GENSCAN 1.0	Date run:  6-Nov-116	Time: 08:43:33

Sequence gi568815585r:45093791_45294567 : 200777 bp : 39.96% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12469  12639  171  1  0   82   54   118 0.492   5.94
 1.02 Intr +  26732  26931  200  2  2   92   90   190 0.832  17.67
 1.03 Intr +  29430  29561  132  1  0   63   28   148 0.418   6.00
 1.04 Intr +  36087  36253  167  1  2   -1  100   125 0.059   3.56
 1.05 Intr +  42943  43016   74  0  2   82  108    89 0.251   7.59
 1.06 Intr +  55980  55998   19  0  1  124   94     1 0.213  -0.00
 1.07 Intr +  57897  58041  145  2  1   67  111   100 0.874   9.13
 1.08 Intr +  62373  62434   62  1  2   53  119   -14 0.421  -4.27
 1.09 Term +  62827  62901   75  0  0   87   54    98 0.542   3.16
 1.10 PlyA +  63077  63082    6                               1.05

 2.05 PlyA -  63958  63953    6                               1.05
 2.04 Term -  64387  64237  151  0  1   82   48    81 0.061  -0.10
 2.03 Intr -  85330  85168  163  2  1   39   75   131 0.274   5.01
 2.02 Intr -  89417  89292  126  0  0   29   52   101 0.472   0.33
 2.01 Init -  95420  95345   76  2  1   83   99    46 0.967   6.50
 2.00 Prom -  95597  95558   40                              -3.65

 3.02 PlyA -  95947  95942    6                               1.05
 3.01 Sngl - 100777  99998  780  1  0   71   32   602 0.994  48.64
 3.00 Prom - 107804 107765   40                              -4.55

 4.00 Prom + 112501 112540   40                              -4.15
 4.01 Init + 112777 112822   46  0  1   68   41    13 0.004  -4.50
 4.02 Intr + 113634 113715   82  1  1   73   81   110 0.006   6.58
 4.03 Intr + 159081 159180  100  0  1   84  101    88 0.031   8.89
 4.04 Intr + 173443 173586  144  0  0   70   68   141 0.457   9.86
 4.05 Term + 189652 189771  120  0  0   88   48   136 0.619   7.09
 4.06 PlyA + 190191 190196    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:45093791_45294567|GENSCAN_predicted_peptide_1|348_aa
XREHMSEQVRDLDGCFGCFQEQAACRPGSSAQVGVPATPEAPEGMLQCSFSSAVCGQCVL
AGKERRLFASQRGLSFVPDARSSALRLLGSLLHPARLHRLQTHGRARGTRLDRRQTEHRS
VASQAARLTKEDDHPDRGGLVFSQGYMYGCTPLLEPPKKLSRRAYGRPGRDLTDKMVFKQ
GRKEFMGLPLQIPMGRVFRTEITANASLDGTSPQMFTGLCGLSKVPKYLSQQWAKASGRG
EVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTE
SSSDIFGAKPCARIRLASCALRQLVSRPELEVILTAFGDESAVRKLED

>gi568815585r:45093791_45294567|GENSCAN_predicted_CDS_1|1047_bp
nncagggagcacatgagtgagcaagtgcgggatctggatggctgctttgggtgcttccag
gagcaggctgcgtgcaggcctggcagcagtgcccaggttggggtgcctgcaacccctgaa
gctccagagggcatgttacagtgttcttttagctctgccgtctgtggacagtgtgttctg
gcaggtaaggaacgccggctcttcgcctctcagcgcggcttgtcctttgttccggacgcc
cgctcctcagccctgcggctcctggggtcgctgctgcatcccgcacgcctccaccggctg
cagacccatggccgagcgcggggaactcgacttgaccggcgccaaacagaacacaggagt
gtggctagtcaagctgcacgcttgaccaaagaggatgaccatccggatagaggaggactg
gtcttcagtcaagggtatatgtatggttgtactcccctgctagaacctccaaagaagctt
tcaagaagagcttatggcaggccgggaagggacctcactgataagatggtctttaagcag
ggacgtaaagaatttatgggcttgcccttgcagatacccatgggaagagtgttccggaca
gaaataacagcaaatgcgtctttagatgggacgtcaccgcaaatgttcacaggtctgtgt
ggtttgagtaaggttcctaaatatttgtcacagcaatgggctaaagcctctggaagaggt
gaagttgggaaactgcggattgccaagactcaaggaaggactgaggtgtcatttactttg
aatgaggatcttgcaaatattcatgatattggtggaaaaccagcttcagtcagtgctcct
agagaacatccatttgtcttgcaaagtgttggaggacagacattaacagtatttactgag
agctcatcagatatttttggtgctaagccctgtgctagaataagattagcctcctgtgca
ctgaggcaactggtaagtcgaccagaattagaggttattttgacagcttttggtgatgaa
tcggctgtgaggaaattggaagattga

>gi568815585r:45093791_45294567|GENSCAN_predicted_peptide_2|171_aa
MDEAGNHHSRQNITRTENQTPHVLTHEETGIPRVKQFACSHTATKQPSKCQALNHYVIMP
SDQILELNAAEVMLHQFQAQSLRDLAAFAFAFLENSHHVKKHGLDLLNDESTKEKPQRTE
QRSLSQHVGIMGAKIQDEIWVGTETNHIKWYPEMCICDSYYRNNKMTKYEK

>gi568815585r:45093791_45294567|GENSCAN_predicted_CDS_2|516_bp
atggatgaagctggaaaccatcattctcggcaaaatatcacaaggacagaaaaccaaaca
ccacatgttctcactcatgaagaaacagggatccccagagttaagcaatttgcctgcagt
cacacagcaaccaagcaaccttcaaagtgccaagctcttaaccactatgtgataatgcct
tcggaccagatcctggaactcaatgcagctgaagtgatgctgcaccagttccaagcccag
tccttaagagacttagcagcttttgcttttgctttcttggaaaacagccaccatgtaaag
aagcatgggctagacctactaaatgacgagagcactaaagagaaaccacaaaggacagag
caaaggtccctctcacaacatgtgggaattatgggagctaaaattcaagatgagatttgg
gtggggacagagacaaaccatatcaagtggtatccagaaatgtgtatatgtgattcctac
tacagaaacaacaaaatgaccaaatacgagaaataa

>gi568815585r:45093791_45294567|GENSCAN_predicted_peptide_3|259_aa
MERKINRREKEKEYEGKHNSLEDTDQGKNCKSTLMTLNVGGYLYITQKQTLTKYPDTFLE
GIVNGKILCPFDADGHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLK
GLAEEVKSRWEKEQLTPRETTFLEITDNHDRSQGLRIFCNAPDFISKIKSRIVLVSKSRL
DGFPEEFSISSNIIQFKYFIKSENGTRLVLKEDNTFVCTLETLKFEAIMMALKCGFRLLT
SLDCSKGSIVHSDALHFIK

>gi568815585r:45093791_45294567|GENSCAN_predicted_CDS_3|780_bp
atggagcgtaaaataaacagaagagaaaaagaaaaggagtatgaagggaaacacaacagc
ctggaagatactgatcaaggaaagaactgcaaatccacactgatgaccctcaacgttggt
ggatatttatacattactcaaaaacaaacactgaccaagtacccagacactttccttgaa
ggtatagtaaatggaaaaatcctctgcccgtttgatgctgatggtcattatttcatagac
agggatggtctcctcttcaggcatgtcctaaacttcctacgaaatggagaacttctattg
cccgaagggtttcgagaaaatcaacttcttgcacaagaagcagaattctttcagctcaag
ggactggcagaggaagtgaaatccaggtgggagaaagaacagctaacacccagagagact
actttcttggaaataacagataaccacgatcgttcacaaggattaagaatcttctgtaat
gctcctgatttcatatcaaaaataaagtctcgcattgttctggtgtccaaaagcaggctg
gatggatttccagaggagttttcaatatcgtcaaatatcatccaatttaaatacttcata
aagtctgaaaatggcactcgacttgtactaaaggaagacaacacctttgtctgtaccttg
gaaactcttaagtttgaggctatcatgatggctttaaagtgtggctttagactgctgacc
agcctggattgttccaaagggtcaattgttcacagcgatgcacttcattttatcaagtaa

>gi568815585r:45093791_45294567|GENSCAN_predicted_peptide_4|163_aa
MTVSNHSHTFPGYKADKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLD
KVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDIT
KQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYRHYQGEEKSD

>gi568815585r:45093791_45294567|GENSCAN_predicted_CDS_4|492_bp
atgactgtttctaaccacagtcatacatttccagggtataaagctgataagctgtcattg
gaaggaatagtggtacaaagagctgaatgccgaccagctgccagtgaaaactacatgcga
ttaaaaagattgcaaatagaagagtcttccaaaccagtgaggctatcacaacagctggac
aaagttgtaacaaccaattacaaacctgttgctaatcatcaatacaatatcgaatatgaa
aggaaaaagaaagaagacggaaagcgagctcgagctgataaacaacatgttttagacatg
ctattttcagcctttgagaaacatcaatactataatcttaaggacttggtggacatcaca
aagcaacctgtggtgtacctgaaggaaatcttaaaagaaattggtgttcagaatgtaaaa
gggatccacaaaaacacatgggagctgaagccagagtacagacactatcaaggagaagaa
aagagtgactaa