GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:55:23

Sequence gi568815592r:152871166_153082959 : 211794 bp : 37.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11381  11545  165  1  0   69   81   153 0.992  12.38
 1.02 Intr +  12312  12495  184  2  1   82   71    95 0.451   5.64
 1.03 Term +  13089  13537  449  1  2   15   43   217 0.352   4.29
 1.04 PlyA +  13765  13770    6                               1.05

 2.00 Prom +  13931  13970   40                              -6.15
 2.01 Sngl +  14065  14679  615  0  0   22   41   269 0.942  11.54
 2.02 PlyA +  14737  14742    6                               1.05

 3.05 PlyA -  15052  15047    6                               1.05
 3.04 Term -  27230  27069  162  2  0   62   44   173 0.047   7.25
 3.03 Intr -  27742  27599  144  1  0   61   91   136 0.123  10.76
 3.02 Intr -  40848  40601  248  1  2   82   41   172 0.126   8.16
 3.01 Init -  50949  50856   94  0  1   86   85    32 0.513   3.29
 3.00 Prom -  52910  52871   40                              -3.65

 4.00 Prom +  57235  57274   40                              -4.55
 4.01 Init +  57386  57400   15  1  0   77   87    16 0.673   0.74
 4.02 Term +  61286  61426  141  1  0   69   34   169 0.929   6.55
 4.03 PlyA +  63013  63018    6                               1.05

 5.02 PlyA -  63831  63826    6                               1.05
 5.01 Sngl -  88613  88404  210  2  0   80   46   228 0.681  12.75
 5.00 Prom -  95683  95644   40                              -3.65

 6.07 PlyA -  96440  96435    6                               1.05
 6.06 Term -  98605  98502  104  2  2   42   42   102 0.315  -1.54
 6.05 Intr - 100249 100036  214  1  1  122   47   120 0.661   8.67
 6.04 Intr - 101289 101107  183  0  0   53   76   140 0.767   8.36
 6.03 Intr - 101971 101881   91  0  1   58  103    25 0.808   0.08
 6.02 Intr - 104456 103742  715  0  1   88  108   387 0.966  30.26
 6.01 Init - 105278 105161  118  2  1   60   74   103 0.960   6.51
 6.00 Prom - 108886 108847   40                              -7.55

 7.04 PlyA - 110724 110719    6                               1.05
 7.03 Term - 116067 115969   99  0  0  100   44   107 0.728   4.65
 7.02 Intr - 116881 116832   50  2  2   66   62    51 0.429  -2.22
 7.01 Init - 117940 117802  139  1  1   62  107    90 0.489   8.66
 7.00 Prom - 118498 118459   40                             -10.25

 8.15 PlyA - 118507 118502    6                               1.05
 8.14 Term - 118930 118730  201  1  0   77   38   163 0.924   6.61
 8.13 Intr - 120156 120020  137  1  2   67   98    65 0.997   4.77
 8.12 Intr - 121809 121692  118  0  1   66   89   142 0.999  11.22
 8.11 Intr - 123511 123348  164  2  2   92   94    83 0.999   8.07
 8.10 Intr - 124129 123971  159  2  0   62   68    98 0.913   4.24
 8.09 Intr - 126711 126516  196  0  1  -24   66   192 0.273   3.87
 8.08 Intr - 127464 127385   80  1  2  123   80    54 0.302   6.45
 8.07 Intr - 131456 131262  195  0  0   21  103   189 0.499  12.16
 8.06 Intr - 132142 131548  595  1  1   -1   53   327 0.199  11.51
 8.05 Intr - 153331 153097  235  0  1   93   83   147 0.773  11.47
 8.04 Intr - 155378 155289   90  1  0   68  101    69 0.646   4.39
 8.03 Intr - 159850 159757   94  2  1   92   81    30 0.652   0.80
 8.02 Intr - 163352 163176  177  0  0   58   74    56 0.277   0.17
 8.01 Init - 166872 166773  100  0  1   72   77   119 0.702   9.67
 8.00 Prom - 171277 171238   40                              -6.05

 9.00 Prom + 179291 179330   40                              -4.85
 9.01 Init + 185197 185241   45  0  0   91   72    14 0.313   0.83
 9.02 Term + 191992 192312  321  0  0   68   43   204 0.933   7.74
 9.03 PlyA + 192391 192396    6                               1.05

10.00 Prom + 202931 202970   40                              -3.45
10.01 Init + 205315 205428  114  0  0   79  105    77 0.892   8.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  40848  40547  302  1  2   82   31   177 0.813   5.80
S.002 Init + 144015 144149  135  2  0   50   24   157 0.867   5.69
S.003 Term + 144278 144394  117  1  0   28   45   162 0.855   3.46


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_1|265_aa
MNRHFPKEDIYVDNKCDKELNISDYQRNENQNHNEIPSNTSQNGNYKKVKKQQMLPLLMI
PRQTGSTVDLQQIPTDLQLRYLTLRRKTNKQKGIASTSTKRTSTPKAHRSPASKTKARQA
NIQIQEIQRTTQRYSSRRTTPRHIIVRFTKVEMKEKMLRAAREKGRVTHKGKPIRLTADL
SAETLQARREWGPIFNILKEKNFQPIISYPAKLSFKSEGEIKSFTDKQMLRDFVTTRPAL
KELLKEALNMERNNRYQPLQKHAKL

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_1|798_bp
atgaacagacacttcccaaaagaagacatttacgtggacaacaaatgtgacaaagagctc
aacatctctgattatcagagaaatgaaaatcaaaaccacaatgagataccatctaacacc
agtcagaatggcaattataaaaaagtcaagaaacaacagatgctgcctctgctgatgata
cccaggcaaacagggtctacagtggacctccagcaaattccaacggacctgcagctgagg
tacctgactcttagaaggaaaactaacaaacagaaaggaatagcatcaacatcaacaaaa
aggacatccacaccaaaagcccacaggtcaccagcatcaaagaccaaagcaaggcaggcc
aacattcaaattcaggaaatacagagaacaacacaaagatactcctcaagaagaacaacc
ccaagacacataattgtcagattcaccaaggttgaaatgaaggaaaaaatgctaagggca
gccagagagaaaggtcgggttacccacaaagggaagcccatcagactaacagcagatctc
tcagcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaagaa
aagaattttcaacccataatttcatatccagccaaactaagcttcaaaagtgaaggagaa
ataaaatcctttacagacaagcaaatgctgagagattttgtcaccaccaggcctgcctta
aaagagctcctgaaggaagcactaaacatggaaaggaacaaccggtaccagccattgcaa
aaacatgccaaattgtaa

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_2|204_aa
MRQKVNKDIQDLNSSLHQPDLIDIYRTLHPKSTEYTFFSAPHCTYSKIDHIIGSKALLSK
CKRTEITTNCLSDHSAIKLELRIKKLTQNHTTTWELNNLLLSDYWVNNKMKAEIKMFFET
NENKDTTYQNLSGTFKAVCRGKFIALNAYKRKQEISKIDTLTSQLKELEKQQQTHSKASR
RQEITKIRAELKEIETQKNPSKNQ

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_2|615_bp
atgagacagaaggttaacaaggatatccaggacttgaactcaagtctgcaccaaccggac
ctaatagacatctacagaactctccaccccaaatcaacagaatatacattcttctcagca
ccacattgcacttattccaaaattgaccacataattggaagtaaagcactcctcagcaaa
tgtaaaagaacagaaatcacaacaaactgtctctcagaccacagtgcaatcaaattagaa
ctcaggattaagaaactcactcaaaaccacacgactacatgggaactgaacaacctgctc
ctgagtgactactgggtaaataacaaaatgaaggcagaaataaaaatgttctttgaaacc
aatgagaacaaagacacaacgtaccagaatctctcgggcacatttaaagcagtgtgtaga
gggaaatttatagcactaaatgcctacaagagaaagcaggaaatatctaaaatcgacacc
ctaacatcacaattaaaagaactagagaagcaacagcaaacacattcaaaagctagcaga
aggcaagaaataactaagatcagagcagaactgaaggagatagagacacaaaaaaaccct
tcaaaaaatcaatga

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_3|215_aa
MVEGERHVLHYGRQEKRAYTGKLPPYKTIRSEIPEALREYCKHLYACKLENLEEMDTFLE
TYNCPRLNQKETETLNRPIMISKIELVIKSLSTRKSPGPDRFTAEFYWMYEEELVVAMAG
VSGNHHVLGINHLLGELRHYEGLVVLAAVDGQQGEDRHKEVQGVGQLEILQAVTALSLPP
HNVQYRIHQLRTFCVVPIGPVVSGTTLMEDEVVQP

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_3|648_bp
atggtggaaggtgaaaggcacgtcttacattatggcaggcaagagaagagagcttataca
gggaaactccccccttataaaaccatcaggtctgaaataccagaagccctcagagagtat
tgtaaacacctctatgcatgcaagctagaaaacctggaagagatggatacattcttggaa
acatacaactgcccaagattgaaccagaaagaaactgaaaccctaaacagaccaataatg
atctccaaaattgaattagtaataaaaagcctatcaacaagaaaaagccctggaccagac
agattcacagctgaattctactggatgtatgaggaagagctggtagtggccatggcaggg
gtctcagggaaccatcatgttcttggcatcaaccatctgctgggtgagctcaggcactat
gagggcctggtagtgctggctgctgtggatggtcagcagggtgaagacaggcataaagaa
gtgcagggagtgggtcagctggaaatcctgcaggcagtcacagctctcagcctccctcct
cacaatgtccagtaccgaatccaccagctccgcaccttctgcgtagtgcccattggccca
gttgtttccggcaccactctgatggaagatgaagttgtccagccgtaa

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_4|51_aa
MASWKADGEFEEPIAEEGTGDAVCKLTAGCYQEDNKNNTCHTWRRNSSGQQ

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_4|156_bp
atggcgtcatggaaagctgatggagaatttgaggagccgatagctgaagaaggaacaggt
gatgctgtctgtaaattgactgctggatgttaccaagaagacaataaaaacaatacgtgc
catacctggaggcgaaactccagtggacagcagtag

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_5|69_aa
MSLGFSDCTTTASPTTMSSGSENHTNTTNPRRKYGPHIGVAEQLWGIPGGKINWRRTELK
KKLISAGRC

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_5|210_bp
atgtctttgggattcagcgactgcaccacaacagcaagccccacaaccatgtcctcggga
agtgaaaaccacaccaatacaacaaaccccaggcggaagtacggaccgcatattggcgtc
gccgagcaactgtgggggatcccggggggaaaaatcaactggcgccgaaccgagctgaag
aaaaagctgatcagcgcaggccggtgttga

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_6|474_aa
MSRYSSLLSSKVDKRFEYIRRSPGAPIRIKLGDKSCGNSGCKEESSTLSVKMKCDFNCNH
VHSGLKLVKPDDIGRLVSYTPAYLEGSCKDCIKDYERLSCIGSPIVSPRIVQLETESKRL
HNKENQHVQQTLNSTNEIEALETSRLYEDSGYSSFSLQSGLSEHEEGSLLEENFGDSLQS
CLLQIQSPDQYPNKNLLPVLHFEKVVCSTLKKNAKRNPKVDREMLKEIIARGNFRLQNII
GRKMGLECVDILSELFRRGLRHVLATILAQLSDMDLINVSKVSTTWKKILEDDKGAFQLY
SKAIQRVTENNNKFSPHASTREYVMFRTPLASVQKSAAQTSLKKDAQTKLSNQGDQKGST
YSRHNEFSEVAKTLKKNESLKACIRCNSPAKYDCYLQRATCKREGCGFDYCTKCLCNYHT
TKDCSDGKLLKASCKIGPLPGSMLLDIPVHQLMDVWLFTPFPAVTSKVLSVQSN

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_6|1425_bp
atgtcccggtactcgagtttactatccagtaaggtagacaaacgctttgaatatattaga
aggtcaccaggagcacccatcagaataaaacttggagataagagctgtgggaattcaggt
tgtaaagaagaaagttctaccctttctgtcaaaatgaagtgtgattttaattgtaaccat
gttcattccggacttaaactggtaaaacctgatgacattggaagactagtttcctacacc
cctgcatatttggaaggttcctgtaaagactgcattaaagactatgaaaggctgtcatgt
attgggtcaccgattgtgagccctaggattgtacaacttgaaactgaaagcaagcgcttg
cataacaaggaaaatcaacatgtgcaacagacacttaatagtacaaatgaaatagaagca
ctagagaccagtagactttatgaagacagtggctattcctcattttctctacaaagtggc
ctcagtgaacatgaagaaggtagcctcctggaggagaatttcggtgacagtctacaatcc
tgcctgctacaaatacaaagcccagaccaatatcccaacaaaaacttgctgccagttctt
cattttgaaaaagtggtttgttcaacattaaaaaagaatgcaaaacgaaatcctaaagta
gatcgggagatgctgaaggaaattatagccagaggaaattttagactgcagaatataatt
ggcagaaaaatgggcctagaatgtgtagatattctcagcgaactctttcgaaggggactc
agacatgtcttagcaactattttagcacaactcagtgacatggacttaatcaatgtgtct
aaagtgagcacaacttggaagaagatcctagaagatgataagggggcattccagttgtac
agtaaagcaatacaaagagttaccgaaaacaacaataaattttcacctcatgcttcaacc
agagaatatgttatgttcagaaccccactggcttctgttcagaaatcagcagcccagact
tctctcaaaaaagatgctcaaaccaagttatccaatcaaggtgatcagaaaggttctact
tatagtcgacacaatgaattctctgaggttgccaagacattgaaaaagaacgaaagcctc
aaagcctgtattcgctgtaattcacctgcaaaatatgattgctatttacaacgggcaacc
tgcaaacgagaaggctgtggatttgattattgtacgaagtgtctctgtaattatcatact
actaaagactgttcagatggcaagctcctcaaagccagttgtaaaataggtcccctgcct
ggcagtatgctgttggatataccagttcaccagttgatggatgtttggctctttactcca
tttcctgctgttacaagtaaggtgctgtcagtgcaatcaaattag

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_7|95_aa
MVKSGLMERVATAYSVIGKFPVLPWARAGVPLVDQVLQAKNLTLPTAAQNEDTIPEHLNI
LHKASFVPISSEDIPYSHGSHPEGLLPPQETSDNV

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_7|288_bp
atggtgaagtcaggcctaatggagagagtggctacagcctactcagtgattgggaaattc
cctgtcttgccctgggccagagctggtgtaccgctggtggatcaggtcttacaagcaaag
aacctcacactcccaactgcagcacaaaatgaagataccatacctgaacacctgaacatt
cttcacaaggcctcctttgtgcccatttcttcagaagacatcccctacagccatggttct
catccagagggtcttttgcccccgcaggagacatctgacaacgtttag

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_8|846_aa
MYRSFGDDLGNRLVLFIPMAMAPSALEKAEHMKGIISVPLQVSGPEEFTRLCRIWLLQAW
QGSVCMLSVKVADAVSSVCITSRFPALTLIGTGLHLANNCPFSTQFNLYVFCEAFLNSLM
QKHSLTVRNEERGENAGRPTHTTKMESIQVLEECQNPTAEEVLSWSQNFDKMMKAPAGRN
LFREFLRTEYSEENLLFWLACEDLKKEQNKKVIEEKARMIYEDYISILSPKEWLSHNTLI
KSLLPRTSPTVDKRNISRKKGGGINTRLSIIKLALEDSAAALHRRLTTCAAVTSALQRTL
DCPALRLWRPRLSAWERNPHYQKTEGQSAALPFRPNTSPINRIPTKRLSEEAPKVSQARP
SPITLRSAPSTFGLREVRSVLTLGRKFPPRLPENPLKSNACAGRGLVRSHPYLQILGVVA
RAAVSGTSGSARRPLSSGSPPLEELFTRGGPLRTFLERQAGSEAHLKVRRPELLAVIKLL
NEKERELRETEHLLHDENEDLRKLAENEITLCQKEITQLKHQFLRSGNKKKEEPNKDCNM
SAYGFPIEALKIACLMRGMSRSTGVGEDSGEAVPGILLKLWLSQNPHKETDENDLILEVT
AGVGGQEAMLFTSEIFDMYQQYAAFKRWHFETLEYFPSELGGLRHASASIGGSEAYRHMK
FEGGVHRVQRVPKTEKQGRVHTSTMTVAILPQPTEINLVINPKDLRIDTKRASGAGGQHV
NTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEEINKRQNARKIQ
IGSKGRSEKIRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSLKEYADYESLVE
IISQKV

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_8|2541_bp
atgtaccggagctttggggatgaccttggtaatagactggtgctgttcatacccatggcc
atggctccctctgccctagagaaggctgaacacatgaaaggtattatttctgtcccttta
caagtctcaggcccagaggaatttaccagactgtgtaggatctggctattgcaggcttgg
caaggttctgtttgcatgttgtcagttaaggtagcggatgctgtttcttcagtctgtatc
acttcgcgcttcccagccctcacattaatcggcacaggtctccatctggcaaacaactgc
ccattttcaacccaatttaatctttacgtcttctgtgaagcctttctcaattctcttatg
caaaagcacagcctcactgtgaggaatgaagaaagaggggaaaatgcgggaagacccaca
cacactacaaaaatggagagtatccaggtcctagaggaatgccaaaaccccactgcagag
gaagtcttgtcctggtctcaaaattttgacaagatgatgaaggccccagcaggaagaaac
cttttcagagagttcctccgaacagaatacagtgaagagaacctacttttctggcttgct
tgtgaagacttaaagaaggagcagaacaaaaaagtaattgaagaaaaggctaggatgata
tatgaagattacatttctatactatcaccaaaagagtggttatctcataatacacttatc
aagtccttattaccacgaacctcacccaccgtggacaagagaaacataagcaggaaaaaa
ggaggaggaataaacacacgcctgtccataataaaactcgctcttgaagactcagcggca
gccctgcaccggagactgacgacttgcgcggctgtgacctccgccctgcagcggaccctc
gactgccctgcactgcggctctggaggccccgactcagtgcatgggaaagaaatcctcac
tatcagaaaacagaggggcaatctgctgctctccctttccggccaaacacgtcacccatc
aaccggatacctaccaagaggctttcagaggaggcgcccaaggtctcccaggcccgcccc
tccccaatcacgctccgctcagccccctcaacttttggcctccgggaagttcgcagcgtt
ctcacgcttggcaggaagttcccgccaaggcttccggaaaatcctttaaaaagcaacgct
tgcgctgggcggggcttggtgcgctctcacccttatctccaaattctgggtgttgtcgcg
agggctgctgtgtccggaacttccggttccgcccgccggcccctgagctccggtagcccg
ccgctggaggagctgttcacccggggcgggcccttgcggaccttcctcgagcgccaggcg
gggtctgaagcccatttgaaggtcaggaggcccgagttgctggcggtgatcaaactgctg
aacgagaaggagcgggagctgcgggagactgagcacttgctgcacgatgagaatgaagat
ttaaggaaacttgcagagaatgaaatcactttgtgtcaaaaagaaataactcagctgaag
catcagtttttaagatcaggaaacaaaaaaaaggaggagccaaataaggactgtaacatg
agtgcctatggatttcccattgaagctctcaaaattgcctgtttgatgagaggaatgagc
aggagcactggtgtaggagaggactctggtgaagctgtccctggtattttgctaaaactc
tggctttctcaaaaccctcataaagaaacagatgaaaatgatttgatcctggaagtaact
gcaggagttggaggtcaggaggcaatgttgtttacatcagagatatttgatatgtatcag
caatatgctgcatttaaaagatggcattttgaaaccctggaatattttccaagtgaacta
ggtggccttagacatgcatctgccagcattgggggttcagaagcctataggcacatgaaa
tttgaaggaggtgttcacagagtacaaagagtgccaaagacagaaaagcaaggccgcgtc
catactagcaccatgactgtagcaatattaccccagcctactgagattaatctggtgatt
aatccgaaagatttgagaattgacactaagcgagccagtggagctggggggcagcatgta
aataccacggacagtgctgtccggatagttcatcttccaacaggtgttgtttctgaatgt
caacaagagagatctcagctgaaaaataaagagctggctatgacaaagttacgtgcaaaa
ctgtacagcatgcatctagaagaagaaataaataaaagacagaatgctagaaaaattcag
attggaagtaaaggaagatcagagaaaataagaacatataattttccacagaaccgggtc
acagatcacagaataaacaagacgctgcatgatcttgaaacttttatgcaaggagattat
ctactggatgaacttgtacagtcattgaaggaatacgccgattatgaatctttagtagaa
attatttcccaaaaagtttaa

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_9|121_aa
MHRIRGYAFTCKIPKTQTNIYNYQDTVDSCRKKRTSPNELNKPPRINLEETEIYDLSDRE
FKISVLRKPKEIQENTEKEFRILSDKFNKDNEIIKKNQADILELKNAIGIMKNASESQKQ
N

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_9|366_bp
atgcacaggataagaggatatgcattcacttgtaagatcccaaagacacagacaaacatc
tacaactatcaagacactgttgatagttgtaggaaaaaaaggacctcaccaaatgaacta
aataagccaccaaggattaatcttgaagaaacagagatatatgacctttcggacagagaa
ttcaaaatatcagttttgaggaaacccaaagaaattcaagagaacacagagaaggaattc
agaattctatcagataaatttaacaaagataatgaaataattaaaaagaatcaagcagac
attctggagctgaaaaatgcaattggcataatgaagaatgcatctgagtctcaaaagcag
aattga

>gi568815592r:152871166_153082959|GENSCAN_predicted_peptide_10|38_aa
MNIYRVSGSRVLNTIPHKKEPELDGEIVIQGLTQKNPK

>gi568815592r:152871166_153082959|GENSCAN_predicted_CDS_10|114_bp
atgaacatatatagagtatctggatcccgggttctaaataccattccccacaaaaaggaa
ccagagctggatggagaaatagtgattcaaggtctgacacagaaaaatcctaag