GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:17:58

Sequence gi568815588f:93658145_93897800 : 239656 bp : 40.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    757    864  108  1  0   84   53   119 0.539   6.48
 1.02 Intr +    960   1023   64  0  1   87  109    40 0.917   3.80
 1.03 Intr +   3915   3989   75  2  0  102   50    65 0.877   2.89
 1.04 Intr +   4416   4499   84  2  0   77  115    20 0.864   2.70
 1.05 Term +   4884   5039  156  2  0   55   37   156 0.283   4.15
 1.06 PlyA +   5906   5911    6                               1.05

 2.11 PlyA -   6480   6475    6                               1.05
 2.10 Term -  11724  11682   43  2  1   86   53    36 0.147  -4.45
 2.09 Intr -  12704  12626   79  0  1   50   98    86 0.195   3.49
 2.08 Intr -  18547  18509   39  2  0   91   83    37 0.181   0.78
 2.07 Intr -  27215  27102  114  0  0  107   97    16 0.418   3.90
 2.06 Intr -  31852  31692  161  0  2   95   47    44 0.411  -0.29
 2.05 Intr -  34585  34502   84  0  0   59   19   139 0.420   2.12
 2.04 Intr -  40252  40157   96  0  0   59   52   116 0.878   3.31
 2.03 Intr -  41962  41886   77  1  2   99  115   122 0.925  13.39
 2.02 Intr -  44433  44231  203  1  2  -41   61   306 0.844  13.08
 2.01 Init -  44652  44505  148  0  1   39   63   143 0.294   7.20
 2.00 Prom -  46582  46543   40                              -5.85

 3.00 Prom +  51409  51448   40                              -2.15
 3.01 Init +  53891  53993  103  1  1   53  115    44 0.637   4.05
 3.02 Intr +  62661  62841  181  1  1   19   40   138 0.108   0.10
 3.03 Intr +  69955  70068  114  1  0  129   83    18 0.135   4.04
 3.04 Intr +  77005  77170  166  1  1   39   92    56 0.070   0.14
 3.05 Term +  85454  85711  258  1  0   38   54   184 0.370   4.57
 3.06 PlyA +  85946  85951    6                               1.05

 4.07 PlyA -  86223  86218    6                               1.05
 4.06 Term -  89074  88922  153  1  0   16   55   159 0.773   2.34
 4.05 Intr -  91764  91663  102  0  0   76   78   130 0.881  10.25
 4.04 Intr -  99157  99054  104  2  2   97   40    79 0.048   2.97
 4.03 Intr -  99868  99804   65  0  2   93   48    51 0.184  -0.96
 4.02 Intr - 105032 104951   82  0  1  113   51    69 0.234   3.48
 4.01 Init - 108085 107998   88  1  1   68   95    19 0.502   1.45
 4.00 Prom - 109749 109710   40                              -6.85

 5.00 Prom + 118140 118179   40                              -4.25
 5.01 Init + 124660 124794  135  0  0   68   34    86 0.239   1.39
 5.02 Intr + 127825 127997  173  0  2   22   72   143 0.356   3.92
 5.03 Intr + 134599 134768  170  1  2   39   95   111 0.756   5.57
 5.04 Intr + 135042 135206  165  1  0   82   80    80 0.772   5.61
 5.05 Term + 138824 139659  836  0  2  110   53   406 0.988  31.46
 5.06 PlyA + 139989 139994    6                               1.05

 6.06 PlyA - 141564 141559    6                               1.05
 6.05 Term - 144071 143870  202  1  1   43   42   142 0.424   0.98
 6.04 Intr - 147800 147633  168  1  0   84   71   111 0.843   7.14
 6.03 Intr - 156807 156753   55  1  1   96   76    41 0.059   0.82
 6.02 Intr - 157902 157738  165  1  0   24   76   102 0.013   1.61
 6.01 Init - 175455 175152  304  0  1   57   19   242 0.249  11.68
 6.00 Prom - 180462 180423   40                              -6.95

 7.05 PlyA - 181632 181627    6                               1.05
 7.04 Term - 186990 186774  217  2  1   36   47   161 0.441   2.43
 7.03 Intr - 187508 187292  217  0  1   47   53   190 0.557   8.04
 7.02 Intr - 188133 188086   48  1  0   65  117    50 0.891   3.33
 7.01 Init - 190833 190716  118  0  1   60   77   112 0.972   7.71
 7.00 Prom - 200822 200783   40                              -4.05

 8.00 Prom + 212566 212605   40                              -3.45
 8.01 Init + 212682 212773   92  2  2   92  100   110 0.972  12.61
 8.02 Term + 217161 217260  100  0  1   52   38    85 0.512  -3.48
 8.03 PlyA + 219921 219926    6                               1.05

 9.00 Prom + 229054 229093   40                              -6.45
 9.01 Init + 235954 236067  114  0  0   74  100   146 0.906  12.66
 9.02 Term + 236379 236468   90  2  0   89   49    76 0.880   0.54
 9.03 PlyA + 236510 236515    6                              -0.45


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 200274 200420  147  2  0   82   33   142 0.989   5.02


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_1|162_aa
XKRTMFQKIVDACEQMQTEEEAIKYVTVDPTKKEIIMAMMMTACDLSAITKPWEVQSQVA
LMVANEFWEQGDLERTVLQQQPIPMMDRNKRDELPKLQVGFIDFVCTFVYKEFSRFHKEI
TPMLSGLQNNRVEWKSLADEYDAKMKVIEEEAKKQEGGAEKG

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_1|489_bp
nngaagaggaccatgtttcaaaaaattgttgatgcctgtgaacaaatgcaaacggaagaa
gaagccatcaaatatgtaactgttgatccaaccaagaaagagattatcatggcaatgatg
atgacggcatgtgacttgtctgctattaccaagccctgggaggtgcaaagtcaggtagca
cttatggttgcaaatgaattttgggaacaaggagatctggagagaacagtgttgcagcaa
caacccattcctatgatggacagaaacaaaagagatgaattacctaaacttcaagttgga
tttattgattttgtttgtacttttgtatataaggagttctcacggtttcacaaagaaatc
acacctatgctgagtggtcttcagaataacagagtagaatggaaatcactagctgatgag
tatgatgcaaagatgaaggtcattgaagaggaggcaaaaaagcaagaaggaggagccgaa
aaaggttag

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_2|347_aa
MPDSLEGKGRRPREKLGAATWRKLEASSSLSGPFLPLPLFPGAVLAVAQVGTRRERRVAG
GGGGGGGGGGCGEAVRQGARDLCCSGSLRPWVVAAAAGKEGNDDSGGELGTQGGRERMHG
HGGYDSDFSDDERCGESSKRKKRTVEDDLLLQKPFQKEKHGKVAHKQVAAELLDRENDKT
DLDVIRENHRFLWNEEDEMDMTCWINVSVRIRSSCKDREDSPKKTTGLNELESLFFLYIK
VQVDGHKVRILLVYCLRQFFCGNKYCDKKEGLKSWEVNFGYIEHGEKRNALVKLRHSSSK
KSEDSLLRNSDEEESASESELWKGPLPETDEKSQEEEFDEYFQDLFL

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_2|1044_bp
atgccggattccctagaggggaaaggaaggaggcccagggaaaaactgggagccgcgact
tggcgaaagctggaagcctcttcgtccctttccgggccgtttctcccgctgcccttgttt
cccggagctgttctggctgtagcacaagtcgggacccgtagggagaggcgggttgcgggc
ggcggcggcggcggcggcggcggtggtggttgtggcgaggctgtgcggcagggcgcacgg
gacctgtgctgcagcggctctctcaggccgtgggtcgtcgctgcagctgccgggaaagaa
ggaaacgacgactccgggggcgaacttggcacacagggaggaagggaaaggatgcatggt
catggaggctatgattctgattttagtgatgatgaacgctgtggagaatccagcaaaagg
aaaaaaaggacagttgaagatgacttactgctccaaaaaccatttcagaaagaaaaacat
ggaaaggtggcccataaacaagttgcagcagaattgctggatagggaaaatgacaagaca
gacttggatgttatacgagaaaatcatagattcctatggaatgaggaggacgaaatggac
atgacttgttggatcaatgtatcagttaggattaggtccagctgcaaggacagagaagac
tccccgaaaaaaaccactggcttaaatgagctggaaagtttatttttcttatacataaaa
gttcaagtcgatggtcataaagtcagaatccttcttgtttactgcttgcgtcaatttttc
tgtggaaataaatattgtgataaaaaagaaggcttaaagagttgggaagttaattttggt
tatattgagcatggtgagaagagaaatgcacttgttaaattaagacattcatcttcaaag
aaatctgaagattctctacttagaaactctgatgaggaagaaagtgcttcagaatctgaa
ctttggaagggtccactaccagagacagatgaaaaatcacaggaagaagaatttgatgag
tattttcaggatttgtttctatga

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_3|273_aa
MIHFPQDCAFSDGGLEAEVMTLSQMHLLGVRQAAGKAVDFGKKGVIFNFPDNFNRASLGN
FWKLKRKYVGKTLKQQAKVTSSSSEKPTAGGKIFGTVPTLGTTALIRSELLMSQHLWGAD
LPVYTHRATLCLSLMVTTMQKPVIDSLKIKSNKLKHTTRENLLTTKEDSKKRSKELQNNQ
KISNEMTIASTGVLNYYSPLTLKIKWSCGIDFQGSNIWKSHGDQVPGTASVVRMRISRTE
ESGGNQPPSYPKRLAAARWKKRGCRQLARDWDS

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_3|822_bp
atgattcatttccctcaggactgtgcctttagcgatggtggtttggaagcagaggttatg
acgctgtctcagatgcatctcttgggggttagacaggctgcaggaaaggccgttgatttt
gggaagaagggggtcatttttaactttccagataatttcaatagagcatccttgggaaat
ttctggaaattaaaaaggaaatacgtgggtaagacgctgaagcagcaggcgaaggtcaca
agttcaagttcagaaaaacccacagcaggaggaaagatttttgggactgtgcccaccctt
ggaacaactgcactaatcaggtctgagcttctgatgtcacagcacctgtggggtgccgac
cttccagtttacacacacagagccactttgtgcctaagcctcatggtaaccacaatgcaa
aaacctgtaatagattcactaaaaataaaaagcaacaaattaaaacatactaccagagaa
aatctcttaaccacaaaggaagacagtaagaaaagaagcaaggagttacaaaacaatcag
aaaataagcaacgaaatgacaatagcatccaccggggtcttgaactactatagccctctg
acccttaaaataaaatggtcctgtgggattgacttccagggcagtaacatctggaaaagc
catggagaccaagtcccaggtacagcgagtgttgtaagaatgaggatttcaaggactgag
gagagtggtggaaaccaaccaccaagctaccctaaacgcctggcagctgcaagatggaag
aaaagaggatgcaggcagctggctcgtgactgggattcatga

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_4|197_aa
MGLTIFFQSLLHERDTETSFYHQPPQGEPGSHESTESCVSGKAALMEMGQMGTESRQDLQ
LIRELLLAPAMHCSGEETLAPEAWKELPASRRRPALASWGFEKGLAQPRGCDMQRKNNVI
HDDDDNDNDDNNNNQPLTHPYNVPDPANSELSIAARDLWPVLHPLVSVGMMTQEAGNVTA
ENSKAMRKLVMTIGLVP

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_4|594_bp
atgggcctaacaatttttttccaatccttgctccatgagagggatactgaaacatcattt
tatcatcaaccaccacagggagagcctgggagtcatgaaagcacggagagctgtgtctca
ggaaaggcagcgctaatggagatgggtcagatgggaactgaaagcagacaagacctgcag
ctgattcgtgagcttctcctcgctccagcaatgcactgctcgggggaagagaccttagca
ccagaagcctggaaggaactccctgccagcaggaggcggccagctctagcttcctggggc
tttgaaaaaggcctggctcagccccgaggctgtgacatgcaaaggaaaaacaatgtaatt
catgatgatgatgacaatgacaatgacgacaacaacaataaccaacctttaacacatcct
tataatgtgccagaccctgcgaactcagagctttccattgctgcccgtgacttatggcct
gtgttacacccattggtttctgtaggaatgatgacccaagaagctgggaatgtgaccgca
gaaaatagcaaagcaatgaggaaactggttatgaccataggattagtgccctga

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_5|492_aa
MAVGDAFLAAEPGGTETNAVFEPVWSALERRLSSGFHSHNRRFSWPGALSSPPLQQISLK
PSDAHDDLWRQQALITAGFKLAQRTTAVASSLGCPVAPNLPKGDLRGNSFNCDCKLKWLV
EWLGHTNATVEDIYCEGPPEYKKRKINSLSSKDFDCIITEFAKSQDLPYQSLSIDTFSYL
NDEYVVIAQPFTGKCIFLEWDHVEKTFRNYDNITGTSTVVCKPIVIETQLYVIVAQLFGG
SHIYKRDSFANKFIKIQDIEILKIRKPNDIETFKIENNWYFVVADSSKAGFTTIYKWNGN
GFYSHQSLHAWYRDTDVEYLEIVRTPQTLRTPHLILSSSSQRPVIYQWNKATQLFTNQTD
IPNMEDVYAVKHFSVKGDVYICLTRFIGDSKVMKWGGSSFQDIQRMPSRGSMVFQPLQIN
NYQYAILGSDYSFTQVYNWDAEKAKFVKFQELNVQAPRSFTHVSINKRNFLFASSFKGNT
QIYKHVIVDLSA

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_5|1479_bp
atggctgtgggcgatgctttcttagcagcagagcccggtggcactgaaacaaacgcggtg
tttgagccagtctggtctgccttagagagaagactttccagtgggttccacagtcacaat
cggaggttttcttggcccggtgccctcagcagccctccgctgcagcaaatctccctgaag
ccctcagatgcccatgatgatttgtggaggcaacaggccctcatcacagctggctttaag
ctggcgcaaagaaccacagcggtggcttcaagcctcggctgccctgtagccccaaacctc
cctaaaggggacctgaggggtaattcatttaattgtgactgtaaactgaaatggctagtg
gaatggcttggccacaccaatgcaactgttgaagacatctactgcgaaggccccccagaa
tacaagaagcgcaaaatcaatagtctctcctcgaaggattttgattgcatcattacagaa
tttgcaaagtctcaagacctgccttatcaatcattgtccatagacactttttcttatttg
aatgatgagtatgtagtcatcgctcagccttttactggaaaatgcattttccttgaatgg
gaccatgtggaaaagaccttccggaattatgacaacattacaggcacatccactgtagta
tgcaagcctatagtcattgaaactcagctctatgttattgtggcccagctgtttggtggc
tctcacatctataagcgagacagttttgcaaataaattcataaaaatccaggatattgaa
attctcaaaatccgaaaacccaatgacattgaaacattcaagattgaaaacaactggtac
tttgttgttgctgacagttcaaaagctggttttactaccatttacaaatggaacggaaac
ggattctactcccatcaatccttacacgcgtggtacagggacactgatgtggaatatcta
gaaatagtcagaacacctcagacactcagaacgcctcatttaattctgtctagtagttcc
cagcgtcctgtaatttatcagtggaacaaagcaacacaattattcactaaccaaactgac
attcctaacatggaggatgtgtacgcagtgaagcacttctcagtgaaaggggacgtgtac
atttgcttgacaagattcattggtgattccaaagtcatgaaatggggaggctcctcgttc
caggatattcagaggatgccatcgcgaggatccatggtgttccagcctcttcaaataaat
aattaccaatatgcaattcttggaagtgattactcctttactcaagtgtataactgggat
gcagagaaagccaaatttgtgaaatttcaggaattaaatgttcaggcaccaagatcattc
acacatgtgtccattaataagcgtaattttctttttgcttccagttttaagggaaataca
cagatttacaaacatgtcatagttgacttaagcgcatga

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_6|297_aa
MHGKAWKSRQKAVAGVEPSWRTSTRAMQRGNGLEPSHRIPVGSLLSGAVRRGPPSSRPQN
GTSTSSLLPATGKAAGIQCKPLRAAMGQSLAEPRGQAAQGLASVTRPFDLGVPFAPSFSR
VPVLAPSLHCALPSSAVTMVTGGPVSVVPSSIACFRAPSGLFQNTNSDTLLRPNLGPQTS
SALTEKDVMGCKHFPPILISDYSSYTIMYRFYNSYQLSRMEWPKSQMQAPSSPVTITVVY
AVGISPRCLYWADVLILQLLWVSVNNSSYVYPSLEDYPLPTGSFSPGDAQKVLPHMP

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_6|894_bp
atgcatggaaaagcctggaagtccaggcagaaggctgttgcaggggtggagccctcatgg
agaacctctactagggcaatgcagaggggaaatggattggagccttcacacagaatccca
gttgggtcactgcttagtggagctgtgagaagagggccaccttcctccagaccccagaat
ggtacatccaccagcagcttgctccctgcaactggaaaagctgcaggaattcaatgcaag
cccttgagagcagctatggggcagagccttgcagagccacggggacaagctgctcaaggc
cttgcttctgtcactcgcccctttgacctgggggtccccttcgctcccagcttttcccgt
gtccctgtccttgctccctctctccactgtgcccttccttcttcagccgtcactatggtt
acagggggacctgtttctgtggtgccctcttccatagcctgcttccgagctccttctggt
ctctttcagaatacaaattctgacaccctcctacggcctaacctaggtccacagacatcc
tcagctctcacagagaaagatgtgatggggtgtaagcattttccacctatcctgatcagt
gattacagctcctatacaataatgtaccgcttctacaactcataccagcttagcagaatg
gagtggccaaaatcccagatgcaggctcccagctccccagtcaccatcactgtggtatat
gctgttggtatctcaccccgatgcctttactgggctgatgtcctcatcttgcagctgctg
tgggtgtcagttaataacagctcatatgtgtacccttctctggaggactatcctttacca
actggaagcttctctcctggagatgcccaaaaggttttgccccacatgccttag

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_7|199_aa
MRGSVLVLLLTAQNANHCDNESIAGEEDFNQVLQARMTGVDSWSRWRRSEAADLPARHKG
SPSPHQTQEPSWLHSVAPTLGLQVELPANPAPCACSSQPLGGRWDWAPWSRGGARRGGSG
RSGAYGGGKGLPQRSGRLKGSSSATKVGAQAEERVPRVSEGCKGCQHGVTSQSDGVGGTG
VSLGGLGGTGREGVGFESF

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_7|600_bp
atgaggggttcagtcctggtcctgctgctcactgcacagaatgccaatcactgtgacaat
gagtcaattgccggagaagaagactttaatcaggtgctgcaggctaggatgacaggagtg
gattcgtggtctcgctggcgaaggagtgaagctgcagaccttcccgctagacataaaggt
tctccaagtccccaccagactcaggagcccagctggcttcactcagtagctcccacactg
gggctgcaggtggagctgcctgccaatcccgcgccctgtgcctgcagttctcagcccttg
ggtggtcgatgggactgggcgccttggagcaggggcggtgctcgtcggggaggctcaggc
cgctcaggagcctacggcggcgggaaggggctcccacagcgcagcggcaggctgaagggc
tcttcaagtgccaccaaagtgggagcccaggcagaggagagagtgccgagagtgagtgag
ggctgcaagggctgccagcacggtgtcacctctcagagtgatggagtaggtggcactgga
gtatcccttggaggtctagggggtactggcagagaaggggttggatttgagagcttctga

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_8|63_aa
MVQDSKHLIEFLWVWYDVEHQESQAPKKVPGHWENKDEKLQEVETSKRDTYVNQKMRLSM
MVP

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_8|192_bp
atggtgcaggacagcaaacacctcatagagttcctgtgggtctggtatgatgtggagcac
caagaatcccaggctcctaagaaggtgcccgggcactgggaaaacaaagatgaaaagctt
caagaagttgaaactagcaagagagatacatatgttaaccaaaagatgcgcttaagcatg
atggtgccataa

>gi568815588f:93658145_93897800|GENSCAN_predicted_peptide_9|67_aa
MHPRAPLRSRRPPRQLGRQTAVGAGSAFPRRVAPAPSRVVGGGSAREAILQWGDVARKLT
LKSDPGG

>gi568815588f:93658145_93897800|GENSCAN_predicted_CDS_9|204_bp
atgcacccccgggcgccactgaggagccggcggccgccgaggcagctggggcgccagacc
gcggtaggtgctggctctgcctttcctcgccgtgttgctcccgcaccgagccgggtcgta
ggtggggggtcagcgagagaggccatcctgcagtggggcgacgttgcgaggaagctgacc
ctgaaaagtgatcccggtggttaa