GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:43:32

Sequence gi568815586r:53565317_53772614 : 207298 bp : 45.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    751    746    6                               1.05
 1.02 Term -   5023   5004   20  2  2  126   49     6 0.078  -1.02
 1.01 Init -   9114   9018   97  0  1  103   40    52 0.062   2.37
 1.00 Prom -  26101  26062   40                              -1.36

 2.03 PlyA -  26130  26125    6                               1.05
 2.02 Term -  36067  36023   45  1  0   95   49    88 0.696   2.81
 2.01 Init -  37231  37124  108  1  0   73   79    12 0.408  -0.98
 2.00 Prom -  41731  41692   40                              -2.46

 3.02 PlyA -  45473  45468    6                               1.05
 3.01 Sngl -  67839  67462  378  0  0   79   44   340 0.999  24.86
 3.00 Prom -  87323  87284   40                              -3.26

 4.08 PlyA -  87881  87876    6                               1.05
 4.07 Term - 100112  99998  115  1  1   95   49   143 0.991   9.14
 4.06 Intr - 104025 103832  194  0  2   96  110    97 0.808  10.99
 4.05 Intr - 104632 104555   78  1  0   99   67    23 0.527   1.05
 4.04 Intr - 107315 107260   56  0  2   74   97    42 0.184   2.40
 4.03 Intr - 110925 110813  113  2  2   44   14   120 0.115   0.22
 4.02 Intr - 133023 132717  307  1  1   27  -82   629 0.129  35.31
 4.01 Init - 137123 137036   88  2  1   88   92    17 0.598   2.99
 4.00 Prom - 144774 144735   40                              -6.66

 5.15 PlyA - 145866 145861    6                               1.05
 5.14 Term - 146805 146628  178  2  1  103   39   130 0.971   6.76
 5.13 Intr - 147890 147784  107  2  2   59  109   123 0.915  10.51
 5.12 Intr - 148584 148385  200  1  2  109   97    88 0.883  10.87
 5.11 Intr - 149377 149245  133  1  1   76   94   183 0.637  17.92
 5.10 Intr - 150009 149884  126  0  0   87   81   148 0.999  14.88
 5.09 Intr - 150731 150477  255  2  0   30   65   212 0.938  10.74
 5.08 Intr - 151099 150944  156  1  0  101   89   169 0.998  18.51
 5.07 Intr - 154513 154423   91  0  1   67   94   110 0.999   9.50
 5.06 Intr - 156299 156151  149  2  2   24   94   229 0.995  16.13
 5.05 Intr - 156867 156709  159  0  0   95   81   213 0.998  21.48
 5.04 Intr - 158467 158277  191  2  2   72   94   263 0.985  24.60
 5.03 Intr - 159431 159329  103  2  1   96   82    51 0.706   5.05
 5.02 Intr - 159950 159771  180  2  0   72   65   154 0.837  11.56
 5.01 Init - 160155 160030  126  0  0   83   68    62 0.495   3.86
 5.00 Prom - 162687 162648   40                              -5.86

 6.06 PlyA - 163094 163089    6                               1.05
 6.05 Term - 174592 174386  207  1  0  118   48   155 0.939  11.84
 6.04 Intr - 175216 175172   45  1  0   87   88    52 0.793   3.71
 6.03 Intr - 178528 178432   97  0  1  103   11   115 0.710   5.31
 6.02 Intr - 179361 179270   92  0  2   50   53    79 0.127  -0.61
 6.01 Intr - 185696 185456  241  1  1  143   37    55 0.040   3.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:53565317_53772614|GENSCAN_predicted_peptide_1|38_aa
MEKESLWKADVYQFIIKDIMKDTDENQIRRCIGCCNVI

>gi568815586r:53565317_53772614|GENSCAN_predicted_CDS_1|117_bp
atggagaaagaaagcctgtggaaagctgatgtttaccagtttattataaaggatattatg
aaggatacggatgaaaaccagataaggagatgcattggctgttgtaatgtgatatga

>gi568815586r:53565317_53772614|GENSCAN_predicted_peptide_2|50_aa
MTKKPLLFYGAPHNFKHRLVVELLIRQREILVSNPTKYGFRIERSVNLLT

>gi568815586r:53565317_53772614|GENSCAN_predicted_CDS_2|153_bp
atgaccaagaaaccccttctattttatggggcaccccacaattttaaacaccgattagtt
gtggaattactgattagacaacgagaaatactggtttctaaccccacaaaatatggcttc
cgcatcgagcgttcagtgaatttattgacataa

>gi568815586r:53565317_53772614|GENSCAN_predicted_peptide_3|125_aa
MARKEGWREEKGLFCHQQGGDREYTVNLHRCIHGVGFKKRSPWACKEIWKFAMKEMGTPD
VRIDTRLNKAVWAKGIRNVQDLIRMRLSRKHNEDEDSPNKLYTLVTNVPVTAFKNLQAMW
MRTNC

>gi568815586r:53565317_53772614|GENSCAN_predicted_CDS_3|378_bp
atggcccgcaaagaagggtggcgagaagaaaaagggctgttctgtcatcaacaaggtggt
gaccgagaatacaccgtcaaccttcacaggtgcatccacggagtgggcttcaagaagcgt
tccccttgggcatgcaaagagatctggaaatttgccatgaaggagatgggaactccagat
gtgcgcattgatactagactcaacaaagctgtctgggccaaaggaataaggaatgtccaa
gaccttatccgtatgcggttgtccagaaaacataatgaggatgaagattcaccaaataag
ctctatactttggttaccaatgtacccgttaccgctttcaaaaatctacaggcaatgtgg
atgagaactaactgctga

>gi568815586r:53565317_53772614|GENSCAN_predicted_peptide_4|316_aa
MRELQGLEGPKILRQMLTWTLRQERMVKTDWATERDSISKKKKEEEEKRKKKKEKKKKMR
RRRRKKKKEKKKKKKKKKKKKKKKKKKKKKKKEEEQEQEQEQEEQEEQEEEQEEDNRDED
RGLQPSSGIWRQWSNRPDTATALAGGAVMPELILYVAITLSVAERLVGPAPHPLKMFACS
KFVSTPSLVKSTSQLLSRPLSAVVLKRPEILTDESLSSLAVSCPLTSLVSSRSFQTSAIS
RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA
MGLFCLMVAFLILFAM

>gi568815586r:53565317_53772614|GENSCAN_predicted_CDS_4|951_bp
atgagggagctacagggccttgagggtccgaagatcctgagacagatgcttacatggacg
ttgagacaggaaagaatggtcaagacagactgggcgacagagcgagactccatctcaaaa
aaaaagaaggaggaggaggagaagaggaagaagaagaaggagaagaagaagaagatgagg
aggaggaggaggaagaagaagaaggagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaaggaagaagaacaagaacaagaacaa
gaacaagaagaacaagaagaacaagaagaagaacaagaagaagacaacagagatgaggac
aggggactccaaccatcctcgggcatctggaggcagtggagcaaccggccggataccgcc
acagccctggcaggcggcgctgtgatgcctgagctgatcctgtatgttgcaatcactcta
tccgtggctgagcgactcgttggcccggctcctcaccccctgaaaatgttcgcctgctcc
aagtttgtctccactccctccttggtcaagagcacctcacagctgctgagccgtccgcta
tctgcagtggtgctgaaacgaccggagatactgacagatgagagcctcagcagcttggca
gtctcatgtccccttacctcacttgtctctagccgcagcttccaaaccagcgccatttca
agggacatcgacacagcagccaagttcattggagctggggctgccacagttggggtggct
ggttctggggctgggattggaactgtgtttgggagcctcatcattggttatgccaggaac
ccttctctgaagcaacagctcttctcctacgccattctgggctttgccctctcggaggcc
atggggctcttttgtctgatggtagcctttctcatcctctttgccatgtga

>gi568815586r:53565317_53772614|GENSCAN_predicted_peptide_5|717_aa
MGTDLEGQTYVLETKSDTSKMSRNPQGLETRYALSPGVVAGAEDRYLKARMEESPLSRAP
SRGGVNFLNVARTYIPNTKVECHYTLPPGTMPSASDWIGIFKVEAACVRDYHTFVWSSVP
ESTTDGSPIHTSVQFQASYLPKPGAQLYQFRYVNRQGQVCGQSPPFQFREPRPMDELVTL
EEADGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEGQVTELRSRVQELERALAT
ARQEHTELMEQYKGISRSHGEITEERDILSRQQGDHVARILELEDDIQTISEKVLTKEVE
LDRLRDTVKALTREQEKLLGQLKEVQADKEQSEAELQVAQQENHHLNLDLKEAKSWQEEQ
SAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGAQELAASSQQKATLLGEELASAA
AARDRTIAELHRSRLEVAEVNGRLAELGLHLKEEKCQWSKERAGLLQSVEAEKDKILKLS
AEILRLEKAVQEERTQNQVFKTELAREKDSSLVQLSESKRELTELRSALRVLQKEKEQLQ
EEKQVSTHNPGPVDATGCPAALTDSEDESPEDMRLPPYGLCERGDPGSSPAGPREASPLV
VISQPAPISPHLSGPAEDSSSDSEAEDEKSVLMAAVQSGGEEANLLLPELGSAFYDMASG
FTVGTLSETSTGGPATPTWKECPICKERFPAESDKDALEDHMDGHFFFSTQDPFTFE

>gi568815586r:53565317_53772614|GENSCAN_predicted_CDS_5|2154_bp
atggggacggacttggaaggccagacctacgtcctagagactaagagtgatacctcaaaa
atgtcccgtaaccctcagggactagaaaccaggtatgccttatctccaggtgtagtggca
ggggctgaggacagatatctcaaggccaggatggaagaatcaccactaagccgggcacca
tcccgtggtggagtcaactttctcaatgtagcccggacctacatccccaacaccaaggtg
gaatgtcactacacccttcccccaggcaccatgcccagtgccagtgactggattggcatc
ttcaaggtggaggctgcctgtgttcgggattaccacacatttgtgtggtcttccgtgcct
gaaagtacaactgatggttcccccattcacaccagtgtccagttccaagccagctacctg
cccaaaccaggagctcagctctaccagttccgatatgtgaaccgccagggccaggtgtgt
gggcagagcccccctttccagttccgagagccaaggcccatggatgaactggtgaccctg
gaggaggctgatgggggctctgacatcctgctggttgtccccaaggcaactgtgttacag
aaccagctcgatgagagccagcaagaacggaatgacctgatgcagctgaagctacagctg
gagggacaggtgacagagctgaggagccgagtgcaggagctcgagagggctctggcaact
gccaggcaggagcacacggagctgatggaacagtacaaggggatttcccggtcccatggg
gagatcacagaagagagggacatcctgagccggcaacagggagaccatgtggcacgcatc
ctggagctagaggatgacatccagaccatcagtgagaaagtgctgacgaaggaagtggag
ctggacaggcttagagacacagtgaaggccctgactcgggaacaagagaagctccttggg
caactgaaagaagtacaagcagacaaggagcaaagtgaggctgagctccaagtggcacaa
caggagaaccatcacttaaatttggacctgaaggaggcgaagagctggcaagaggagcag
agtgctcaggctcagcgactgaaagacaaggtggcccagatgaaggacaccctaggccag
gcccagcagcgggtggccgagctggagcccttgaaggagcagcttcgaggggcccaggag
cttgcagcctcaagccagcagaaagccacccttcttggggaggagttggccagtgcagca
gcagccagggaccgcaccatagccgaactacaccgcagccgcctggaagtggctgaagtt
aacggcaggctggctgagctcggtttgcacttgaaggaagaaaaatgccaatggagcaag
gagcgggcagggctgctgcagagtgtggaggcagagaaggacaagatcctgaagctgagt
gcagagatacttcgattggagaaggcagttcaggaggagaggacccaaaaccaagtgttc
aagactgagctggcccgggagaaggattctagcctggtacagttgtcagaaagtaagcgg
gagctgacagagctgcggtcagccctgcgtgtgctccagaaggaaaaggagcagttacag
gaggagaaacaggtgagcacccataacccaggccccgtggatgccacaggctgcccggca
gctctgacagactcagaggacgagtccccagaagacatgaggctcccaccctatggcctt
tgtgagcgtggagacccaggctcctctcctgctgggcctcgagaggcttctccccttgtt
gtcatcagccagccggctcccatttctcctcacctctctgggccagctgaggacagtagc
tctgactcggaggctgaagatgagaagtcagtcctgatggcagctgtgcagagtgggggt
gaggaggccaacttactgcttcctgaactgggcagtgccttctatgacatggccagtggc
tttacagtgggtaccctgtcagaaaccagcactgggggccctgccacccccacatggaag
gagtgtcctatctgtaaggagcgctttcctgctgagagtgacaaggatgccctggaggac
cacatggatggacacttctttttcagcacccaggaccccttcacctttgagtga

>gi568815586r:53565317_53772614|GENSCAN_predicted_peptide_6|227_aa
XDSLRGAYNVLVSPAVAVCRFAVCLLVTTSATADGASGGRETDGNAWVARAPCRPHSSCR
HEHAHTHARKTHTLPFATRSQRRITRLMVGTQKFRFPPVPMNPGAQVERILQRSHFQRRD
PNPAVLRICHKVAAKASIDPELDLISGPLVQITEMEPAKVAFSVITFNAAGHGPNVRDGV
LGPAHQMDDEVLIIPQGAVPRKVVINFSELHQFRDILYGQTVRETVI

>gi568815586r:53565317_53772614|GENSCAN_predicted_CDS_6|684_bp
nnggacagtctgcgcggggcttacaatgttcttgtttctcccgccgtagctgtttgccgt
tttgctgtttgcctccttgtcacgacctcagcgacggcagatggagccagtggagggaga
gagacagacggcaatgcttgggtagccagggctccctgccggccccactcctcctgcaga
cacgagcacgcacacacacacgcgcgcaaaacacacacgctgcccttcgccacacgtagc
caaaggagaataacaaggctcatggttggaactcagaagttccgctttcccccagtacct
atgaatcctggagcccaagtggagagaattctccaaagatcccactttcagcgcagggac
cccaatcctgcagttctccgtatctgccacaaggtggcagccaaagcatcgattgatcca
gagctagacctgatctctggacctctggtccagatcacggaaatggagcctgcaaaggtc
gcgttttccgtaataacctttaatgcggctggccacggcccaaatgttcgcgatggagtg
ctgggccccgcgcatcagatggacgatgaagtgttaatcatcccccagggagccgtcccg
cggaaagtcgtcattaatttctctgaattacaccaattccgagacattctttatggacag
acagtgcgggagacagttatatga