GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:04:15

Sequence gi568815593f:171209366_171411596 : 202231 bp : 43.48% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    143    138    6                               1.05
 1.01 Sngl -   6617   6279  339  2  0   71   44   222 0.195  12.13
 1.00 Prom -   6671   6632   40                              -5.86

 2.00 Prom +  13083  13122   40                              -7.46
 2.01 Init +  15147  15366  220  2  1   51   72   103 0.497   3.79
 2.02 Intr +  18628  18881  254  2  2   60   52   158 0.146   6.55
 2.03 Intr +  25657  25738   82  0  1    7   51    83 0.058  -4.29
 2.04 Intr +  31563  31777  215  1  2   81   68   174 0.915  13.13
 2.05 Intr +  33317  33455  139  1  1   65   87    20 0.529  -0.36
 2.06 Intr +  56316  56482  167  1  2   51   93   139 0.397  10.38
 2.07 Intr +  84518  84616   99  1  0   77  113   129 0.804  14.61
 2.08 Intr +  86522  86649  128  1  2   75   99    75 0.976   6.78
 2.09 Term +  89397  89493   97  0  1  152   46    25 0.772   2.14
 2.10 PlyA +  89793  89798    6                               1.05

 3.00 Prom +  90811  90850   40                              -6.36
 3.01 Init + 100001 100421  421  1  1   89   99   483 0.958  46.05
 3.02 Intr + 100785 101028  244  1  1   84   81   460 0.998  41.46
 3.03 Intr + 102024 102228  205  0  1   94   50   250 0.773  21.00
 3.04 Intr + 104066 104184  119  1  2  151   14    -3 0.701  -2.14
 3.05 Intr + 105390 105560  171  0  0   64   43   123 0.867   4.46
 3.06 Intr + 107012 107127  116  2  2   34   53   127 0.870   3.89
 3.07 Term + 107429 107676  248  0  2   46   43   166 0.678   3.85
 3.08 PlyA + 107837 107842    6                              -0.45

 4.09 PlyA - 107884 107879    6                              -0.45
 4.08 Term - 109045 109007   39  1  0  109   42    36 0.038  -1.71
 4.07 Intr - 110165 110063  103  1  1  128   53    53 0.040   5.98
 4.06 Intr - 120934 120844   91  2  1   83   84    90 0.116   7.15
 4.05 Intr - 122176 121990  187  1  1   57   40    54 0.007  -3.24
 4.04 Intr - 127222 127031  192  1  0   42   -5   235 0.010   9.29
 4.03 Intr - 128501 128374  128  0  2   29   50    89 0.009  -0.40
 4.02 Intr - 135946 135663  284  0  2    6  -49   373 0.002  12.46
 4.01 Init - 136265 135985  281  2  2   97   -7   390 0.002  26.88
 4.00 Prom - 139393 139354   40                              -3.06

 5.00 Prom + 140927 140966   40                              -8.06
 5.01 Init + 143765 143890  126  1  0   50   89    48 0.020   1.31
 5.02 Intr + 156931 157194  264  0  0   64   55   345 0.171  26.51
 5.03 Intr + 157372 157485  114  0  0   39    4   146 0.368   1.94
 5.04 Term + 161945 162112  168  1  0   58   52   161 0.975   7.38
 5.05 PlyA + 164088 164093    6                               1.05

 6.00 Prom + 166488 166527   40                              -5.86
 6.01 Init + 176408 176420   13  1  1  113  103     8 0.504   3.82
 6.02 Intr + 178250 178325   76  0  1   10   59    72 0.289  -4.93
 6.03 Intr + 178568 178689  122  2  2   53   77   116 0.593   7.14
 6.04 Intr + 180686 180765   80  0  2   97   32   116 0.978   6.17
 6.05 Intr + 181940 182059  120  1  0   86  103    79 0.997   9.89
 6.06 Intr + 182341 182434   94  0  1   99   77    -4 0.991  -0.86
 6.07 Intr + 183345 183451  107  1  2   47   80   139 0.991   8.93
 6.08 Intr + 183549 183613   65  2  2   60   89   223 0.996  17.12
 6.09 Intr + 190788 190845   58  0  1   51   87   135 0.999   8.59
 6.10 Intr + 191474 191560   87  1  0   49  106    69 0.964   4.97
 6.11 Intr + 195937 196038  102  0  0  103   87    98 0.998  11.57
 6.12 Intr + 198335 198409   75  1  0   91   78    55 0.602   4.51
 6.13 Term + 201162 201200   39  2  0  138   48     4 0.328  -1.41
 6.14 PlyA + 201493 201498    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 126220 126410  191  0  2   83   29    83 0.906   0.38
S.002 Intr + 127006 127120  115  1  1   69  103    87 0.935   8.75
S.003 Term - 135946 135631  316  0  1    6   36   354 0.841  16.41
S.004 Init - 136265 135982  284  2  2   97   77   392 0.956  35.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:171209366_171411596|GENSCAN_predicted_peptide_1|112_aa
MGKDFMMKTPKAIATKANIDKRDLIKLKSFCTAKETIIRVNRQPTEWEKIFASYSSDNGL
ISRIYKELKQIYKKKTNNSIKKWAQDINRHFSKEDIYVANKYVKKKLIITSH

>gi568815593f:171209366_171411596|GENSCAN_predicted_CDS_1|339_bp
atgggcaaagacttcatgatgaaaacaccaaaagcaattgcaacaaaagccaacattgac
aaacgggatctaatcaaactaaagagcttctgcacagcaaaagaaactatcatcagagtg
aacaggcaacctacagaatgggagaaaatttttgcaagctactcatctgacaatggtcta
atatccagaatctacaaggaacttaaacaaatttacaagaaaaaaacaaacaactccatc
aaaaagtgggcacaggatataaacagacacttctcaaaagaagatatttatgtggccaac
aagtatgtgaaaaaaaagctcatcatcactagtcattag

>gi568815593f:171209366_171411596|GENSCAN_predicted_peptide_2|466_aa
MPNLWASKVVLFSVGLSDIEKGIAAKVEKNNYVRIMSEEEEEETEEKGNEGIGEVKWSGG
RDKTSRAFLQRKARALMEMYKEINVVFMSANTTCILQPMDQGVILTFKSYYIRNTFCKAV
AAIDSDSSDGSGQSKLKAFQKGFTILDAIKNICDSQEEVRKKELAKKSEKEQTLKKIERM
CLGRRGNQILSLGSLSKDQIYPMKLKGISICYSALKSALCGNYVSFGVFKLYGDNHFDNV
LQAFVKMLLSVSHSDLLQYRKLSQSYYPLLECLTQDHMSFIINLEPPVLMYVLTSISEGL
TTLDTVVSSSCCTSLDYIVTYLFKHIAKEGKKPLRCREATQAGQRLLHFMQQNPDVLQQM
MSVLMNTIVFEDCRNQWSVSRPLLGLILLNEKYFSELRASLINSQPLPKQEVLAQCFRNL
MEGVEQNLSVKNRDRFTQNLSVFRRDVAEALRSDGNTEPCSLDMMS

>gi568815593f:171209366_171411596|GENSCAN_predicted_CDS_2|1401_bp
atgccaaatctatgggcttcaaaggttgttctgttctctgttgggttgtctgacatagaa
aaaggcattgcagcaaaagttgagaaaaataactatgtgaggattatgtcggaggaggag
gaagaggagacagaagagaaaggaaatgaagggataggagaagtgaagtggagtggggga
agagacaaaacgtccagagcattcttgcaaagaaaagccagagctctgatggagatgtac
aaggagattaatgttgttttcatgtctgctaacacaacatgcattctgcagcccatggat
caaggagtaattttgactttcaagtcgtattatatcagaaatacattctgtaaggctgta
gctgccatagatagtgattcctctgatggatctgggcaaagtaaattgaaagccttccag
aaaggattcactattctagatgccatcaagaacatttgtgattcacaggaggaggtaaga
aagaaggaactggcaaagaagagtgagaaggagcaaacactgaagaaaatcgagagaatg
tgtcttggaagacgaggtaatcagatcctgtcccttgggagcctctcaaaagatcagatt
tatccaatgaaactcaagggcatctccatctgctattcagctctcaagtctgccttgtgt
ggaaattatgtcagctttggcgtcttcaagttgtatggggacaaccattttgacaatgta
ctccaggcttttgtcaaaatgctgctgtcagtgtcccacagtgacttgctacaataccgg
aaactgagccagtcttattatccactcctggaatgtctcactcaggaccatatgagcttc
atcatcaacttagagcctcctgtactcatgtatgttctcacatctatctcagagggactc
actactcttgatacagttgtctcctccagctgctgtaccagtttagactacatcgtcacc
tacctcttcaagcacatagcaaaagagggcaagaagccacttcgatgcagagaggctacc
caggctggtcagagactattacattttatgcagcaaaacccagatgtcctgcagcagatg
atgtctgtcctcatgaacaccattgtctttgaagactgtcggaaccagtggtcagtatcc
aggcctctcctggggctcatcctgctcaatgagaagtatttcagtgaactgagagcaagt
ttgataaacagccagcccctccccaagcaggaggtccttgcccagtgcttcagaaaccta
atggaaggagtggagcagaacctgtccgtcaagaacagagacaggttcacccaaaatctg
tctgtattcagaagagatgtggcagaggcgttgcgcagtgatggcaacactgaaccatgc
agtctcgacatgatgagctga

>gi568815593f:171209366_171411596|GENSCAN_predicted_peptide_3|507_aa
MEAPASAQTPHPHEPISFGIDQILNSPDQDSAPAPRGPDGASYLGGPPGGRPGATYPSLP
ASFAGLGAPFEDAGSYSVNLSLAPAGVIRVPAHRPLPGAVPPPLPSALPAMPSVPTVSSL
GGLNFPWMESSRRFVKDRFTAAAALTPFTVTRRIGHPYQNRTPPKRKKPRTSFSRVQICE
LEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQASRLM
LQLQHDAFQKSLNDSIQPDPLCLHNSSLFALQNLQPWEEDSSKVPAVTSLAQLPVAPKAK
HFRGRVPEHPSHSTSTPTRLIPLPPSEPEPAFAAFGVFQRFALTQPCPARDGLRVFSCYR
AEPTHVVPSSDYLSATSTQSNVGAPSGLPGLRAGAFAIRAEVGRPSRDHHERSGDTQRSH
RAPGQAKPCVNKCTKAAERLVWCRRLRSGVVKVPPQGRRFSFREIRNSAPQFQAPAPLIA
STLSDAQTQAVHCLGSDTGKVLEKLPW

>gi568815593f:171209366_171411596|GENSCAN_predicted_CDS_3|1524_bp
atggaggcgcccgccagcgcgcagaccccgcacccgcacgagcccatcagcttcggcatc
gaccagatccttaacagcccggaccaggacagcgcacccgccccgcggggccccgacggc
gccagctacctgggagggccccccgggggccgtccgggcgccacatacccgtctctgccc
gcctcctttgcgggcctcggcgcgcccttcgaggacgcgggatcttacagtgtgaacctg
agcctagcgcccgcaggcgtgatccgggtgccggcgcacaggccgctgcccggggccgtg
ccaccgcctctgccaagcgcgctacccgccatgccctccgtgcccacggtctccagcctt
ggcggtctcaatttcccctggatggagagcagccgccgcttcgtgaaagaccgcttcaca
gcggcggccgcactcacgcccttcaccgtgacccggcgcatcggccacccctaccagaac
cggacgccgcccaagcgtaagaagccgcgcacgtccttttcccgggtgcagatctgcgag
ctggaaaagcgcttccatcgccagaagtacctggcctctgccgagagggcggcgctcgcc
aagtccctcaaaatgacggacgcgcaggtcaagacctggttccaaaaccggaggaccaag
tggcggcggcagacggcggaggagcgggaggcggagcggcagcaggcgagccggctcatg
ctgcagctgcaacacgacgccttccaaaagagcctcaacgactccatccagcctgacccg
ctctgtctgcacaactcgtcactctttgctctgcagaatctgcagccctgggaggaggat
agttccaaggttcccgctgtcacctccctggcccagctcccagtagctcctaaggcaaaa
cactttcggggccgcgtcccagagcacccctcccactccacgagcacccccacccgcctc
atcccactgcctccctcggagccggagcctgccttcgcggcgtttggcgtcttccagcgc
tttgccctcacccagccttgcccagccagagacgggctacgggtcttttcctgttacaga
gctgagcccactcatgtggtgccaagtagcgactatctctcggccacctccacccagagc
aatgtgggcgcccccagcggcctcccaggcttgcgcgctggcgcctttgccatccgtgcc
gaagtggggagacctagccgcgaccaccacgagcgcagcggtgacacccagaggtcccac
cgggcccctgggcaggctaaaccgtgtgtaaacaagtgcaccaaggccgcagagcggctg
gtgtggtgcaggcgcctgcgttctggagtagtgaaggttcctccacagggaaggcggttt
tccttccgtgaaattcgaaattcagccccccagttccaagcgcctgctccgttaatagca
tctactctcagcgacgcccagacccaggctgtgcactgtcttggctcagacactggcaaa
gtcctcgagaaattgccttggtga

>gi568815593f:171209366_171411596|GENSCAN_predicted_peptide_4|434_aa
MSMLGLQKRPAASVLRYGKKKVWLDPNEANEIASANSRQQIRKLIKDGLIICKPVTVHSQ
AQCRKNTLAHRKGRHMGTGKRKGTANAPMPEKVTRYRDSKKINHHMYHSLYLKVKESVFK
DKQILMEHIHKLKADKAGKKLLADQAEACRPKTKEARKQREECLQAKKEGIINTLSKDEE
MKKQKLPLLTVPPSRYRAQRPVNINIPVKCALPLIPFPPQIVFLLLRVSSKTALEADIDY
EGQKPWLKCRFFPKAPGKLPDHPPYRAQRQIQLIQKAFDGGRSTKRGKGFLALQNLSFVV
NVAGTPPKNGGLMECAPAGLTADTHARGACIQEGWSGLRTWEIQESLPDFSYNILQAGFL
IQEGFRDSLPRATAVVSSQVQASVSVPLAESPQPQQLWATPGRLTATGVHQSLFFCLSWE
SESHYVPGTKVPQL

>gi568815593f:171209366_171411596|GENSCAN_predicted_CDS_4|1305_bp
atgagcatgctcgggcttcagaagaggcctgccgctagtgtcctccgctatggcaagaag
aaggtctggttggaccccaatgaggccaatgaaatcgccagtgccaactcccgacagcag
atccggaagctgatcaaagatgggctgattatctgtaagcctgtgactgtccattcccag
gctcaatgccggaaaaacaccttggcccaccggaagggcaggcacatgggcacgggtaag
cgaaagggtacagccaatgccccaatgccagagaaggtcacaagataccgtgactctaag
aagatcaatcaccacatgtatcatagcctgtacctgaaggtgaaggagagtgtgttcaaa
gacaagcagattctcatggaacatatccacaagctgaaggcagacaaggccggcaagaag
ctcctggctgaccaggctgaggcctgcaggcctaagaccaaggaagcacgaaagcaacgt
gaagagtgcctccaggccaagaaggaggggatcatcaacactttgtcgaaggacgaagag
atgaagaaacaaaagctcccccttttgactgtgccgccttccagatatcgagcacaacga
ccagtaaatattaacattcctgttaaatgtgcgctgcctcttattcctttccccccacaa
attgtcttcctgctcctccgagtgtcatccaaaacagcattagaggctgacattgattat
gaaggccaaaaaccgtggctgaaatgccgcttctttcctaaagcacctggaaagcttcca
gatcatccgccttaccgtgctcagcggcagatccagttgattcagaaagcatttgatgga
ggaagaagcaccaagcgtggcaaaggcttcctggcccttcagaatctgagttttgtggta
aatgtggcaggcaccccacctaagaatggaggactcatggaatgtgcacctgctgggctg
acagcagacacccatgccaggggagcctgcattcaggagggatggagtggcttgaggact
tgggagatccaggagtccttgccagatttctcctacaatattttgcaagcaggtttcctc
attcaggaaggcttccgtgattcgctcccccgggccacagctgtcgtcagctcccaagtg
caggcctccgtgtcagttcctctggctgaaagtcctcagccccagcagctgtgggctaca
ccagggcgcctcaccgccacaggggttcaccagagcctgttcttctgcctgagctgggag
tcagagtctcactacgtcccaggaacaaaagtgccccagctgtag

>gi568815593f:171209366_171411596|GENSCAN_predicted_peptide_5|223_aa
MPWVTAEKASALCHRAAHTPGPGPRGPEREHSERRSQQEVAQCRLRTGMRGAFGKPQGTV
ARVHIGQVIMSICTKLQNKEHVIEALHRAKFKFPGRQKIHISKKWGFIKFNANEFEDMVA
EKRLILDGCGRAELSFAAATGATPIAGHFTPGTFINQVQAAFWELRLLLQIQQSKDEWIV
LTMTRIPLGSVLGRGAISRTQTGVDDPGKVLPGPEEGSWTTSP

>gi568815593f:171209366_171411596|GENSCAN_predicted_CDS_5|672_bp
atgccgtgggttactgcagaaaaagccagtgccctctgccacagagctgcacatacacct
ggcccaggccccagagggcctgaaagagaacattcggagaggcgaagccagcaagaggtg
gcacaatgtaggctccggacaggcatgcgaggtgcctttggaaagccccagggcactgtg
gccagggttcacattggccaagttatcatgtccatctgtaccaagctgcagaacaaggag
catgtgatagaagccctgcacagggccaagttcaagtttcctggccgccagaagatccac
atctcaaagaagtggggcttcatcaagttcaatgccaatgaatttgaggacatggtggct
gagaagcggctcatcctagatggctgtgggcgggctgagctgagctttgctgctgccaca
ggagccactcctattgctggccacttcacccctggaaccttcattaaccaggtccaggca
gccttctgggagctgcgtctgttgctgcaaattcagcaatccaaggatgagtggattgtt
ctcaccatgaccagaattcccctgggatctgtgctcggcagaggtgccatctcccgaacc
cagactggagttgatgatccagggaaggtgcttccgggtcctgaagagggctcctggacc
accagcccctga

>gi568815593f:171209366_171411596|GENSCAN_predicted_peptide_6|345_aa
MAHACDSSGGVGPVYECACSVGARGVPGRSACRHPMEDSMDMDMSPLRPQNYLFGNCWGE
LERGRAGPGGGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEG
SPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVEEDAESEDEE
EEDVKLLSISGKRSAPGGGSKVPQKKVKLAADEDDDDDDEEDDDEDDDDDDFDDEEAEEK
APVKKSIRDTPAKNAQKSNQNGKDSKPSSTPRSKGQESFKKQEKTPKTPKGPSSVEDIKA
KMQASIEKGGSLPKVEAKFINYVKNCFRMTDQEAIQDLWQWRKSL

>gi568815593f:171209366_171411596|GENSCAN_predicted_CDS_6|1038_bp
atggctcacgcatgcgacagcagcggaggggtggggccagtgtacgagtgcgcgtgctcg
gtgggagcccgcggagtacctggaaggagtgcgtgccgccacccgatggaagattcgatg
gacatggacatgagccccctgaggccccagaactatcttttcggtaactgctggggggag
ctggagcgaggccgagcggggcctggtggcggttgtgaactaaaggccgacaaagattat
cactttaaggtggataatgatgaaaatgagcaccagttatctttaagaacggtcagttta
ggggctggtgcaaaggatgagttgcacattgttgaagcagaggcaatgaattacgaaggc
agtccaattaaagtaacactggcaactttgaaaatgtctgtacagccaacggtttccctt
gggggctttgaaataacaccaccagtggtcttaaggttgaagtgtggttcagggccagtg
catattagtggacagcacttagtagctgtggaggaagatgcagagtcagaagatgaagag
gaggaggatgtgaaactcttaagtatatctggaaagcggtctgcccctggaggtggtagc
aaggttccacagaaaaaagtaaaacttgctgctgatgaagatgatgacgatgatgatgaa
gaggatgatgatgaagatgatgatgatgatgattttgatgatgaggaagctgaagaaaaa
gcgccagtgaagaaatctatacgagatactccagccaaaaatgcacaaaagtcaaatcag
aatggaaaagactcaaaaccatcatcaacaccaagatcaaaaggacaagaatccttcaag
aaacaggaaaaaactcctaaaacaccaaaaggacctagttctgtagaagacattaaagca
aaaatgcaagcaagtatagaaaaaggtggttctcttcccaaagtggaagccaaattcatc
aattatgtgaagaattgcttccggatgactgaccaagaggctattcaagatctctggcag
tggaggaagtctctttaa