GENSCAN 1.0	Date run:  5-Nov-116	Time: 07:08:06

Sequence gi568815596r:171685277_171993260 : 307984 bp : 39.30% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2165   2351  187  1  1   47  111   117 0.330   8.24
 1.02 Intr +   2445   2597  153  1  0   46   94    64 0.772   1.92
 1.03 Term +   2790   3004  215  1  2   77   42   141 0.959   4.81
 1.04 PlyA +   3204   3209    6                              -3.64

 2.00 Prom +   3354   3393   40                              -4.95
 2.01 Init +   4880   4987  108  1  0   68   47   126 0.711   6.77
 2.02 Intr +   7501   7618  118  0  1   26   87   107 0.599   3.52
 2.03 Intr +  40342  40437   96  2  0  124   65   177 0.989  18.06
 2.04 Intr +  40643  40805  163  0  1   67   57   124 0.999   5.31
 2.05 Intr +  40918  41017  100  1  1   48   98    49 0.687   1.09
 2.06 Intr +  41515  41640  126  0  0   19   80   110 0.619   3.26
 2.07 Intr +  42545  42691  147  1  0   38   98    75 0.870   3.01
 2.08 Intr +  43441  43574  134  0  2   51   97   148 0.990  10.52
 2.09 Intr +  44433  44577  145  0  1   25   65   105 0.956   1.26
 2.10 Intr +  58773  58913  141  2  0   89   83    88 0.991   8.03
 2.11 Intr +  60526  60651  126  0  0   56   64   138 0.979   8.16
 2.12 Term +  62500  62613  114  0  0   72   32   243 0.919  14.69
 2.13 PlyA +  63114  63119    6                               1.05

 3.03 PlyA -  63718  63713    6                               1.05
 3.02 Term -  71978  71848  131  0  2   56   38   118 0.693   0.96
 3.01 Init -  72807  72540  268  0  1   64   72   220 0.893  15.19
 3.00 Prom -  81504  81465   40                              -5.25

 4.20 PlyA -  84276  84271    6                               1.05
 4.19 Term - 100199  99998  202  1  1  101   45   239 0.670  16.78
 4.18 Intr - 102385 102295   91  2  1  105   95    86 0.982   9.13
 4.17 Intr - 102671 102513  159  0  0   59   96   162 0.991  13.14
 4.16 Intr - 106313 106175  139  2  1   64   93    91 0.995   6.32
 4.15 Intr - 108491 108351  141  2  0  109   98   175 0.997  20.23
 4.14 Intr - 124410 124330   81  0  0   76   75   103 0.516   6.72
 4.13 Intr - 125000 124948   53  0  2   99   93    24 0.959   1.71
 4.12 Intr - 128221 128063  159  2  0   76   84   112 0.877   8.64
 4.11 Intr - 129926 129845   82  2  1   92  105     9 0.796   1.29
 4.10 Intr - 141606 141522   85  2  1   51   80    60 0.410   0.40
 4.09 Intr - 148780 148687   94  2  1  100  110    69 0.953   8.40
 4.08 Intr - 149589 149451  139  0  1   95   90    84 0.993   8.42
 4.07 Intr - 151991 151845  147  2  0   95   89   102 0.996  10.51
 4.06 Intr - 159232 159093  140  2  2   96   99    96 0.999  10.76
 4.05 Intr - 170673 170558  116  2  2   93   87    83 0.925   7.87
 4.04 Intr - 183547 183405  143  1  2   55  106   184 0.963  15.13
 4.03 Intr - 202379 202248  132  2  0   53   10   146 0.029   3.22
 4.02 Intr - 207982 207929   54  1  0  130   99    14 0.083   4.96
 4.01 Init - 208938 208927   12  0  0   91   57    31 0.804  -0.05
 4.00 Prom - 217158 217119   40                              -4.85

 5.00 Prom + 219934 219973   40                              -3.95
 5.01 Sngl + 237141 237503  363  2  0   38   34   316 0.846  17.33
 5.02 PlyA + 240663 240668    6                               1.05

 6.02 PlyA - 240787 240782    6                               1.05
 6.01 Sngl - 255604 255149  456  1  0   57   44   232 0.539  11.63
 6.00 Prom - 257354 257315   40                              -7.35

 7.00 Prom + 258456 258495   40                              -6.15
 7.01 Init + 260581 260629   49  0  1   86   89    28 0.688   1.86
 7.02 Intr + 261432 261507   76  1  1   53   80    41 0.665  -2.55
 7.03 Intr + 267605 267725  121  2  1   90   94    85 0.833   8.88
 7.04 Intr + 280062 280241  180  2  0   99   98    53 0.988   6.54
 7.05 Intr + 280511 280632  122  1  2  122   84    88 0.999  10.17
 7.06 Intr + 281133 281237  105  0  0  100   86    64 0.964   5.81
 7.07 Intr + 281567 281673  107  2  2   41   91    75 0.880   2.04
 7.08 Intr + 290881 291032  152  2  2   51   63   111 0.949   3.86
 7.09 Intr + 293971 294087  117  0  0   86   97   139 0.999  14.34
 7.10 Term + 297909 298076  168  2  0   54   43   192 0.997   8.20
 7.11 PlyA + 298329 298334    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:171685277_171993260|GENSCAN_predicted_peptide_1|184_aa
VFLVAGVCSSSRSCQFVRRGRKLDSWPENIRRSFPVFGKAEILKAPGLTGFFVLSTGFCF
TTALAVAAAAHPSLCALESRGAGGGYSWCWGLRRGTLPGSCRREDSSPSSHLTEAAWGAL
RLVRRPLASSGRPAVDRALLAVTPGEKVIRFRLAPFYKLRPSLLALIVSPLTLCVMESPR
TRRF

>gi568815596r:171685277_171993260|GENSCAN_predicted_CDS_1|555_bp
gttttccttgttgccggggtttgtagttcttctcgatcgtgtcagtttgtaaggcgaggg
cggaagttggattcctggcctgagaatattaggcgtagttttccagtttttggcaaagcg
gaaatacttaaggcccctgggttgactgggttctttgttttatctaccggcttctgcttt
acgacagctctcgccgtagcagccgccgcccatccctctttgtgtgctttggaaagccgc
ggagctggtggtggctacagttggtgttgggggcttaggcgagggacgttaccgggaagt
tgcaggcgggaggactcttccccatccagtcacctgacagaggcggcctggggagccttg
aggcttgtccggcgcccactggcttcttccggacgccctgccgtggaccgcgccctcttg
gccgtgaccccaggggagaaagtgattcgttttcgccttgccccattttacaaattaagg
ccatctctacttgccttgatagtgtctcccctcaccttatgtgtgatggaaagcccccga
acacggaggttctag

>gi568815596r:171685277_171993260|GENSCAN_predicted_peptide_2|505_aa
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKETDQKKEAVAPVQEESDLEKKRREA
EALLQSMGLTPESPIDEEEDDDVVAPKPPIEPEEEKTLKKDEENDSKAPPHELTEEEKQQ
ILHSEEFLSFFDHSTRIVERALSEQINIFFDYSGRDLEDKEGEIQAGAKLSLNRQFFDER
WSKHRVVSCLDWSSQYPELLVASYNNNEDAPHEPDGVALVWNMKYKKTTPEYVFHCQSAV
MSATFAKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTDSMELVHKQSKAVA
VTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGISEMFEGHQGPITGIHCHAAVGAVDF
SHLFVTSSFDWTVKLWTTKNNKPLYSFEDNADYVYDVMWSPTHPALFACVDGMGRLDLWN
LNNDTEVPTASISVEGNPALNRVRWTHSGREIAVGDSEGQIVIYDVGEQIAVPRNDEWAR
FGRTLAEINANRADAEEEAATRIPA

>gi568815596r:171685277_171993260|GENSCAN_predicted_CDS_2|1518_bp
atgtcagacaaaagtgaattaaaggctgagttggaacgtaagaagcagcgactggcccaa
atcagagaggaaaagaagagaaaagaagaagaaaggaaaaaaaaagaaacagaccagaag
aaggaagctgttgctcctgtgcaagaagaatcagatcttgaaaaaaaaaggagagaagct
gaagcattgcttcaaagcatggggctaactccagaatcccccattgatgaagaggaagat
gatgatgtagtggctcctaaaccacctattgaacctgaagaagagaaaactttaaagaaa
gatgaggaaaatgatagtaaagctccccctcatgagctgactgaagaagaaaagcaacaa
atcttgcactctgaggaatttttaagtttctttgaccattctacaagaattgtagaaaga
gctctttctgagcagattaacatcttctttgactatagtgggagagatttggaagacaaa
gaaggagagattcaagcaggtgctaaactgtcattaaatcgacaattttttgacgaacgt
tggtcaaagcatcgggtggttagttgtttggattggtcatctcagtatccggagttactc
gtggcttcctataacaacaatgaagatgcccctcatgagcctgatggtgtggcccttgta
tggaatatgaaatacaaaaaaactaccccagagtatgtgtttcactgccagtcagctgtg
atgtctgccacatttgcaaaatttcatccaaatcttgttgttggtggtacatattcaggc
caaattgtgctttgggataaccgtagcaataaaagaactccagtgcaaagaactccactg
tcagcagctgcacacacagatagcatggagttggttcataaacagtcaaaagcagtagct
gtgacatctatgtccttccctgttggagatgtcaacaactttgttgttgggagtgaagaa
ggttctgtgtacacagcatgccgccatggcagcaaagctggaatcagtgagatgtttgag
gggcatcaaggaccaatcactggcatccattgtcatgcagctgttggagcagtagacttc
tcacatctttttgtcacttcatcgtttgactggacagtaaagctttggacaactaagaat
aacaagcctttgtattcatttgaagataatgcagactatgtttatgatgttatgtggtca
cctacccacccagccctgtttgcctgtgtggatggcatggggagattggatttgtggaat
ctcaataatgacacagaggtaccaactgccagcatttctgtggagggtaatcctgctctt
aatcgtgtgagatggacccattctggcagagagattgctgtgggtgattctgaaggacag
attgttatatacgatgtgggagagcagattgctgttccccgcaatgatgaatgggcacgg
tttggccgaacacttgcagaaattaatgcaaaccgagctgatgcagaggaggaagcagct
acccgaatacctgcttag

>gi568815596r:171685277_171993260|GENSCAN_predicted_peptide_3|132_aa
MRNDKGDTATDPTEIQTTIREYYKYLYANKLENLEEMAEFLDTYTLPSLNQEEGESLNRP
ITSSEMKAVIVYRPKNVQDQTDSQPNSTRVLEVVARAIRQEKEIKGIQTGKEEELSLFAD
DMIVYLENPISA

>gi568815596r:171685277_171993260|GENSCAN_predicted_CDS_3|399_bp
atgagaaatgacaaaggggatactgccactgatcccacagaaatacaaactaccatcaga
gaatactataaatacctctatgcaaataaactagaaaatctagaagaaatggctgaattc
ctggacacatacaccctcccaagtctaaaccaggaagaaggtgaatccctgaatagacca
ataacaagttctgaaatgaaggcagtaatagtctaccgaccaaaaaacgtccaggatcag
acagattcacagccgaattctaccagagtgttggaagttgtggccagggcaatcaggcaa
gagaaagaaataaagggtattcagacaggaaaagaggaagaactgtctctgtttgcagat
gacatgattgtatatttagaaaaccccatctcagcctaa

>gi568815596r:171685277_171993260|GENSCAN_predicted_peptide_4|722_aa
MAVKVQTTKRGDPHELRNIFLQLHQQCTVAKGDNRSSEEEGEVGQQEHKSDKFLNEELIL
SVPCGKYASTEVDGERYMTPEDFVQRYLGLYNDPNSNPKIVQLLAGVADQTKDGLISYQE
FLAFESVLCAPDSMFIVAFQLFDKSGNGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLH
FGHNRKKHLNYTEFTQFLQELQLEHARQAFALKDKSKSGMISGLDFSDIMVTIRSHMLTP
FVEENLVSAAGGSISHQVSFSYFNAFNSLLNNMELVRKIYSTLAGTRKDVEVTKEEFAQS
AIRYGQVTPLEIDILYQLADLYNASGRLTLADIERIAPLAEGALPYNLAELQRQQSPGLG
RPIWLQIAESAYRFTLGSVAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCF
KKVLRYEGFFGLYRGLIPQLIGVAPEKAIKLTVNDFVRDKFTRRDGSVPLPAEVLAGGCA
GGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVLRDLGIFGLYKGAKACFLRDIPFSA
IYFPVYAHCKLLLADENGHVGGLNLLAAGAMAGVPAASLVTPADVIKTRLQVAARAGQTT
YSGVIDCFRKILREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRWFYIDFGGLKPAG
SEPTPKSRIADLPPANPDHIGGYRLATATFAGIENKFGLYLPKFKSPSVAVVQPKAAVAA
TQ

>gi568815596r:171685277_171993260|GENSCAN_predicted_CDS_4|2169_bp
atggcggtcaaggtgcagacaactaagcgaggggatcctcatgagttaagaaacatattt
ctacagctacatcagcagtgtacagtagcaaaaggagacaatagaagcagtgaagaagaa
ggtgaggtgggacagcaggaacataagtctgacaaatttctaaatgaagagttaattttg
tctgtcccttgtggcaaatatgccagtactgaggttgatggagagcgttatatgacccca
gaagactttgttcagcgctatcttggactgtataatgatccaaatagtaacccaaagatc
gtgcagctcttggcaggagtagctgatcaaaccaaggatgggttgatctcctatcaagag
tttttggcatttgaatctgttttatgtgctccagattccatgttcatagtggctttccag
ttgtttgacaagagtggaaatggagaggtgacatttgaaaatgtcaaagaaatttttgga
cagactattattcatcatcatatcccttttaactgggattgtgaatttatccgactgcat
tttgggcataaccggaagaagcatcttaactacacagaattcacgcagtttctccaggag
ctgcaattggaacatgcaagacaagcctttgcactcaaagacaaaagcaaaagtggcatg
atttctggtctggatttcagtgacatcatggttaccattagatctcacatgcttactcct
tttgtggaggagaacttagtttcagcagctggaggaagtatctcacaccaggttagcttc
tcctacttcaatgcatttaactcgttactgaataacatggagcttgttcgtaagatatat
agcactctagctggcacaaggaaagatgttgaagtcacaaaggaggaatttgcccagagt
gccatacgctatggacaagtcacaccactagaaattgatattctatatcagcttgcagac
ttatataatgcttcagggcgcttgactttggcagatattgagagaatagccccattggct
gagggggccttaccttacaacctggcagaacttcagagacagcagtctcctgggttaggc
aggcctatctggctccagattgccgagtctgcttacagattcactctgggctcagttgct
ggagctgtgggagccactgcagtgtatcctatagatctggtgaagacccgaatgcaaaac
cagcgtggctctggctctgttgttggggagctaatgtacaaaaacagctttgactgtttt
aagaaagtcttgcgttatgagggcttctttggactctacaggggtctgataccacaactt
ataggggttgctccagaaaaggccattaaactgactgttaatgattttgttcgggacaaa
tttaccagaagagatggctctgttccacttccagcagaagttcttgctggaggctgtgct
ggaggctctcaggtcatttttaccaacccattggagatagtgaagattcgtctgcaagta
gctggagagatcaccacgggacccagagtcagcgccctgaatgtgctccgggacttggga
atttttggtctgtataagggtgccaaagcgtgtttcctccgagacattcccttctctgca
atctattttcctgtttatgctcattgcaaactacttctggctgatgaaaatggacacgtg
ggaggtttaaatcttcttgcagctggagccatggcaggtgtcccagctgcatctctggtg
acccctgctgatgtcatcaagacaagactgcaggtggctgcccgcgctggccagacgaca
tacagtggtgtcatcgactgtttcaggaagattctccgggaagaagggccctcagcattt
tggaaagggactgcagctcgagtgtttcgatcctctccccagtttggtgttaccttggtc
acttatgaacttctccagcggtggttttacattgattttggaggcctcaaacccgctggt
tcagaaccaacacctaagtcacgcattgcagaccttcctcctgccaaccctgatcacatc
ggtggatacagactcgccacagccacgtttgcaggcatcgaaaacaaatttggcctttat
ctcccgaaatttaagtctcctagtgttgctgtggttcagccaaaggcagcagtggcagcc
actcagtga

>gi568815596r:171685277_171993260|GENSCAN_predicted_peptide_5|120_aa
MSDCAVTSGPGARGLIRPSSAAGDRSSEMAGKLPGKVYQGEEAARSGIERRDGGDNARLE
LSGCSLGSRRPAWDRKRGTLSPAAPCWRRSAPPPPTAWGSAPSASNPAPTEGRRRQGKAS

>gi568815596r:171685277_171993260|GENSCAN_predicted_CDS_5|363_bp
atgtcagactgtgcggtcacttccggcccgggagcgcgcgggttgattcgtccttcctca
gccgcgggtgatcgtagctcggaaatggcgggtaagttaccgggaaaagtttaccaaggg
gaggaggcggccagatcggggatagaacgccgagacggtggtgacaatgcccgcctagaa
ctttcgggctgtagcctgggttccagaaggcctgcttgggaccggaagcgcggaactctc
agcccagcagctccttgttggcggcggtccgcgcccccgcccccaactgcttggggttct
gcgccttctgccagcaatccggcccctaccgagggccgaagacgccagggaaaagcgtca
tga

>gi568815596r:171685277_171993260|GENSCAN_predicted_peptide_6|151_aa
MRQQKTLRLPTKRKLHLKYQESYLNYGFTATGDSHSPSPLCIVHGDQLSNKATKPSKLLS
YIETKHPALKDKPLEFSKEKNMNMKNRSNLLKATTSSNASALRAPFLMANQIAKTKKPFT
TGEELILPAAKDICRELLGEARIQKVARVPP

>gi568815596r:171685277_171993260|GENSCAN_predicted_CDS_6|456_bp
atgagacagcagaagactctaagactgccaacaaaaagaaagctgcatttaaaataccaa
gagtcctacttaaattatgggttcactgcaacaggtgattcacattctccaagccctctg
tgtatagtacatggtgaccagctatccaacaaagccacaaaaccttcaaaactgcttagt
tacatcgagaccaagcaccctgcattaaaagacaagcctttggagttttcaaaagaaaaa
aacatgaacatgaagaacagaagcaatttattgaaggccaccacttcatcaaatgcgtct
gcactgagagctccattcttaatggctaaccaaattgctaaaactaagaagccctttact
actggtgaagagttaatcctgcctgctgctaaggacatttgtcgtgaacttttaggagag
gctcgaattcaaaaggtggcgcgtgttcctccttag

>gi568815596r:171685277_171993260|GENSCAN_predicted_peptide_7|398_aa
MGFHHVGQAGLELLTSVRFPEDLENDIRTFFPEYTHQLFGDDETAFGYKGLKILLYYIAG
SLSTMFRVEYASKVDENFDCVEADDVEGKIRQIIPPGFCTNTNDFLSLLEKEVDFKPFGT
LLHTYSVLSPTGGENFTFQIYKADMTCRGFREYHERLQTFLMWFIETASFIDVDDERWHY
FLVFEKYNKDGATLFATVGYMTVYNYYVYPDKTRPRVSQMLILTPFQGQGHGAQLLETVH
RYYTEFPTVLDITAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMVIEAQQKF
KINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEE
LTNQMNQIEISMQHEQLEESFQELVEDYRRVIERLAQE

>gi568815596r:171685277_171993260|GENSCAN_predicted_CDS_7|1197_bp
atggggtttcaccatgttggccaggctggtcttgaactcctgacctcagttcgttttcct
gaagatcttgaaaatgacattagaactttctttcctgagtatacccatcaactctttggg
gatgatgaaactgcttttggttacaagggtctaaagatcctgttatactatattgctggt
agcctgtcaacaatgttccgtgttgaatatgcatctaaagttgatgagaactttgactgt
gtagaggcagatgatgttgagggcaaaattagacaaatcattccacctggattttgcaca
aacacgaatgatttcctttctttactggaaaaggaagttgatttcaagccattcggaacc
ttacttcatacctactcagttctcagtccaacaggaggagaaaactttacctttcagata
tataaggctgacatgacatgtagaggctttcgagaatatcatgaaaggcttcagaccttt
ttgatgtggtttattgaaactgctagctttattgacgtggatgatgaaagatggcactac
tttctagtatttgagaagtataataaggatggagctacgctctttgcgaccgtaggctac
atgacagtctataattactatgtgtacccagacaaaacccggccacgtgtaagtcagatg
ctgattttgactccatttcaaggtcaaggccatggtgctcaacttcttgaaacagttcat
agatactacactgaatttcctacagttcttgatattacagcggaagatccatccaaaagc
tatgtgaaattacgagactttgtgcttgtgaagctttgtcaagatttgccctgtttttcc
cgggaaaaattaatgcaaggattcaatgaagatatggtgatagaggcacaacagaagttc
aaaataaataagcaacacgctagaagggtttatgaaattcttcgactactggtaactgac
atgagtgatgccgaacaatacagaagctacagactggatattaaaagaagactaattagc
ccatataagaaaaagcagagagatcttgctaagatgagaaaatgtctcagaccagaagaa
ctgacaaaccagatgaaccaaatagaaataagcatgcaacatgaacagctggaagagagt
tttcaggaactagtggaagattaccggcgtgttattgaacgacttgctcaagagtaa