GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:23:28

Sequence gi568815596f:28293721_28512445 : 218725 bp : 48.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3155   3203   49  1  1   77   89    25 0.436   0.61
 1.02 Intr +   4618   4771  154  2  1  122  106    -5 0.505   3.83
 1.03 Intr +  27724  27905  182  1  2   45  103   102 0.047   6.91
 1.04 Intr +  33554  33727  174  0  0   78  111    27 0.419   3.91
 1.05 Intr +  38879  39030  152  0  2   84   82    73 0.659   6.18
 1.06 Term +  44730  45032  303  2  0  104   33   102 0.082   1.47
 1.07 PlyA +  45041  45046    6                               1.05

 2.04 PlyA -  47414  47409    6                               1.05
 2.03 Term -  50945  50636  310  1  1   99   34   139 0.702   4.13
 2.02 Intr -  53306  53118  189  1  0   85   58    55 0.499   0.90
 2.01 Init -  57420  57248  173  0  2   30   64   167 0.150   7.43
 2.00 Prom -  59965  59926   40                              -2.66

 3.00 Prom +  60502  60541   40                              -5.46
 3.01 Init +  64463  64489   27  1  0   73  101    29 0.296   2.58
 3.02 Intr +  66308  66362   55  1  1   82   69    23 0.158  -1.65
 3.03 Intr +  67890  67935   46  1  1  107   87    38 0.639   3.07
 3.04 Intr +  70368  70488  121  0  1   78   48   129 0.811   8.40
 3.05 Term +  75168  75239   72  2  0  106   55    63 0.905   2.71
 3.06 PlyA +  76324  76329    6                              -0.45

 4.00 Prom +  78097  78136   40                              -1.76
 4.01 Init +  80564  80646   83  1  2   60   92    48 0.511   2.84
 4.02 Intr +  80744  80819   76  2  1   94   55    28 0.843  -0.38
 4.03 Intr +  80948  81073  126  1  0  112   36    99 0.190   7.98
 4.04 Intr +  89187  89262   76  2  1   84   47    62 0.105   0.79
 4.05 Intr +  93106  93324  219  2  0  106   42    87 0.274   4.17
 4.06 Intr +  94873  95043  171  2  0   64   95    29 0.193   1.11
 4.07 Intr +  97625  97758  134  0  2   67   32    66 0.246  -0.74
 4.08 Intr + 100010 100102   93  1  0   44   96   153 0.275  11.86
 4.09 Intr + 110387 110638  252  1  0   96   92   257 0.964  24.53
 4.10 Intr + 115039 115146  108  0  0   97   77   263 0.999  26.58
 4.11 Term + 118210 118728  519  0  0  110   40   622 0.742  53.90
 4.12 PlyA + 123571 123576    6                               1.05

 5.00 Prom + 125457 125496   40                              -1.46
 5.01 Init + 131012 131083   72  1  0   79   23    84 0.106   2.16
 5.02 Intr + 134247 134414  168  2  0   75   32   111 0.145   4.34
 5.03 Intr + 160535 160595   61  1  1   95   70    45 0.006   1.71
 5.04 Term + 176182 176312  131  2  2   23   49   219 0.323   9.84
 5.05 PlyA + 177263 177268    6                              -1.75

 6.04 PlyA - 178414 178409    6                               1.05
 6.03 Term - 178959 178831  129  0  0   93   55    22 0.123  -2.42
 6.02 Intr - 180108 179984  125  1  2   39  113    95 0.140   7.40
 6.01 Init - 184455 184299  157  0  1   79   38    75 0.185   1.67
 6.00 Prom - 199933 199894   40                               1.34

 7.00 Prom + 201621 201660   40                              -4.46
 7.01 Init + 202395 202449   55  2  1   67  121   134 0.989  14.09
 7.02 Intr + 213324 213451  128  1  2   43   52    98 0.087   2.10
 7.03 Term + 215831 215869   39  1  0   91   39    67 0.126  -0.71
 7.04 PlyA + 216822 216827    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:28293721_28512445|GENSCAN_predicted_peptide_1|337_aa
MRFHHVGQAGLELLTSVDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDG
NEMAKRAKSMTQAKPKPKMITPDSRPENRNRVKSKQNEAVSPLAKPLVHTAQVLGKQQPL
MHARNSFHGDAKGAEMPAARGSKSWPLQLQKLAASCSSPRGTGQAPEGLLGGPQRERELL
SNFDHFEGELFEDQANQHPALGSRSHVIPKYPSRKSCSIIPGQALTKTAHHTQGVHLGLF
QNLCPSVPGGSICQWKALGNTSLERWPARLPVHMRVSTYSRFLEAAWNVFTAAFCSHSSF
CTPQAAPTAEIQLELAGGPWILEPFTSGYSLFLASIS

>gi568815596f:28293721_28512445|GENSCAN_predicted_CDS_1|1014_bp
atgaggtttcaccatgttggccaggctggtcttgaactcctgacctcagttgacctgcct
ctgtttttccctcgagaccagccaactctcacatttcagtccgtttatcactttaccaac
agtggacagctttactcccaggcccaaaaaaattatccgtacagccccagatgggatgga
aatgaaatggccaaaagagcaaaatctatgacccaggccaaacccaagccaaaaatgatc
acccctgattctaggccagaaaataggaatcgtgtgaaatctaagcagaatgaggctgtg
tcaccactagccaaacctcttgttcatactgcgcaggttttaggaaaacaacagccttta
atgcatgctcgaaattccttccatggggatgccaagggagcagagatgcctgcagcccgt
gggagcaagtcctggcctttgcagttgcaaaaactggctgcaagctgctccagccccaga
ggaactggccaagctccagagggcctccttggagggcctcagagggagagagaactgctc
agtaattttgatcactttgaaggagagctgtttgaggaccaggccaaccaacaccctgct
cttggcagccggagccatgtgattcctaaatacccttctaggaagagctgcagcatcatc
cctggtcaagccctgaccaaaactgcacaccacacacaaggagtacacctgggcttattt
caaaacctttgtccctcagttccaggaggcagcatttgccaatggaaagctctaggaaac
accagtcttgagaggtggccagccagactgcctgtccacatgcgtgtcagcacatacagc
cgcttcctggaagccgcctggaatgtcttcacggcagcgttttgctcacacagcagcttt
tgcacgccccaggcagccccgactgctgaaatccaacttgagctggctggtggtccctgg
atcctagagcccttcacttcgggttactccctctttcttgcctctatttcttag

>gi568815596f:28293721_28512445|GENSCAN_predicted_peptide_2|223_aa
METLYATKGIPSSGQAVPHRQTTQPNRAALQADGPWWADITLTGVDTLKAHLRLSGHGPI
LVKAFWLQDDPTPLPAASAGLATPPWVWDTPQGLWTTEDNTLSSPGNPASGFGLPVRAAH
MICPDTLLRLPAGVGSPSSLKGQRIEKAPCGNHLEQGLDCHAWCLRRERAAVTFNTHPPP
YFQMAPSTLLRTALLAPAQTAKSHRELQRSVLEQKRDHGVERD

>gi568815596f:28293721_28512445|GENSCAN_predicted_CDS_2|672_bp
atggaaaccttgtatgcaacaaaaggcatcccttcctctgggcaggcagtaccacatcgg
caaaccacacagcctaacagggcggccctgcaggccgacgggccctggtgggctgacatc
accctcaccggtgtggacactctgaaggcccacctgcgtctgagcggtcacgggcccatc
ttggtcaaggccttttggctccaggatgacccaacacctcttcctgcagcctctgcaggc
ctggccaccccaccctgggtgtgggacactcctcagggcctctggaccacagaagacaat
accctctccagccctggaaaccctgcttctggctttgggctgcctgtcagggcggctcac
atgatttgccctgatacattgcttcggctgcctgcaggggtgggctctcctagttctctg
aagggtcagaggatcgagaaggcgccgtgtgggaaccacctggaacagggcctggactgt
cacgcatggtgcttgagaagggagagggcagctgtcacctttaacacccacccaccacct
tatttccagatggcacccagcacccttctacgtactgctctactggcacctgcgcagaca
gccaaaagtcaccgggagctgcagcgttccgttttggagcaaaagcgagatcatggagtt
gaaagggactga

>gi568815596f:28293721_28512445|GENSCAN_predicted_peptide_3|106_aa
MVAVVIVPMPSVSSPAKLPAFEVRDYVSPAGAQLPNSDQKEELPYHRSPDCGHSLLPVSV
SPPNQRFTPLQLLIPGGPLTPSTLCDEAFLGQAPKFTPAFPAGSIP

>gi568815596f:28293721_28512445|GENSCAN_predicted_CDS_3|321_bp
atggtggcagtggtcatcgttcctatgccctcagtttcttcacctgccaaactccctgcc
ttcgaggtgagagattacgtaagtcccgctggggctcagctgcccaactctgatcagaaa
gaagagctgccttatcaccgctcacctgactgtggccacagtctcctccctgtcagcgtc
tccccgcccaatcaacgcttcacacctttgcagctgctgattcccggaggaccacttaca
ccaagcactctctgtgatgaggcgtttttaggacaagcccccaagttcaccccagctttt
cctgccggctccatcccttga

>gi568815596f:28293721_28512445|GENSCAN_predicted_peptide_4|618_aa
MAGRHRTNHKHQGILIVPRKQMHVFLKSCSRKDSLKGWAALGSPKARRDPTYKLPSFQCL
QCQLLLPNQTEDGLPGAHFLVQHEAEGRIRKAGHEGRGECGPQAAAHVLSDPQQLIHGVW
DPQNRKVAESCFKVGLEDAWQETRPDGGAVGKSFIAFRTSVSPLPYNVPNIQSSVLVVAD
VEAESGDVKGLGPGLWTKTATLAYSIVIDYKIHLAFRNVTISSKSMAYYKEMMAGSFRHD
GYRGQCIIKRYKETEDRSCVTVHSELSAMDSQHLLTLGPHKDPVGYRWLALLKNWDYPGN
FDTSSRGSSGSPAHAESYSSGGGGQQKFRVDMPGSGSAFIPTINAITTSQDLQWMVQPTV
ITSMSNPYPRSHPYSPLPGLASVPGHMALPRPGVIKTIGTTVGRRRRDEQLSPEEEEKRR
IRRERNKLAAAKCRNRRRELTEKLQAETEELEEEKSGLQKEIAELQKEKEKLEFMLVAHG
PVCKISPEERRSPPAPGLQPMRSGGGSVGAVVVKQEPLEEDSPSSSSAGLDKAQRSVIKP
ISIAGGFYGEEPLHTPIVVTSTPAVTPGTSNLVFTYPSVLEQESPASPSESCSKAHRRSS
SSGDQSSDSLNSPTLLAL

>gi568815596f:28293721_28512445|GENSCAN_predicted_CDS_4|1857_bp
atggcagggcgccatagaaccaaccacaagcaccaggggatcctgattgtgcccaggaag
caaatgcatgtcttcctgaaaagctgctcccgtaaagatagcttgaaaggctgggctgcc
cttggttcacccaaggctcgacgtgatcccacatacaagctgccctctttccagtgcctt
caatgccagcttctgctgcccaaccagactgaagatgggctgcccggtgcacacttcctg
gtgcagcacgaggcggagggaagaatcaggaaagcaggtcatgaggggcgtggggagtgt
gggccccaggcagcagcgcacgtgctcagtgacccacagcagctgatccatggggtgtgg
gatcctcagaacaggaaggtggcagaatcgtgtttcaaagtgggacttgaagatgcttgg
caggagactcgtccagatggaggggcagtggggaaaagctttattgcctttaggacttct
gtgtctcccttgccttacaacgtacccaacattcaatccagtgtcctggtggtggcagat
gtggaagccgagtctggagatgtcaaggggcttggcccaggtctttggacaaaaacggca
acacttgcatattcaatagtcatcgattataagatacatctggctttcagaaatgttaca
atatcatcaaaaagtatggcttactataaagaaatgatggcaggttcattcaggcatgat
ggatatagaggacagtgtatcattaagagatataaggaaactgaggacagaagttgtgtg
acggtgcacagcgagttgtcagcaatggactctcaacacctcttaacattgggtcctcat
aaggaccctgtggggtacagatggctggcgctacttaagaattgggattatcccgggaac
tttgacacctcgtcccggggcagcagcggctctcctgcgcacgccgagtcctactccagc
ggcggcggcggccagcagaaattccgggtagatatgcctggctcaggcagtgcattcatc
cccaccatcaacgccatcacgaccagccaggacctgcagtggatggtgcagcccacagtg
atcacctccatgtccaacccataccctcgctcgcacccctacagccccctgccgggcctg
gcctctgtccctggacacatggccctcccaagacctggcgtgatcaagaccattggcacc
accgtgggccgcaggaggagagatgagcagctgtctcctgaagaggaggagaagcgtcgc
atccggcgggagaggaacaagctggctgcagccaagtgccggaaccgacgccgggagctg
acagagaagctgcaggcggagacagaggagctggaggaggagaagtcaggcctgcagaag
gagattgctgagctgcagaaggagaaggagaagctggagttcatgttggtggctcacggc
ccagtgtgcaagattagccccgaggagcgccgatcgcccccagcccctgggctgcagccc
atgcgcagtgggggtggctcggtgggcgctgtagtggtgaaacaggagcccctggaagag
gacagcccctcgtcctcgtcggcggggctggacaaggcccagcgctctgtcatcaagccc
atcagcattgctgggggcttctacggtgaggagcccctgcacacccccatcgtggtgacc
tccacacctgctgtcactccgggcacctcgaacctcgtcttcacctatcctagcgtcctg
gagcaggagtcacccgcatctccctccgaatcctgctccaaggctcaccgcagaagcagt
agcagcggggaccaatcatcagactccttgaactcccccactctgctggctctgtaa

>gi568815596f:28293721_28512445|GENSCAN_predicted_peptide_5|143_aa
MATLDMGIGEWAPRVFTAYFLLRQVSLDNWTLAPAHARALQEHRKLLRHRTWMDDSLSFM
EQKKDASGSFCTKNEASKARPLLLRALAASVCTAGLGSVTEWEMYNFLKNGAKAGKSKKK
KRKKKKEEEEEKKEEEEGEGEVG

>gi568815596f:28293721_28512445|GENSCAN_predicted_CDS_5|432_bp
atggccaccctcgatatgggcattggtgagtgggctccccgggtattcacagcctacttc
ttgctgcggcaggtaagcttggacaactggacattggcccctgcgcatgccagggcactg
caagagcatcgcaagcttctcagacacaggacctggatggatgacagtctttccttcatg
gagcagaagaaggatgcctcaggaagcttctgcaccaagaatgaggcctcaaaagcaagg
cccctgctgctgagagctctggcagcctccgtgtgcacagcaggcctgggctcagtcaca
gaatgggaaatgtataatttcctgaaaaatggagctaaagcaggaaaatcgaagaagaag
aagaggaagaagaagaaggaggaggaggaggagaagaaagaggaggaggagggagaaggg
gaagtgggatga

>gi568815596f:28293721_28512445|GENSCAN_predicted_peptide_6|136_aa
MGHMVRISLKGSDQWAVGDIKECVRHPLKFEEHRNGLTDPPLKKPLCEREWLGVKLQTFA
VSVTALKAACLELFLPPSGFVVLLASGVKLQTFTAEGASSGLGHPRKGLSQCSGRLKGSS
SVARVGTKAKEAPRMS

>gi568815596f:28293721_28512445|GENSCAN_predicted_CDS_6|411_bp
atggggcacatggtgaggatttctctgaagggaagtgatcaatgggctgtaggggatatc
aaagaatgtgtcaggcatcccctgaaatttgaggaacacaggaacggattgaccgaccca
cccttgaaaaagcccctgtgtgagagggagtggctgggagtgaagctgcagacctttgcg
gtgagtgttacagctcttaaggcagcatgtctggagttgttccttcctcccagtggcttc
gtcgtcttgctggcttcaggagtgaagctgcagaccttcacggctgagggagccagctcc
ggcctcggccatcccaggaaggggctctcacagtgcagcggcaggctgaagggctcctca
agcgtggccagagtgggcaccaaggccaaggaggcaccaagaatgagctga

>gi568815596f:28293721_28512445|GENSCAN_predicted_peptide_7|73_aa
MGLRPGIFLLELLLLLGQALRNPRSRLKFWPMVAEVKLELLLIVEDISIGGVRALEPAIV
KTPVVTALSNLDD

>gi568815596f:28293721_28512445|GENSCAN_predicted_CDS_7|222_bp
atggggctgcggccaggcattttcctcctggagctgctgctgcttctggggcaagctttg
aggaatcccaggtcccgtttaaagttctggccaatggtggctgaggtgaagctagagctg
ctgctgattgtggaagatattagtataggaggagtcagggctctggaacctgccatcgtc
aagaccccagtggtcacagccctgtccaacttggatgactga