgcaaggaccctttggaaggccgggtgggccgaggtgag
agtccccctgccgagccgcgggatccagggcctgctgtgctgggcgcagccggccggggg
ctgcgggccccgagcccctttcgaccctggggccgcgtctctggagcgaagtttctctct
gcagcttcttcgggggcccgctctgagctcagggcctggcactggctccaagcctcagac
tatggcatgaaactgccaatcctgcgttccaaccctgaggaccagatcctgtatcaaact
gagcggtacaatgaggagacctttggctacgaagtgcccatcaaagaggagggggactac
gtgctggtcttgaaatttgcagaggtctactttgcacagtcccagcaaaaggtatttgat
gtacgattgaatggccacgtcgtggtgaaggacttggatatctttgatcgtgttgggcat
agcacagctcacgatgaaattatacctatgagcatcagaaaggggaagctgagtgtccag
ggggaggtgtccaccttcacagggaaactctacattgagtttgtcaaggggtactatgac
aatcccaaggtctgtgcactctacatcatggctgggacagtggatgatgtaccaaagctt
cagcctcatccgggattggagaagaaagaagaggaagaagaagaagaagaatatgatgaa
gggtctaatctcaaaaaacagaccaataagaaccgggtgcagtcaggcccccgcacaccc
aacccctatgcctcggacaacagcagcctcatgtttcccatcctggtggccttcggagtc
ttcattccaaccctcttctgcctctgccggttgtga

>gi568815586f:120625886_120839445|GENSCAN_predicted_peptide_4|857_aa
MSGSNPKAAAAASAAGPGGLVAGKEEKKKAGGGVLNRLKARRQAPHHAADDGVGAAVTEQ
ELLALDTIRPEHVLRLSRVTENYLCKPEDNIYSIDFTRFKIRDLETGTVLFEIAKPCVSD
QEEDEEEGGGDVDISAGRFVRYQFTPAFLRLRTVGATVEFTVGDKPVSNFRMIERHYFRE
HLLKNFDFDFGFCIPSSRNTCEHIYEFPQLSEDVIRLMIENPYETRSDSFYFVDNKLIMH
NKADYAYNGGHTPEQRARSGRSRSLGLCLSPMAAALLARASGPARRALCPRAWRQLHTIY
QSVELPETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELG
GAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKI
GCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKG
ISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLD
MGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTW
RAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITE
IYEGTSEIQRLDQPPGRRKEGPRLPESGSKAVEASSPRWENTEPREAAIVLTSALGGGPG
QPVRGLALVLVPAGLSLGKGAPEAKVQALNPLGQCRSQQLEEKTGAVTGYVTICLGIKTP
SRHDSNRRCEEIQSLMAKAQTQKLEAHVVATLQQLQERALDFKGKAEEETDDGWSGKNFV
MGESLRMRQLESEPAEI

>gi568815586f:120625886_120839445|GENSCAN_predicted_CDS_4|2574_bp
atgagcgggtctaacccgaaggctgcggccgcggcgtcggcggctgggcccggggggctg
gtggctggcaaggaggagaagaagaaggcgggcggcggcgtcctgaaccgcctgaaggcg
cggcggcaggcgccccaccacgcggccgacgacggcgtcggggcagcggtcacggagcag
gagctgctggcgctggacaccatccggcccgagcacgtcctgcgcctcagccgggtcacc
gagaattatttatgtaaacccgaagacaacatctacagtattgatttcacccgcttcaaa
attcgagatttggagacagggacagtactttttgagattgccaaaccttgcgtttcagac
caggaggaggatgaggaggagggaggtggagacgtggacatcagcgcaggacgttttgtc
cgctatcagttcacaccggcatttctccgcctccggacagtcggggctacggtggagttc
acagtgggagacaaacctgtttcaaacttccggatgatcgaacggcactatttccgggaa
cacttgctgaaaaactttgactttgattttggcttctgcatccccagcagtaggaacact
tgtgaacatatctatgagtttccccagctttcggaggatgtcattcgtctaatgattgaa
aatccttacgagacccgctctgacagcttctactttgttgacaacaagctgataatgcac
aacaaggctgattatgcctataatggaggccacactccggaacagcgcgctcgcagcggg
aggtcgcgaagcctgggactgtgtctgtcgcccatggccgccgcgctgctcgcccgggcc
tcgggccctgcccgcagagctctctgtcctagggcctggcggcagttacacaccatctac
cagtctgtggaactgcccgagacacaccagatgttgctccagacatgccgggactttgcc
gagaaggagttgtttcccattgcagcccaggtggataaggaacatctcttcccagcggct
caggtgaagaagatgggcgggcttgggcttctggccatggacgtgcccgaggagcttggc
ggtgctggcctcgattacctggcctacgccatcgccatggaggagatcagccgtggctgc
gcctccaccggagtcatcatgagtgtcaacaactctctctacctggggcccatcttgaag
tttggctccaaggagcagaagcaggcgtgggtcacgcctttcaccagtggtgacaaaatt
ggctgctttgccctcagcgaaccagggaacggcagtgatgcaggagctgcgtccaccacc
gcccgggccgagggcgactcatgggttctgaatggaaccaaagcctggatcaccaatgcc
tgggaggcttcggctgccgtggtctttgccagcacggacagagccctgcaaaacaagggc
atcagtgccttcctggtccccatgccaacgcctgggctcacgttggggaagaaagaagac
aagctgggcatccggggctcatccacggccaacctcatctttgaggactgtcgcatcccc
aaggacagcatcctgggggagccagggatgggcttcaagatagccatgcaaaccctggac
atgggccgcatcggcatcgcctcccaggccctgggcattgcccagaccgccctcgattgt
gctgtgaactacgctgagaatcgcatggccttcggggcgcccctcaccaagctccaggtc
atccagttcaagttggcagacatggccctggccctggagagtgcccggctgctgacctgg
cgcgctgccatgctgaaggataacaagaagcctttcatcaaggaggcagccatggccaag
ctggccgcctcggaggccgcgaccgccatcagccaccaggccatccagatcctgggcggc
atgggctacgtgacagagatgccggcagagcggcactaccgcgacgcccgcatcactgag
atctacgagggcaccagcgaaatccagcggctggaccagcctccaggcaggaggaaggaa
ggccccagattgccagagtcggggagcaaagctgtggaggcctcgagccccaggtgggag
aacacagaacctcgagaagcagccattgtgctcactagcgcgctcgggggcggccctggc
cagccagtgcgggggcttgccctggtcctggtgcctgcagggctttctctgggcaaaggt
gcccctgaagccaaggtccaagctcttaaccctctgggccagtgtcgatctcagcagctg
gaagagaaaacaggagctgtcacaggatatgttactatctgcctggggataaaaacccca
tcaaggcacgacagcaaccgcaggtgtgaggaaattcaatctctaatggcaaaggctcaa
acacaaaagctagaagctcacgtggtggctacactccagcagctccaggaaagggctctg
gatttcaagggaaaggctgaggaggaaacagatgatggctggagcgggaagaattttgtg
atgggagagtctctgcgcatgagacagttggaatctgaacctgcagaaatttga

>gi568815586f:120625886_120839445|GENSCAN_predicted_peptide_5|331_aa
XAYSLVDSSQVSTFLISILLIVYGSFRSLNMDFENQDKEKDSNSSSGSFNGNSTNNNYQK
VELGIEAIVSLYPRSCRISFGCCGRFTAAELLSFSLSVMLVLIWVLTGHWLLMDALAMGL
CVAMIAFVRLPSLKVSCLLLSGLLIYDVFWVFFSAYIFNSNVMVKVATQPADNPLDVLSR
KLHLGPNVGRDVPRLSLPGKLVFPSSTGSHFSMLGIGDIVMPGLLLCFVLRYDNYKKQAS
GDSCGAPGPANISGRMQKVSYFHCTLIGYFVGLLTATVASRIHRAAQPALLYLVPFTLLP
LLTMAYLKGDLRRMWSEPFHSKSSSSRFLEV

>gi568815586f:120625886_120839445|GENSCAN_predicted_CDS_5|996_bp
nnggcctattccctggtggattccagtcaagtgtctacatttctgatttccattcttctt
atagtctatggtagtttcaggtcccttaatatggactttgaaaatcaagataaggagaaa
gacagtaatagttcttctgggtctttcaatggcaacagcaccaataataattaccagaag
gttgagcttggcatagaggccattgtcagcctctacccacgttcttgcaggatttccttt
ggttgctgtggacgtttcactgctgctgagttgctgtcattctctctgtctgtcatgctc
gtcctcatctgggttctcactggccattggcttctcatggatgcactggccatgggcctc
tgtgtcgccatgatcgcctttgtccgcctgccgagcctcaaggtctcctgcctgcttctc
tcagggcttctcatctatgatgtcttttgggtatttttctcagcctacatcttcaatagc
aacgtcatggtgaaggtggccactcagccggctgacaatccccttgacgttctatcccgg
aagctccacctggggcccaatgttgggcgtgatgttcctcgcctgtctctgcctggaaaa
ctggtcttcccaagctccactggcagccacttctccatgttgggcatcggagacatcgtt
atgcctggtctcctactatgctttgtccttcgctatgacaactacaaaaagcaagccagt
ggggactcctgtggggcccctggacctgccaacatctccgggcgcatgcagaaggtctcc
tactttcactgcaccctcatcggatactttgtaggcctgctcactgctactgtggcgtct
cgcattcaccgggccgcccagcccgcccttctctatttggtgccatttactttattgcca
ctcctcacgatggcctatttaaagggcgacctccggcggatgtggtctgagcctttccac
tccaagtccagcagctcccgattcctggaagtatga