GENSCAN 1.0	Date run:  7-Nov-116	Time: 00:46:38

Sequence gi568815584f:64886954_65161309 : 274356 bp : 44.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  27462  27581  120  2  0   53   88   101 0.193   6.79
 1.02 Intr +  37038  37173  136  2  1   58   97    56 0.197   3.64
 1.03 Intr +  39057  39127   71  1  2   70   99    16 0.082  -0.20
 1.04 Term +  46134  46286  153  2  0  107   54    46 0.147   1.02
 1.05 PlyA +  48385  48390    6                               1.05

 2.03 PlyA -  48750  48745    6                               1.05
 2.02 Term -  52885  52535  351  1  0  114   37   507 0.999  42.69
 2.01 Init -  55773  55714   60  0  0   95   71    86 0.996   8.85
 2.00 Prom -  57409  57370   40                              -6.06

 3.12 PlyA -  57952  57947    6                               1.05
 3.11 Term -  61559  61401  159  2  0   78   47   211 0.935  13.94
 3.10 Intr -  61780  61715   66  1  0  105   78    93 0.767   9.10
 3.09 Intr -  63461  63372   90  2  0  102  111    87 0.796  12.59
 3.08 Intr -  64198  64121   78  1  0  107   75    78 0.956   8.15
 3.07 Intr -  64710  64650   61  2  1   98  115    60 0.999   8.44
 3.06 Intr -  65618  65558   61  0  1  138   93    92 0.999  12.49
 3.05 Intr -  68494  68408   87  2  0   88   82    28 0.512   2.14
 3.04 Intr -  70416  70392   25  0  1   77   97    12 0.398  -1.40
 3.03 Intr -  71036  70915  122  0  2   44   61    92 0.171   2.31
 3.02 Intr -  85147  85000  148  1  1   66   99   360 0.960  34.71
 3.01 Init -  85807  85757   51  1  0   69   88    70 0.634   6.31
 3.00 Prom -  91600  91561   40                              -8.76

 4.00 Prom +  92673  92712   40                              -7.06
 4.01 Init +  96814  96898   85  0  1   45   93    50 0.473   2.18
 4.02 Intr + 100062 100144   83  1  2   67   94   122 0.447  10.06
 4.03 Intr + 103067 103156   90  1  0  -23   99   104 0.135   0.59
 4.04 Intr + 117296 117360   65  1  2   80  121    77 0.420   7.72
 4.05 Intr + 122166 122184   19  0  1   75  105   -21 0.263  -5.09
 4.06 Intr + 124663 124844  182  0  2  101   29   177 0.307  11.77
 4.07 Intr + 125364 125436   73  0  1   68   82    46 0.565   1.41
 4.08 Intr + 128672 128763   92  1  2   97   70    70 0.696   4.89
 4.09 Intr + 140500 140646  147  1  0   69   92   192 0.998  17.05
 4.10 Intr + 140745 140828   84  0  0  111  105    61 0.989   9.04
 4.11 Intr + 145657 145743   87  1  0  102  100   100 0.992  11.69
 4.12 Intr + 153837 153966  130  0  1  105   83    86 0.977  10.50
 4.13 Intr + 157358 157490  133  1  1   88  105   113 0.999  13.22
 4.14 Intr + 166285 166396  112  2  1  105   89   102 0.987  11.44
 4.15 Intr + 167622 167736  115  0  1   92   99   103 0.995  12.25
 4.16 Term + 174228 174359  132  2  0  117   44   128 0.959   9.39
 4.17 PlyA + 175359 175364    6                               1.05

 5.00 Prom + 177104 177143   40                              -5.86
 5.01 Init + 178315 178379   65  0  2   97   82    -1 0.513   0.34
 5.02 Intr + 178910 179080  171  2  0   29  100    89 0.450   3.26
 5.03 Term + 183048 183156  109  0  1   70   42   123 0.529   3.88
 5.04 PlyA + 186661 186666    6                               1.05

 6.09 PlyA - 188195 188190    6                               1.05
 6.08 Term - 189710 189523  188  0  2   68   46   266 0.993  18.05
 6.07 Intr - 191083 190960  124  1  1   80  105   151 0.923  16.16
 6.06 Intr - 206862 206755  108  0  0  115  113    58 0.941  11.48
 6.05 Intr - 215389 215351   39  1  0   42   86    90 0.192   2.62
 6.04 Intr - 223021 222886  136  0  1   48   75    32 0.166  -1.53
 6.03 Intr - 231668 231557  112  0  1   89   82    46 0.608   3.54
 6.02 Intr - 238593 238476  118  0  1   77   58    61 0.665   2.04
 6.01 Init - 243799 243683  117  1  0  110   87    45 0.562   4.85
 6.00 Prom - 246579 246540   40                              -6.66

 7.04 PlyA - 247148 247143    6                               1.05
 7.03 Term - 248104 247935  170  2  2  134   53   112 0.962  10.34
 7.02 Intr - 248925 248893   33  1  0  109   82    40 0.678   3.69
 7.01 Init - 262647 262578   70  0  1  101   35    42 0.250   1.41
 7.00 Prom - 273408 273369   40                              -1.66


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  19918  19835   84  1  0   82   89    46 0.860   4.92


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:64886954_65161309|GENSCAN_predicted_peptide_1|159_aa
MRQPYLSSREVSSSRKRWRTFPVDCVAMCGDCVEKEYPNRGNTCLENGSFLLNFTGCAVC
SKRDFMLITNKSLKEEDGEEIVTYDHLCKNCHHVIARHEYTFSIMDEFQNSEPKSDQEKN
ITQIPIEKHSLKYLTSTSQNYQGHKKQGKSETWSQPRGA

>gi568815584f:64886954_65161309|GENSCAN_predicted_CDS_1|480_bp
atgcggcaaccgtatctcagttctcgcgaggtttcgtcttcccggaagcgttggaggaca
ttccctgttgactgcgtcgcgatgtgtggcgactgtgtggagaaggaatatcccaaccgg
ggtaatacctgcctggagaatggatctttcttactgaactttacaggctgtgcagtgtgc
agtaagcgggattttatgctgatcacaaacaaatccttgaaagaagaagatggagaagaa
atagttacctatgatcatttgtgtaagaattgtcatcatgtaatagccagacatgagtat
acattcagtatcatggatgaatttcagaactcagaacccaagtctgatcaggagaaaaac
atcacacaaattccaattgagaagcattctttaaaatacctaaccagtacttctcaaaac
tatcaaggccataaaaaacaaggaaaatctgagacatggtcacagccaagaggagcctga

>gi568815584f:64886954_65161309|GENSCAN_predicted_peptide_2|136_aa
MAFIAKSFYDLSAISLDGEKENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHP
VFAYLKDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFP
TINIEPDIKRLLKVAI

>gi568815584f:64886954_65161309|GENSCAN_predicted_CDS_2|411_bp
atggctttcattgccaagtccttctatgacctcagtgccatcagcctggatggggagaag
gagaactgtcagaatgaggagatcctgaacagtctcaagtatgtccgtcctgggggtgga
taccagcccaccttcacccttgtccaaaaatgtgaggtgaatgggcagaacgagcatcct
gtcttcgcctacctgaaggacaagctcccctacccttatgatgacccattttccctcatg
accgatcccaagctcatcatttggagccctgtgcgccgctcagatgtggcctggaacttt
gagaagttcctcatagggccggagggagagcccttccgacgctacagccgcaccttccca
accatcaacattgagcctgacatcaagcgcctccttaaagttgccatatag

>gi568815584f:64886954_65161309|GENSCAN_predicted_peptide_3|315_aa
METGVRIQILLKAFLPRFPAPLAPVMAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHS
SHISTIAWATEEDSVKKKEKRHQVCQGVREKASGMPGRVGKGIGYAREAFIQQREVLSSG
KNQQPRREREGATMGTGYWGQGLTGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQY
YRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQ
QLAKEYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELEGLRMRASNELALAELEEEE
GKPEGPANSSKTCWC

>gi568815584f:64886954_65161309|GENSCAN_predicted_CDS_3|948_bp
atggagacgggtgttcgaatccagatcctgctcaaggccttcctacctcggttcccggcc
ccgctggccccagtcatggcgaagcagtacgatgtgctgttccggctgctgctgatcggg
gactccggggtgggcaagacctgcctgctgtgccgcttcaccgacaacgagttccactcc
tcgcacatctccaccatcgcctgggcgacagaggaagactccgtcaagaaaaaagagaaa
aggcatcaggtatgccagggtgtgcgggaaaaggcatcgggtatgccagggcgtgtggga
aaaggcatcgggtatgccagggaagcctttattcagcagagggaagtgctcagcagtgga
aaaaaccaacagccacgcagggagagggaaggagccacgatgggcacgggttactggggc
cagggcttgactggtgttgactttaagatgaagaccatagaggtagacggcatcaaagtg
cggatacagatctgggacactgcagggcaggagagataccagaccatcacaaagcagtac
tatcggcgggcccaggggatatttttggtctatgacattagcagcgagcgctcttaccag
cacatcatgaagtgggtcagtgacgtggatgagtacgcaccagaaggcgtccagaagatc
cttattgggaataaggctgatgaggagcagaaacggcaggtgggaagagagcaagggcag
cagctggcgaaggagtatggcatggacttctatgaaacaagtgcctgcaccaacctcaac
attaaagagtcattcacgcgtctgacagagctggtgctgcaggcccataggaaggagctg
gaaggcctccggatgcgtgccagcaatgagttggcactggcagagctggaggaggaggag
ggcaaacccgagggcccagcgaactcttcgaaaacctgctggtgctga

>gi568815584f:64886954_65161309|GENSCAN_predicted_peptide_4|542_aa
MYYYTVSQDIKGNNSFRHTACMSENRENEPLYSLRPEHARERLQDDSVETVTSIEQMREE
AIMDLVQEYSGQRKQQAQRTKAAECQAKVEEKIQEVFSSYKFNHLVPRKDFWIESHRLFC
QTKKEVQPLCFARPVQVAMGGTFHLKASIADLKAKDSDWLQNTVLWPGLWVTRGRLVLQR
EKHFHYLKRGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQS
PEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLMHV
GGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCG
LAALVILKRERSLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRAL
HAQGDPALSMSHWMFHQQALQEYILMCCQCPAGGLLDKPGKSRDFYHTCYCLSGLSIAQH
FGSGAMLHDVVLGVPENALQPTHPVYNIGPDKVIQATTYFLQKPVPGFEELKDETSAEPA
TD

>gi568815584f:64886954_65161309|GENSCAN_predicted_CDS_4|1629_bp
atgtattactacacagtttcacaagatattaaaggaaacaattcattccgacatacggct
tgtatgagtgaaaacagggagaacgagccgctgtacagtctgaggcccgagcacgcgcga
gagcggttgcaggacgactcggtggaaacagtcacgtccatagaacagatgagggaggaa
gccatcatggatctggtgcaagagtattctgggcagagaaagcagcaagcacaaaggacc
aaggcagcagaatgccaggcaaaagtagaagaaaagatccaagaggtcttcagttcttac
aagttcaaccaccttgtaccaagaaaagatttttggatagagtcacacaggctcttctgc
cagaccaagaaagaagtgcagcctctgtgctttgcccggcctgtgcaggtggccatgggc
ggcacattccatcttaaagccagtattgctgacttgaaagccaaggacagcgactggctg
cagaacacggtcctctggccagggctgtgggtcacacgtgggaggcttgttttgcagagg
gagaagcacttccattatctgaaaagaggccttcgacaactgacagatgcctatgagtgt
ctggatgccagccgcccatggctctgctattggatcctgcacagcttggaactgctagat
gaacccatcccccagatagtggctacagatgtgtgtcagttcctggagctgtgtcagagc
ccagaaggtggctttggaggaggacccggtcagtatccacaccttgcacccacatatgca
gcagtcaatgcattgtgcatcattggcaccgaggaggcctatgacatcattaacagagag
aagcttcttcagtatttgtactccctgaagcaacctgacggctcctttctcatgcatgtc
ggaggtgaggtggatgtgagaagcgcatactgtgctgcctccgtagcctcgctgaccaac
atcatcactccagacctctttgagggcactgctgaatggatagcaaggtgtcagaactgg
gaaggtggcattggcggggtaccagggatggaagcccatggtggctataccttctgtggc
ctggccgcgctggtaatcctcaagagggaacgttccttgaacttgaagagcttattacaa
tgggtgacaagccggcagatgcgatttgaaggaggatttcagggccgctgcaacaagctg
gtggatggctgctactccttctggcaggcggggctcctgcccctgctccaccgcgcactg
cacgcccaaggtgaccctgcccttagcatgagccactggatgttccatcagcaggccctg
caggagtacatcctgatgtgctgccagtgccctgcgggggggcttctggataaacctggc
aagtcgcgtgatttctaccacacctgctactgcctgagcggcctgtccatagcccagcac
ttcggcagcggagccatgttgcatgatgtggtcctgggtgtgcccgaaaacgctctgcag
cccactcacccagtgtacaacattggaccagacaaggtgatccaggccactacatacttt
ctacagaagccagtcccaggttttgaggagcttaaggatgagacatcggcagagcctgca
accgactag

>gi568815584f:64886954_65161309|GENSCAN_predicted_peptide_5|114_aa
MALITWLPRPTWPLDFQLYETMWVKQAYYLPFTTGETGWRAYVNHPRFPSCQVVVPEPEP
VSAASKAHALPPPQASEGRAVDGTSRQETMKLSSTVHGSHGLPGCQAASRIPDE

>gi568815584f:64886954_65161309|GENSCAN_predicted_CDS_5|345_bp
atggccctgatcacatggctcccgaggcccacgtggcctctggattttcagttatatgag
acaatgtgggtgaagcaggcgtattacctgccttttacaactggagaaacaggttggaga
gcttacgtaaatcacccaaggtttcccagctgtcaagtggtggtgcctgagcccgagccc
gtatctgctgcctccaaagcccatgcccttccaccaccgcaggcctctgaaggaagagct
gttgatggcaccagcagacaggaaacaatgaagctctcaagcactgtgcatgggagccat
gggctgccgggctgccaggctgccagccggattccggatgagtga

>gi568815584f:64886954_65161309|GENSCAN_predicted_peptide_6|313_aa
MPGRNLMVLKCGALPLLLSRSLLLPSKTCFAYPLPLAIILWLCDVPPPPLPSTMIVFPEA
SPEAQQMPASRVLYSLQNRQLAREGRPDRLEEQTSSSSCQRPKDTVFLGPLTKPARRYQV
LWMNGGLQGRSELDDHQHIHDSGHEHLEERTEPQISPATNQEMSDNDDIEVESDADKRAH
HNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDD
LKRQNALLEQQVRALEKARSSAQLQTNYPSSDNSLYTNAKGSTISAFDGGSDSSSESEPE
EPQSRKKLRMEAS

>gi568815584f:64886954_65161309|GENSCAN_predicted_CDS_6|942_bp
atgcctggcagaaatctgatggttttaaagtgtggggcacttcccctcttgctgtctcgc
tccctcctgctgccctctaagacatgctttgcctaccctttaccattggccattattctc
tggctatgcgatgtgcctcctcctcctttgccttccactatgattgtgtttcctgaggcc
tctccagaagcccagcagatgccagcatcacgtgtcctgtacagcttgcagaaccgtcag
ctagccagagagggtcggcctgaccgactagaagaacagacatcttccagcagctgtcag
cgtccaaaggacactgtgttccttggacctcttaccaaaccagccaggagatatcaagtg
ctatggatgaatggagggcttcaaggaaggtctgagctagatgaccatcaacatatacat
gacagtggacatgaacatctagaggaaagaactgaaccccaaatatctccagcaaccaat
caggaaatgagcgataacgatgacatcgaggtggagagcgacgctgacaaacgggctcat
cataatgcactggaacgaaaacgtagggaccacatcaaagacagctttcacagtttgcgg
gactcagtcccatcactccaaggagagaaggcatcccgggcccaaatcctagacaaagcc
acagaatatatccagtatatgcgaaggaaaaaccacacacaccagcaagatattgacgac
ctcaagcggcagaatgctcttctggagcagcaagtccgtgcactggagaaggcgaggtca
agtgcccaactgcagaccaactacccctcctcagacaacagcctctacaccaacgccaag
ggcagcaccatctctgccttcgatgggggctcggactccagctcggagtctgagcctgaa
gagccccaaagcaggaagaagctccggatggaggccagctaa

>gi568815584f:64886954_65161309|GENSCAN_predicted_peptide_7|90_aa
MRAAYTVYCTNPEVAMCMHFSVNENLLSVLEEMGDHVVLDPETTSAYLQEAECNLSVMNT
GMKMSVPSNPQRFSYFSVLGTVGFSSGRHD

>gi568815584f:64886954_65161309|GENSCAN_predicted_CDS_7|273_bp
atgagggctgcatatactgtgtactgcacaaatccagaagttgccatgtgcatgcacttc
agtgtaaatgagaacctgctgagtgtcctggaggaaatgggagaccatgtggtcctggac
ccagaaactaccagtgcttacctccaagaagcagaatgtaatctgagtgtaatgaacaca
ggcatgaagatgtctgtgccttccaacccacagaggttctcctacttcagtgtgctgggg
actgtgggattctcatcaggcagacacgactga