GENSCAN 1.0	Date run:  6-Nov-116	Time: 00:53:23

Sequence gi568815592r:73495080_73753886 : 258807 bp : 42.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2657   2817  161  0  2   34  107   132 0.755   8.49
 1.02 Term +   5495   5656  162  1  0   61   33   180 0.997   6.75
 1.03 PlyA +   5938   5943    6                               1.05

 2.13 PlyA -   6866   6861    6                               1.05
 2.12 Term -  22855  22731  125  2  2   84   42   184 0.999  10.97
 2.11 Intr -  23185  22951  235  1  1   50   82   210 0.995  12.94
 2.10 Intr -  23531  23275  257  0  2   53   92   423 0.999  35.44
 2.09 Intr -  23769  23619  151  0  1   62  103   151 0.788  12.81
 2.08 Intr -  24149  23853  297  2  0   59  111   388 0.887  34.35
 2.07 Intr -  24437  24258  180  2  0   89   77   167 0.887  14.84
 2.06 Intr -  25386  25283  104  1  2  -40  100   165 0.011   3.87
 2.05 Intr -  25998  25921   78  1  0   21  111    76 0.009   1.80
 2.04 Intr -  26792  26583  210  0  0  -11   38   264 0.007   9.46
 2.03 Intr -  28795  28646  150  2  0   97   60   152 0.083  12.51
 2.02 Intr -  34069  33985   85  1  1   79   77    60 0.394   2.47
 2.01 Init -  49801  49733   69  1  0   71   80    43 0.050   2.90
 2.00 Prom -  58444  58405   40                              -6.35

 3.00 Prom +  63207  63246   40                              -7.25
 3.01 Init +  68621  68672   52  1  1   62   90    30 0.677  -0.02
 3.02 Intr +  74117  74339  223  0  1   92   41   185 0.711  10.46
 3.03 Intr +  75275  75344   70  2  1   35  108    28 0.727  -2.23
 3.04 Intr +  76616  76762  147  1  0   69  101   101 0.496   9.01
 3.05 Intr +  77908  78051  144  0  0   12   -9   184 0.063   0.66
 3.06 Intr +  80773  80912  140  0  2   71   93    87 0.233   5.84
 3.07 Term +  98166  98358  193  0  1   41   42   154 0.080   2.01
 3.08 PlyA +  98378  98383    6                               1.05

 4.10 PlyA -  98943  98938    6                               1.05
 4.09 Term -  99464  99336  129  2  0   77   50   130 0.662   5.30
 4.08 Intr - 105362 105272   91  1  1   67   95    47 0.679   2.38
 4.07 Intr - 115468 115321  148  2  1   62   69   104 0.291   4.27
 4.06 Intr - 126883 126725  159  2  0   75   94    57 0.277   4.04
 4.05 Intr - 143420 143333   88  2  1   73   94   -10 0.317  -3.28
 4.04 Intr - 146845 146612  234  1  0   86   76   191 0.998  14.66
 4.03 Intr - 149524 149328  197  2  2   82   90    87 0.873   6.51
 4.02 Intr - 158837 158714  124  2  1   88  119   168 0.009  19.14
 4.01 Init - 181404 181297  108  0  0   63   26   109 0.015   2.47
 4.00 Prom - 186408 186369   40                              -3.85

 5.00 Prom + 186830 186869   40                              -6.95
 5.01 Init + 201137 201210   74  1  2   85   57   221 0.999  17.29
 5.02 Intr + 202321 202493  173  1  2   41  116   155 0.985  12.26
 5.03 Intr + 214994 215400  407  0  2   61   49   155 0.023   2.04
 5.04 Intr + 215632 215812  181  0  1   55  -21   169 0.002   1.22
 5.05 Intr + 228172 228200   29  2  2  126   89     7 0.012   1.52
 5.06 Intr + 235265 235495  231  1  0  123  115   215 0.999  24.75
 5.07 Intr + 238457 238591  135  1  0   76   36   114 0.461   4.84
 5.08 Intr + 241304 241429  126  1  0   95   82    38 0.515   3.86
 5.09 Term + 247525 247641  117  0  0   63   48   111 0.370   2.16
 5.10 PlyA + 252783 252788    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  25591  25283  309  1  0   20  100   301 0.954  19.86
S.002 Init +  26118  26195   78  2  0   51   76   148 0.882  11.01
S.003 Term -  28795  28443  353  2  2   97   39   258 0.861  15.46
S.004 Init - 150252 150210   43  0  1   75   94    10 0.918   0.94
S.005 Term + 180585 180705  121  0  1   53   38   155 0.893   3.97
S.006 Term + 215632 215820  189  0  0   55   41   176 0.844   6.07
S.007 Init + 233058 233060    3  2  0   98   53     0 0.882  -2.45


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:73495080_73753886|GENSCAN_predicted_peptide_1|107_aa
XTYESVLFHQLQEIKGVQQDEALQLPKDLDYLTIRDVSLSHEVREKLHFSRPQTIGAASR
IPGVTPAAIINLLRFVKTTQRRQSAMNESSKTDQYLCDADRLQEREL

>gi568815592r:73495080_73753886|GENSCAN_predicted_CDS_1|324_bp
nccacttatgaatcagtgttgttccatcaactacaagaaataaagggagttcagcaagat
gaagctctccaactgccaaaagacctagattatttgactatcagggatgtgtctttgtcc
catgaagttcgagagaaactacattttagtcgtccacagacgatcggggctgctagtcgc
atacccggagtaacacctgccgccatcatcaatctgctgagatttgtgaagaccactcaa
cgaagacagtcggctatgaatgaatcatccaagactgatcaatacttatgtgatgcagac
agacttcaagagagagagttatag

>gi568815592r:73495080_73753886|GENSCAN_predicted_peptide_2|646_aa
MKMREDEEKERRRGRRKKKGESQTRDLKLKQTKHLAQSHMFSKWWTRDLDPGPSFRSQKA
EEKLPQGGASGRADPGDLTLRRLERRIHTTQLFAAGTRRPAAWTSGVPGGDDVLRASIKA
AGFEWKEPRGQHRSGFVAFTAIEPNLSQVREPLRRPPVPTLRPKPLGVPGPGWGRTVYKC
SSRRERSFSQRVCRQNTGWPGRHQLRERKDGRFPALLQGAQNGGRGARESGRMGKGSFKY
AWVLDKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV
AAGVGEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVST
YIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCIL
PPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHH
EALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAG
YAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFS
DYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGAGKVTKSAQKAQKAK

>gi568815592r:73495080_73753886|GENSCAN_predicted_CDS_2|1941_bp
atgaagatgagagaagacgaggaaaaagaaagaaggagggggaggagaaagaagaaagga
gaaagccagacacgggatctgaagcttaaacagaccaaacaccttgcccagagccacatg
ttcagcaagtggtggacgcgagacttggatccaggcccttccttccgcagtcagaaggcg
gaagaaaagttacctcaaggtggggcgagtggcagggcggaccctggcgacctgacgctg
cggaggctcgagcggcgtatccataccacccagctgttcgccgcgggaacccgccggccc
gcagcctggacatctggagtaccagggggagatgacgtgttacgggcttccataaaagca
gctggctttgaatggaaggagccaagaggccagcacaggagcggattcgtcgctttcacg
gccatcgagccgaacctctcgcaagtccgtgagccgttaaggaggcccccagtcccgacc
cttcgccccaagcccctcggggtccccgggcctgggtgggggagaaccgtatataagtgc
agtagtcgccgtgaacgttctttttcgcaacgggtttgccgccagaacacaggctggccc
ggtcggcaccagttgcgtgagcggaaagatggccgcttcccggccctgctgcagggagct
caaaatggaggacgcggcgctcgggagagcgggcggatgggaaagggctccttcaagtat
gcctgggtcttggataaactgaaagctgagcgtgaacgtggtatcaccattgatatctcc
ttgtggaaatttgagaccagcaagtactatgtgactatcattgatgccccaggacacaga
gactttatcaaaaacatgattacagggacatctcaggctgactgtgctgtcctgattgtt
gctgctggtgttggtgaatttgaagctggtatctccaagaatgggcagacccgagagcat
gcccttctggcttacacactgggtgtgaaacaactaattgtcggtgttaacaaaatggat
tccactgagccaccctacagccagaagagatatgaggaaattgttaaggaagtcagcact
tacattaagaaaattggctacaaccccgacacagtagcatttgtgccaatttctggttgg
aatggtgacaacatgctggagccaagtgctaacatgccttggttcaagggatggaaagtc
acccgtaaggatggcaatgccagtggaaccacgctgcttgaggctctggactgcatccta
ccaccaactcgtccaactgacaagcccttgcgcctgcctctccaggatgtctacaaaatt
ggtggtattggtactgttcctgttggccgagtggagactggtgttctcaaacccggtatg
gtggtcacctttgctccagtcaacgttacaacggaagtaaaatctgtcgaaatgcaccat
gaagctttgagtgaagctcttcctggggacaatgtgggcttcaatgtcaagaatgtgtct
gtcaaggatgttcgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaa
gcagctggcttcactgctcaggtgattatcctgaaccatccaggccaaataagcgccggc
tatgcccctgtattggattgccacacggctcacattgcatgcaagtttgctgagctgaag
gaaaagattgatcgccgttctggtaaaaagctggaagatggccctaaattcttgaagtct
ggtgatgctgccattgttgatatggttcctggcaagcccatgtgtgttgagagcttctca
gactatccacctttgggtcgctttgctgttcgtgatatgagacagacagttgcggtgggt
gtcatcaaagcagtggacaagaaggctgctggagctggcaaggtcaccaagtctgcccag
aaagctcagaaggctaaatga

>gi568815592r:73495080_73753886|GENSCAN_predicted_peptide_3|322_aa
MLGAVAHASDPSTLGGRVFSGKTCGNRAVWEPNSRIWARDDEEAGFQLRQSFIIVKITTA
ALILLQTPEAHSSRDSEGPRTVAWKPSCVWHTCQHCAGQVLEVCFCEPGTRGTEQVRGLT
GSEVKLQTFTVSVTALKVAHLELFVPPGGLVILLASGVKLQTFACSAGLKDSSSAAKVGA
QAEEAPRASEGCEDCQHAVTSQADIGSCEDPPDTVMIALTAQIVEHVCLNNMKSEHLEKE
QDNSNVQGTREITLNSDRWRPKFLGFVVAEMCVEKTMARAGCRKDVKESLWTLGNITELS
DPKINSQRFILMIYKRNIAIAI

>gi568815592r:73495080_73753886|GENSCAN_predicted_CDS_3|969_bp
atgctgggcgcagtggctcacgcctctgatcccagcactttgggaggccgagtgttctct
ggaaaaacttgtgggaacagagcagtctgggaaccgaacagcaggatttgggcaagggat
gatgaggaagcaggctttcaactgaggcagtcgttcatcattgtaaaaattactaccgct
gcactgatcttgctccaaactccagaggcacatagctccagggactcagaagggccaaga
accgtagcatggaagcccagctgtgtttggcacacttgtcagcattgtgcaggacaggta
cttgaggtctgtttttgtgaaccagggacccgaggcacagagcaagttcgtggtctcact
ggctcagaagtgaagctgcagaccttcacggtgagtgttacagctcttaaggtggcgcat
ctggagttgttcgttcctcctggtgggctcgtgatcttgctggcttcaggagtgaagctg
cagaccttcgcgtgcagcgctgggctgaaggactcctcaagtgccgccaaagtgggagcc
caggcagaggaggcgccgagagcgagcgagggctgtgaggactgccagcacgctgtcacc
tctcaagctgacatcggcagctgtgaggacccacctgacactgtgatgattgcgttaact
gcacaaattgtagagcatgtgtgtttgaacaatatgaaatctgagcaccttgaaaaagaa
caggataatagcaatgttcagggaacaagagagataaccttaaactctgaccgctggagg
cccaagttcctcggctttgtggtagcagaaatgtgtgtagagaagacgatggctcgagca
ggatgcagaaaagatgtcaaagagtcactgtggacactaggaaacatcacagaactgtca
gatccaaaaatcaattcacaaaggtttattttgatgatttataaaagaaacattgccata
gcaatttaa

>gi568815592r:73495080_73753886|GENSCAN_predicted_peptide_4|425_aa
MKDKSWGGRREGRRESGKIQEPEAVAQPDNNVTPMEVASTPAHVGVMRSPVRDLARNDGE
ESTDRTPLLPGAPRAEAAPVCCSARYNLAILAFFGFFIVYALRVNLSVALVDMVDSNTTL
EDNRTSKACPEHSAPIKVHHNQTGKKYQWDAETQGWILGSFFYGYIITQIPGGYVASKIG
GKMLLGFGILGTAVLTLFTPIAADLGVGPLIVLRALEGLGEGVTFPAMHAMWSSWAPPLE
RSKLLSISYAAFFTEVSAVGTHFKIPATLGYRSCTLFLQLDFLYFIDIIAYLYEGDPKVQ
CSRGMIGPAVFLVAAGFIGCDYSLAVAFLTISTTLGGFCSSGFSINHLDIAPSYAGILLG
ITNTFATIPGMVGPVIAKSLTPDGQSAQRLSEAASKPRASVDSSAGAFPLRGYQCVDKAL
SRQEQ

>gi568815592r:73495080_73753886|GENSCAN_predicted_CDS_4|1278_bp
atgaaagacaagagctggggtggaaggagagagggaaggagagagtctgggaagattcaa
gaaccagaggcagtagctcaaccagacaacaacgtcactcccatggaggtggcgagtaca
cctgctcacgtaggcgtcatgaggtctccggttcgagacctggcccggaacgatggcgag
gagagcacggaccgcacgcctcttctaccgggcgccccacgggccgaagccgctccagtg
tgctgctctgctcgttacaacttagcaattttggccttttttggtttcttcattgtgtat
gcattacgtgtgaatctgagtgttgcgttagtggatatggtagattcaaatacaacttta
gaagataatagaacttccaaggcgtgtccagagcattctgctcccataaaagttcatcat
aatcaaacgggtaagaagtaccaatgggatgcagaaactcaaggatggattctcggttcc
tttttttatggctacatcatcacacagattcctggaggatatgttgccagcaaaataggg
gggaaaatgctgctaggatttgggatccttggcactgctgtcctcaccctgttcactccc
attgctgcagatttaggagttggaccactcattgtactcagagcactagaaggactagga
gagggtgttacatttccagccatgcatgccatgtggtcttcttgggctccccctcttgaa
agaagcaaacttcttagcatttcatatgcagctttcttcacagaagtcagtgccgtgggt
acccattttaaaatccctgccactttgggctatcgtagttgcacacttttcttacaactg
gactttttatactttattgacattattgcctacttatatgaaggagatcctaaggttcaa
tgttcaagaggaatgattggacctgcagtattcctggtagctgctggcttcattggctgt
gattattctttggccgttgctttcctaactatatcaacaacactgggaggcttttgctct
tctggatttagcatcaaccatctggatattgctccttcgtatgctggtatcctcctgggc
atcacaaatacatttgccactattccaggaatggttgggcccgtcattgctaaaagtctg
acccctgatggtcagagtgcccagcgtttatcagaggcagcatccaagcccagagccagt
gtcgactcttcggctggtgcctttcctctgaggggctatcaatgtgtagataaagccctg
agtaggcaagagcagtga

>gi568815592r:73495080_73753886|GENSCAN_predicted_peptide_5|490_aa
MQGPPLLTAAHLLCVCTAALAVAPGPRFLVTAPGIIRPGGNVTIGVELLEHCPSQVTVKA
ELLKTASNLTVSVLEAEGVFEKVLEVLARAIRQEKEIKGIQLGKEEVKLSLFVDDMIVYL
ENPIVSAQNLLKLISNFSKVSGYKINVQKSPAFLYTNNRQTESQIMSELPFTIASKRIKY
LGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVDLHPYPLSLEEEENLPKESHR
GRQNFCKGPDVKHVGFANLQVFITAAQLCLYSSEAAVDGSFKTLTLPSLPLNSADEIYEL
RVTGRTQDEILFSNSTRLSFETKRISVFIQTDKALYKPKQEVKFRIVTLFSDFKPYKTSL
NILIKPIWPDTMELSASDTAMAAGMAGFCSDLSIQKLLVLVRVNDLVGEQDPKSNLIQQW
LSQQSDLGVISKTFQLSSHPILGDWSIQVQVNSPKEEPESLRDSWSFDDGSPVLSFLIVR
WKSLLLSRVA

>gi568815592r:73495080_73753886|GENSCAN_predicted_CDS_5|1473_bp
atgcagggcccaccgctcctgaccgccgcccacctcctctgcgtgtgcaccgccgcgctg
gccgtggctcccgggcctcggtttctggtgacagccccagggatcatcaggcccggagga
aatgtgactattggggtggagcttctggaacactgcccttcacaggtgactgtgaaggcg
gagctgctcaagacagcatcaaacctcactgtctctgtcctggaagcagaaggagtcttt
gaaaaagtgttggaggttctggctagggcaatcaggcaggagaaagaaataaaaggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgtagatgacatgattgtatatcta
gaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtgcaaaaatcaccagcattcttatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaacgaaataaaggaggacacaaacaaatggaagaacattccatgctcatgggtagat
cttcacccttatcccttatcccttgaggaagaagaaaatctccctaaagagagccacagg
ggtcggcaaaatttctgtaaagggccagatgttaagcatgtaggttttgccaaccttcag
gtctttattacagctgctcaactctgcctttatagctcggaagcagctgtagacggctct
tttaagacacttactcttccatcactacctctgaacagtgcagatgagatttatgagcta
cgtgtaaccggacgtacccaggatgagattttattctctaatagtacccgcttatcattt
gagaccaagagaatatctgtcttcattcaaacagacaaggccttatacaagccaaagcaa
gaagtgaagtttcgcattgttacactcttctcagattttaagccttacaaaacctcttta
aacattctcattaagccaatttggcctgacacaatggaattgagtgcctctgacactgcg
atggcagctggcatggctggcttctgctctgacctctccatccagaagttgttggtgcta
gtacgggtgaatgatcttgtaggggaacaggaccccaaatcaaatttgatccaacagtgg
ttgtcacaacaaagtgatcttggagtcatttccaaaacttttcagctatcttcccatcca
atacttggtgactggtctattcaagttcaagtgaatagcccgaaagaagagcctgagtca
ctgagagattcctggtcatttgatgacggcagccctgtgctgtctttcctcattgtcaga
tggaagtctcttcttctttctagagtggcttag