Result of FASTA (omim) for pF1KB9903
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9903, 255 aa
  1>>>pF1KB9903 255 - 255 aa - 255 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.5692+/-0.000316; mu= 14.9241+/- 0.020
 mean_var=97.6232+/-20.314, 0's: 0 Z-trim(117.4): 91  B-trim: 241 in 1/52
 Lambda= 0.129807
 statistics sampled from 29249 (29348) to 29249 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.71), E-opt: 0.2 (0.344), width:  16
 Scan time:  4.940

The best scores are:                                      opt bits E(85289)
NP_003081 (OMIM: 603521) U2 small nuclear ribonucl ( 255) 1633 315.6 5.5e-86
XP_016869719 (OMIM: 605496) PREDICTED: centriolin  (1324)  204 48.6 6.5e-05
XP_016869718 (OMIM: 605496) PREDICTED: centriolin  (1458)  204 48.7   7e-05
XP_006717007 (OMIM: 605496) PREDICTED: centriolin  (1499)  204 48.7 7.1e-05
XP_011516474 (OMIM: 605496) PREDICTED: centriolin  (1700)  204 48.7 7.8e-05
XP_016869716 (OMIM: 605496) PREDICTED: centriolin  (1700)  204 48.7 7.8e-05
XP_016869713 (OMIM: 605496) PREDICTED: centriolin  (2240)  204 48.9 9.5e-05
XP_006717003 (OMIM: 605496) PREDICTED: centriolin  (2278)  204 48.9 9.7e-05
XP_011516472 (OMIM: 605496) PREDICTED: centriolin  (2281)  204 48.9 9.7e-05
XP_011516471 (OMIM: 605496) PREDICTED: centriolin  (2300)  204 48.9 9.7e-05
XP_016869712 (OMIM: 605496) PREDICTED: centriolin  (2302)  204 48.9 9.7e-05
XP_011516470 (OMIM: 605496) PREDICTED: centriolin  (2315)  204 48.9 9.8e-05
XP_005251736 (OMIM: 605496) PREDICTED: centriolin  (2325)  204 48.9 9.8e-05
NP_008949 (OMIM: 605496) centriolin isoform 1 [Hom (2325)  204 48.9 9.8e-05
XP_011516468 (OMIM: 605496) PREDICTED: centriolin  (2340)  204 48.9 9.9e-05
XP_011516469 (OMIM: 605496) PREDICTED: centriolin  (2340)  204 48.9 9.9e-05
NP_001267488 (OMIM: 609611) acidic leucine-rich nu ( 267)  189 45.2 0.00014
NP_112182 (OMIM: 609611) acidic leucine-rich nucle ( 268)  189 45.2 0.00014
NP_006296 (OMIM: 600832) acidic leucine-rich nucle ( 249)  187 44.8 0.00018
NP_001290330 (OMIM: 615864) centrosomal protein of ( 806)  180 44.0   0.001
NP_078824 (OMIM: 615864) centrosomal protein of 97 ( 865)  180 44.0  0.0011
NP_001308890 (OMIM: 614930,614935) protein tilB ho ( 446)  173 42.4  0.0017
NP_036604 (OMIM: 614930,614935) protein tilB homol ( 466)  173 42.4  0.0017
NP_653249 (OMIM: 616478) leucine-rich repeat and g ( 825)  176 43.2  0.0018
XP_011515252 (OMIM: 614930,614935) PREDICTED: prot ( 452)  172 42.2  0.0019
XP_016867238 (OMIM: 616478) PREDICTED: leucine-ric ( 962)  176 43.3   0.002
XP_006716601 (OMIM: 614930,614935) PREDICTED: prot ( 472)  172 42.2   0.002
NP_001129951 (OMIM: 609611) acidic leucine-rich nu ( 220)  165 40.6  0.0028
XP_005245571 (OMIM: 609611) PREDICTED: acidic leuc ( 253)  165 40.7  0.0031
XP_016857907 (OMIM: 609611) PREDICTED: acidic leuc ( 285)  165 40.7  0.0034
XP_005245570 (OMIM: 609611) PREDICTED: acidic leuc ( 286)  165 40.7  0.0034
XP_011511429 (OMIM: 615864) PREDICTED: centrosomal ( 749)  168 41.7  0.0046
XP_011521160 (OMIM: 613190,613193) PREDICTED: dyne ( 641)  167 41.4  0.0047
XP_011521159 (OMIM: 613190,613193) PREDICTED: dyne ( 643)  167 41.4  0.0047
XP_016878408 (OMIM: 613190,613193) PREDICTED: dyne ( 685)  167 41.5  0.0049
NP_848547 (OMIM: 613190,613193) dynein assembly fa ( 725)  167 41.5  0.0051
XP_006721192 (OMIM: 613190,613193) PREDICTED: dyne ( 727)  167 41.5  0.0052
XP_011521157 (OMIM: 613190,613193) PREDICTED: dyne ( 741)  167 41.5  0.0052
XP_011521156 (OMIM: 613190,613193) PREDICTED: dyne ( 743)  167 41.5  0.0052
XP_016878407 (OMIM: 613190,613193) PREDICTED: dyne ( 756)  167 41.5  0.0053
XP_011521155 (OMIM: 613190,613193) PREDICTED: dyne ( 772)  167 41.5  0.0054
XP_011509690 (OMIM: 602877) PREDICTED: protein pho ( 292)  159 39.6  0.0075
NP_001269342 (OMIM: 602877) protein phosphatase 1  ( 301)  159 39.6  0.0077
NP_001269338 (OMIM: 602877) protein phosphatase 1  ( 317)  159 39.6   0.008
NP_001269341 (OMIM: 602877) protein phosphatase 1  ( 344)  159 39.7  0.0085
NP_002703 (OMIM: 602877) protein phosphatase 1 reg ( 360)  159 39.7  0.0088


>>NP_003081 (OMIM: 603521) U2 small nuclear ribonucleopr  (255 aa)
 initn: 1633 init1: 1633 opt: 1633  Z-score: 1664.7  bits: 315.6 E(85289): 5.5e-86
Smith-Waterman score: 1633; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:1-255)

               10        20        30        40        50        60
pF1KB9 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 FNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTD
              190       200       210       220       230       240

              250     
pF1KB9 DGEEEMEEDTVTNGS
       :::::::::::::::
NP_003 DGEEEMEEDTVTNGS
              250     

>>XP_016869719 (OMIM: 605496) PREDICTED: centriolin isof  (1324 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 209.2  bits: 48.6 E(85289): 6.5e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_016 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_016 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_016 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_016 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_016869718 (OMIM: 605496) PREDICTED: centriolin isof  (1458 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 208.6  bits: 48.7 E(85289): 7e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_016 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_016 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_016 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_016 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_006717007 (OMIM: 605496) PREDICTED: centriolin isof  (1499 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 208.5  bits: 48.7 E(85289): 7.1e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_006 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_006 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_006 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_006 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_011516474 (OMIM: 605496) PREDICTED: centriolin isof  (1700 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 207.8  bits: 48.7 E(85289): 7.8e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_011 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_011 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_011 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_011 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_016869716 (OMIM: 605496) PREDICTED: centriolin isof  (1700 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 207.8  bits: 48.7 E(85289): 7.8e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_016 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_016 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_016 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_016 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_016869713 (OMIM: 605496) PREDICTED: centriolin isof  (2240 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 206.2  bits: 48.9 E(85289): 9.5e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_016 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_016 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_016 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_016 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_006717003 (OMIM: 605496) PREDICTED: centriolin isof  (2278 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 206.1  bits: 48.9 E(85289): 9.7e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_006 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_006 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_006 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_006 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_011516472 (OMIM: 605496) PREDICTED: centriolin isof  (2281 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 206.1  bits: 48.9 E(85289): 9.7e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_011 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_011 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_011 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_011 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   

>>XP_011516471 (OMIM: 605496) PREDICTED: centriolin isof  (2300 aa)
 initn: 179 init1:  86 opt: 204  Z-score: 206.1  bits: 48.9 E(85289): 9.7e-05
Smith-Waterman score: 204; 28.9% identity (61.6% similar) in 159 aa overlap (19-177:125-282)

                           10        20        30        40        
pF1KB9             MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAID
                                     :. . :.:    :  ::.:   : ..  ..
XP_011 DNLALIKSLNLSLSKDGGKKFKYIENLEKCVKLEVLNLSYNLIGKIEKLDKLL-KLRELN
          100       110       120       130       140        150   

       50        60        70        80        90       100        
pF1KB9 FSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDP
       .: :.: :..:.  .  :. : . .:.: .:   : . :  :  : : .:..  : :.. 
XP_011 LSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWLGKKLKSLRVLNLKGNKISSLQDISK
           160       170       180       190       200       210   

      110       120       130       140       150       160        
pF1KB9 LASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGA
       :  :..:  : ...:::..  ::  ..:... ... :. : :  ..:::: . :. ..  
XP_011 LKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLESLEGQPVTTQDRQEAFERFSLEEVE
           220       230       240       250       260       270   

      170       180       190       200       210       220        
pF1KB9 QLAKDIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQ
       .: .:. ..                                                   
XP_011 RLERDLEKKMIETEELKSKQTRFLEEIKNQDKLNKSLKEEAMLQKQSCEELKSDLNTKNE
           280       290       300       310       320       330   




255 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 14:46:46 2016 done: Sat Nov  5 14:46:47 2016
 Total Scan time:  4.940 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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