GENSCAN 1.0	Date run:  8-Nov-116	Time: 17:32:29

Sequence gi568815593f:76719183_76933798 : 214616 bp : 44.12% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  13181  14321 1141  2  1   69   49   866 0.005  72.23
 1.02 PlyA +  14552  14557    6                               1.05

 2.00 Prom +  33580  33619   40                              -4.06
 2.01 Init + 100001 100082   82  1  1   61  100   166 0.939  14.23
 2.02 Term + 113508 114619 1112  1  2  137   44   744 0.968  67.12
 2.03 PlyA + 115451 115456    6                               1.05

 3.04 PlyA - 115732 115727    6                               1.05
 3.03 Term - 128352 128282   71  1  2   72   42    89 0.235   0.80
 3.02 Intr - 141130 140945  186  2  0  102   39    89 0.406   5.06
 3.01 Init - 142925 142913   13  2  1   83   87    -1 0.518  -0.35
 3.00 Prom - 151203 151164   40                              -5.16

 4.00 Prom + 151637 151676   40                              -5.16
 4.01 Init + 156178 156318  141  0  0  107  109   130 0.856  17.14
 4.02 Term + 158492 158650  159  1  0   61   43   192 0.998   9.94
 4.03 PlyA + 159380 159385    6                               1.05

 5.11 PlyA - 160783 160778    6                               1.05
 5.10 Term - 164574 164458  117  0  0   30   48    95 0.336  -1.76
 5.09 Intr - 165418 165144  275  2  2   94   80    77 0.560   4.76
 5.08 Intr - 167330 167263   68  1  2   16  114    54 0.032  -0.65
 5.07 Intr - 174713 174623   91  0  1   63   77    79 0.047   3.35
 5.06 Intr - 189097 189018   80  0  2   45   97    58 0.001   1.59
 5.05 Intr - 189990 189805  186  2  0   48   53   131 0.001   4.40
 5.04 Intr - 192721 192658   64  2  1   68   72    15 0.000  -4.32
 5.03 Intr - 195555 195430  126  1  0   43  127    45 0.001   4.55
 5.02 Intr - 195813 195611  203  2  2   69   62    95 0.001   3.93
 5.01 Intr - 205971 205883   89  0  2  109   54    30 0.004   0.47

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  10840  10849   10  0  1   77   93     4 0.817   0.57
S.002 Term +  13132  14321 1190  2  2   93   49   885 0.990  77.01
S.003 Term + 194757 194923  167  1  2   99   43   165 0.892  11.18
S.004 Sngl + 201326 201625  300  1  0   72   42   162 0.879   5.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:76719183_76933798|GENSCAN_predicted_peptide_1|380_aa
XNPNDKYEPFWEDEEKNESGLTEYRLVSINKSSPLQKQLPAFISEDASGYLTSSWLTLFV
PSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSG
SDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLA
IWALAIAGVVPLLLKEQTIQVPGLNITTCHDVLNETLLEGYYAYYFSAFSAVFFFVPLII
STVCYVSIIRCLSSSAVANRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTST
TEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVYSILCCKESSDPSSYNSSGQLMA
SKMDTCSSNLNNSIYKKLLT

>gi568815593f:76719183_76933798|GENSCAN_predicted_CDS_1|1143_bp
nngaaccccaatgataaatatgaaccattttgggaggatgaggagaaaaatgaaagtggg
ttaactgaatacagattagtctccatcaataaaagcagtcctcttcaaaaacaacttcct
gcattcatctcagaagatgcctccggatatttgaccagctcctggctgacactctttgtc
ccatctgtgtacaccggagtgtttgtagtcagcctcccactaaacatcatggccatcgtt
gtgttcatcctgaaaatgaaggtcaagaagccggcggtggtgtacatgctgcacctggcc
acggcagatgtgctgtttgtgtctgtgctcccctttaagatcagctattacttttccggc
agtgattggcagtttgggtctgaattgtgtcgcttcgtcactgcagcattttactgtaac
atgtacgcctctatcttgctcatgacagtcataagcattgaccggtttctggctgtggtg
tatcccatgcagtccctctcctggcgtactctgggaagggcttccttcacttgtctggcc
atctgggctttggccatcgcaggggtagtgcctctgctcctcaaggagcaaaccatccag
gtgcccgggctcaacatcactacctgtcatgatgtgctcaatgaaaccctgctcgaaggc
tactatgcctactacttctcagccttctctgctgtcttcttttttgtgccgctgatcatt
tccacggtctgttatgtgtctatcattcgatgtcttagctcttccgcagttgccaaccgc
agcaagaagtcccgggctttgttcctgtcagctgctgttttctgcatcttcatcatttgc
ttcggacccacaaacgtcctcctgattgcgcattactcattcctttctcacacttccacc
acagaggctgcctactttgcctacctcctctgtgtctgtgtcagcagcataagctgctgc
atcgaccccctaatttactattacgcttcctctgagtgccagaggtacgtctacagtatc
ttatgctgcaaagaaagttccgatcccagcagttataacagcagtgggcagttgatggca
agtaaaatggatacctgctctagtaacctgaataacagcatatacaaaaagctgttaact
tag

>gi568815593f:76719183_76933798|GENSCAN_predicted_peptide_2|397_aa
MRSPSAAWLLGAAILLAASLSCSGTIQGTSRSSKGRSLIGKVDGTSHVTGKGVTVETVFS
VDEFSASVLTGKLTTVFLPIVYTIVFVVGLPSNGMALWVFLFRTKKKHPAVIYMANLALA
DLLSVIWFPLKIAYHIHGNNWIYGEALCNVLIGFFYGNMYCSILFMTCLSVQRYWVIVNP
MGHSRKKANIAIGISLAIWLLILLVTIPLYVVKQTIFIPALNITTCHDVLPEQLLVGDMF
NYFLSLAIGVFLFPAFLTASAYVLMIRMLRSSAMDENSEKKRKRAIKLIVTVLAMYLICF
TPSNLLLVVHYFLIKSQGQSHVYALYIVALCLSTLNSCIDPFVYYFVSHDFRDHAKNALL
CRSVRTVKQMQVSLTSKKHSRKSSSYSSSSTTVKTSY

>gi568815593f:76719183_76933798|GENSCAN_predicted_CDS_2|1194_bp
atgcggagccccagcgcggcgtggctgctgggggccgccatcctgctagcagcctctctc
tcctgcagtggcaccatccaaggaaccagtagatcctctaaaggaagaagccttattggt
aaggttgatggcacatcccacgtcactggaaaaggagttacagttgaaacagtcttttct
gtggatgagttttctgcatctgtcctcactggaaaactgaccactgtcttccttccaatt
gtctacacaattgtgtttgtggtgggtttgccaagtaacggcatggccctgtgggtcttt
cttttccgaactaagaagaagcaccctgctgtgatttacatggccaatctggccttggct
gacctcctctctgtcatctggttccccttgaagattgcctatcacatacatggcaacaac
tggatttatggggaagctctttgtaatgtgcttattggctttttctatggcaacatgtac
tgttccattctcttcatgacctgcctcagtgtgcagaggtattgggtcatcgtgaacccc
atggggcactccaggaagaaggcaaacattgccattggcatctccctggcaatatggctg
ctgattctgctggtcaccattcctttgtatgtcgtgaagcagaccatcttcattcctgcc
ctgaacatcacgacctgtcatgatgttttgcctgagcagctcttggtgggagacatgttc
aattacttcctctctctggccattggggtctttctgttcccagccttcctcacagcctct
gcctatgtgctgatgatcagaatgctgcgatcttctgccatggatgaaaactcagagaag
aaaaggaagagggccatcaaactcattgtcactgtcctggccatgtacctgatctgcttc
actcctagtaaccttctgcttgtggtgcattattttctgattaagagccagggccagagc
catgtctatgccctgtacattgtagccctctgcctctctacccttaacagctgcatcgac
ccctttgtctattactttgtttcacatgatttcagggatcatgcaaagaacgctctcctt
tgccgaagtgtccgcactgtaaagcagatgcaagtatccctcacctcaaagaaacactcc
aggaaatccagctcttactcttcaagttcaaccactgttaagacctcctattga

>gi568815593f:76719183_76933798|GENSCAN_predicted_peptide_3|89_aa
MRKKDEVKVAGVDVASILATVAMAAESSRASVLGGHNGSGLLIWPILFCGFGHHSWKIHL
KLSKEFFLDAISKIQTMGKIYKQPGFFNK

>gi568815593f:76719183_76933798|GENSCAN_predicted_CDS_3|270_bp
atgagaaaaaaagatgaggtgaaagttgctggagtcgatgtagcatctatactggctaca
gtggcaatggctgcagagtcaagcagagcctcggtgcttggtggccacaatgggagcggt
cttctcatctggccaattctgttctgtggttttggacatcattcctggaagattcacctg
aagctctcaaaagagttctttctggatgcaatcagcaaaatccagactatggggaaaatc
tacaaacaacctggtttcttcaacaagtaa

>gi568815593f:76719183_76933798|GENSCAN_predicted_peptide_4|99_aa
MPTQLEMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLSCQKETQLVDKIVQ
DLDANKDNEVDFNEFVVMVAALTVACNDYFVEQLKKKGK

>gi568815593f:76719183_76933798|GENSCAN_predicted_CDS_4|300_bp
atgcccacccagctcgagatggccatggacaccatgattagaatcttccaccgctattct
ggcaaggaaaggaagagattcaagctcagcaagggggaactgaaactgctcctgcagcga
gagctcacggaattcctctcgtgccaaaaggaaacccagttggttgataagatagtgcag
gacctggatgccaataaggacaacgaagtggattttaatgaattcgtggtcatggtggca
gctctgacagttgcttgtaatgattactttgtagaacaattgaagaagaaaggaaaataa

>gi568815593f:76719183_76933798|GENSCAN_predicted_peptide_5|432_aa
PLIFGDPHIISSPRDRTLWQETEAFCQQHDGFLVLLTSRTKPQTLAVSVTVLKDGPEFVP
SDVQMYPEFLPSGGFVVSLTSGVKLQTFTVRVTALKGGVKLQTFAVSVTALKGGTSGVAF
SSWWVHGLSGFRSEAADLHGIHSQQKPVIPRNPRNCFNVLGTRNGPWSLLIGIAVLTDAV
AENTSCPRTHNGPWTLLIGIVALTNTAAETLVFLLDHKEDQRRTPKLNGFLSVDPWLSPE
VQEKQKLVPGKSENTIQDLQKEIVETQGAPLVDEGEAEKRDPPTTSGPQTNQPKEHLTDF
KSDLSQISQRLGSFSSDPTKYIQEFRYLTLSYNLTWSDLNVILTSTLSPDEWERVFSPAQ
SHTDNHWLHEPDLQEGIRAVPREDPNGTIRQIPQWKSDCPTHLAATPGAPGTLAQGSLTD
SFPDILSLVAKD

>gi568815593f:76719183_76933798|GENSCAN_predicted_CDS_5|1299_bp
ccactcatctttggggaccctcatatcataagcagtcctagggatcggaccttgtggcaa
gaaactgaagcattctgccaacaacatgatggattcttggtcttgctgacttcaagaaca
aagccacagacccttgcggtgagtgttacagttcttaaagatggtccggagtttgttcct
tcagatgttcagatgtatccggagtttcttccttctggtgggttcgtggtctcgctgact
tcaggagtgaagcttcagaccttcactgtgagggttacagctcttaaaggtggagtgaag
ctgcagaccttcgcggtgagtgttacagctcttaaaggtggcacgtctggagttgctttt
tcctcctggtgggtccatggtctcagtggcttcaggagtgaagctgcagaccttcacggg
atccatagtcagcaaaagccggtgattccaaggaacccccgcaactgttttaatgtctta
ggaacccgtaacggtccctggagcctgctgattggaatagctgtgctcaccgatgcagta
gccgaaaacacctcttgtccaagaacccacaatggtccctggaccctgctgatcggaata
gttgcgcttaccaacacagcagcagaaacactagttttcctcctagaccacaaggaggac
caaagaaggaccccgaagctgaatggcttcctctccgttgacccttggctcagcccagaa
gtacaggaaaagcagaaactggttccaggaaaatcagagaacacaatccaagatttgcaa
aaggagatagtagaaacccagggtgcacccttagttgatgaaggagaagctgagaaaaga
gatccacctacgacctcgggtcctcagaccaaccagcccaaggaacatctcaccgatttt
aaatcggacctttcccaaatcagccagcgtttaggctctttctcatcagaccccactaaa
tatatacaggaattccgatatctaactctgtcctacaatttaacctggagtgacttaaat
gtcatcctgacttctaccctctccccggatgaatgggaaagagttttttctccagcccaa
tctcacactgataaccactggcttcatgagccagacctccaggaaggcattagagcagtt
ccccgagaagatcccaatggaactatcaggcagattccccagtggaaatcggactgtcca
actcacctggcagccactcccggagcccctggaactctggcccaaggctctctgactgac
tcattcccagatattctcagcttagtggctaaagactga