GENSCAN 1.0	Date run:  8-Nov-116	Time: 12:10:48

Sequence gi568815587r:124653649_124862154 : 208506 bp : 43.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   1145   1007  139  2  1  101   91    43 0.510   5.94
 1.03 Intr -   7155   6980  176  1  2   57   91    80 0.913   4.86
 1.02 Intr -  15873  15712  162  1  0   82  116   162 0.989  18.35
 1.01 Init -  20060  19994   67  2  1   91   94    89 0.892   9.05
 1.00 Prom -  32569  32530   40                              -4.66

 2.00 Prom +  34366  34405   40                              -4.76
 2.01 Init +  40649  40794  146  1  2   28   61   134 0.183   4.29
 2.02 Intr +  60133  60227   95  1  2   82   60    60 0.117   2.21
 2.03 Intr +  86264  86451  188  0  2   15  103   153 0.479   8.91
 2.04 Intr +  89672  89692   21  1  0  114  100    -7 0.434   0.84
 2.05 Term +  91855  92076  222  0  0   80   47   291 0.698  21.12
 2.06 PlyA +  93537  93542    6                               1.05

 3.18 PlyA -  93846  93841    6                              -1.75
 3.17 Term -  94019  93887  133  1  1   65   38   136 0.569   3.86
 3.16 Intr -  94886  94742  145  0  1   61   97    69 0.804   4.44
 3.15 Intr -  95115  94996  120  1  0   77   70   153 0.974  12.87
 3.14 Intr -  96218  96060  159  0  0  116  116    12 0.988   6.76
 3.13 Intr -  97273  97066  208  1  1   95   82   200 0.999  18.75
 3.12 Intr -  97932  97775  158  1  2   85   55   186 0.942  14.73
 3.11 Intr -  98517  98429   89  2  2   67   65    71 0.453   2.31
 3.10 Intr - 100692 100566  127  1  1   73  108    94 0.927   9.64
 3.09 Intr - 101115 100993  123  1  0   79   82   119 0.998  10.96
 3.08 Intr - 102714 102559  156  1  0   62   66    63 0.452   1.48
 3.07 Intr - 103094 102893  202  2  1   46   92   216 0.995  16.66
 3.06 Intr - 104879 104701  179  0  2   93   94    89 0.693   9.64
 3.05 Intr - 105409 105247  163  1  1   82   21    79 0.689   0.15
 3.04 Intr - 105736 105447  290  2  2   53   28   135 0.560   0.96
 3.03 Intr - 106187 106061  127  2  1   74   59    45 0.398   0.45
 3.02 Intr - 108298 108219   80  2  2   92   94     8 0.650   1.07
 3.01 Init - 108506 108437   70  2  1   72  109   115 0.996  11.22
 3.00 Prom - 111652 111613   40                              -4.86

 4.10 PlyA - 113093 113088    6                               1.05
 4.09 Term - 114380 113528  853  1  1   78   42   337 0.616  20.39
 4.08 Intr - 119406 119346   61  1  1   90   98    23 0.606   1.29
 4.07 Intr - 121186 121071  116  0  2   43   86    94 0.245   4.79
 4.06 Intr - 124863 124776   88  1  1  119   -4    49 0.007  -2.17
 4.05 Intr - 132068 131917  152  1  2   80   65    61 0.030   2.81
 4.04 Intr - 138024 137918  107  0  2   83    4    94 0.024  -0.49
 4.03 Intr - 146977 146223  755  2  2  101   86   730 0.077  65.28
 4.02 Intr - 149593 149433  161  0  2   46   56    51 0.022  -2.67
 4.01 Init - 164662 164592   71  1  2   64   83    78 0.231   5.42
 4.00 Prom - 180732 180693   40                              -5.06

 5.05 PlyA - 180979 180974    6                               1.05
 5.04 Term - 185573 185452  122  0  2   73   50    96 0.697   2.94
 5.03 Intr - 185775 185623  153  1  0   92   59    45 0.702   2.04
 5.02 Intr - 188294 188261   34  2  1   85  121    -2 0.585   0.60
 5.01 Intr - 195365 195346   20  0  2  129   78     7 0.085   0.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  32237  32159   79  2  1   70  103    42 0.837   5.12


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:124653649_124862154|GENSCAN_predicted_peptide_1|182_aa
MVAPGLVLGLVLPLILWADRSAGIGFRFASYINNDMVLQKEPAGAVIWGFGTPGATVTVT
LRQGQETIMKKVTSVKAHSDTWMVVLDPMKPGGPFEVMAQQTLEKINFTLRVHDVLFGDV
WLCSGQSNMQMTVLQIFNATRELSNTAAYQSVRILSVSPIQAEQELEDLVAVDLQWSKPT
SX

>gi568815587r:124653649_124862154|GENSCAN_predicted_CDS_1|546_bp
atggtcgcgccggggcttgtactcgggctggtgctgccattaatcctgtgggccgacaga
agtgcaggtattggttttcgctttgcttcatacatcaataatgatatggtgctgcagaag
gagcctgctggggcagtgatatggggcttcggtacacctggagccacagtgaccgtgacc
ctgcgccaaggtcaggaaaccatcatgaagaaagtgaccagtgtgaaagctcactctgat
acgtggatggtggtactggatcctatgaagcctggaggacctttcgaagtgatggcacaa
cagactttggagaaaataaacttcaccctgagagttcatgacgtcctgtttggagatgtc
tggctctgtagtgggcagagtaacatgcagatgactgtgttacagatatttaatgctaca
agggagttgtctaacactgcggcatatcagtctgtccgcatcctctctgtctctcccatt
caagcagagcaggagctggaggaccttgttgcggttgacttgcagtggtctaagcccacc
tcagnn

>gi568815587r:124653649_124862154|GENSCAN_predicted_peptide_2|223_aa
MKDSSEEDKEKEEVAAVKIQAAFRGHIAREEAKKMKTNSLQNEEKEENKYIHSSGIVFKL
LKEIISNLEFCVTKLSYKYEGYIRERSRARETGPESRAAVSARVGWRPTAPEPPPGTTQT
PPPPCASLRPRRGPPDTSMDCCTLRGQGGKENACSKPDDDILDIPLDDPGANAAAAKIQA
SFRGHMARKKIKSGERGRKGPGPGGPGGAGVARGGAGGGPSGD

>gi568815587r:124653649_124862154|GENSCAN_predicted_CDS_2|672_bp
atgaaggactcttctgaggaagataaggaaaaagaagaggttgctgctgtcaaaatccaa
gctgccttccggggacacatagccagagaggaggcaaagaaaatgaaaacaaatagtctt
caaaatgaggaaaaagaggaaaacaaatacatacacagtagtgggattgtcttcaaactt
ctcaaggaaattatttcaaacctagaattctgtgtcaccaaactgtcctacaagtatgag
ggttacattcgcgagcggagccgagcgcgggagaccggacccgagagcagagctgctgtt
tcggcgcgggtcggctggcggccgactgccccagagcccccacccggcaccacacagacc
ccacccccgccctgcgccagccttcgtccccgcagaggaccccccgacaccagcatggac
tgctgcaccctgcgaggccaaggaggaaaggagaacgcctgctccaagccggacgacgac
attctagacatcccgctggacgatcccggcgccaacgcggccgccgccaaaatccaggcg
agttttcggggccacatggcgcggaagaagataaagagcggagagcgcggccggaagggc
ccgggccctggggggcctggcggagctggggtggcccggggaggcgcgggcggcggcccc
agcggagactag

>gi568815587r:124653649_124862154|GENSCAN_predicted_peptide_3|842_aa
MISLPGPLVTNLLRFLFLGLSALGHHWLALTSRFVGDSPQFGCGGGWRGESLRSSGPPFI
VFCLITGYKFPAQTTEILQEMGRGMLRRPSNRGQRMSISGRRGANDGPLLETNTPVHPLS
AGHTQGRLHTCLETVVRAALNSLPPESSLPRSPEPQKGSEELSGFQPSVFRGKPASEIAR
EGGEHRIHWLLASSEGAAGLIGNQTASQTPPPFENSGVRDPGGPEQHPYSPSGKLGKQVG
YVAPPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEVSSSQPWEVPFVMWFFKQKEK
EDQVLSYINGVTTSKPGVSLVYSMPSRNLSLRLEGLQEKDSGPYSCSVNVQDKQGKSRGH
SIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSKPAVQYQWDRQLPSFQTFFAP
ALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLEVSTGPGAAVVAGAVVGTLVG
LGLLAGLVLLYHRRGKALEEPANDIKSRTGRPDAAMAELPGPFLCGALLGFLCLSGLAVE
VKVPTEPLSTPLGKTAELTCTYSTSVGDSFALEWSFVQPGKPISESHPILYFTNGHLYPT
GSKSKRVSLLQNPPTVGVATLKLTDVHPSDTGTYLCQVNNPPDFYTNGLGLINLTVLVPP
SNPLCSQSGQTSVGGSTALRCSSSEGAPKPVYNWVRLGTFPTPSPGSMVQDEVSGQLILT
NLSLTSSGTYRCVATNQMGSASCELTLSVTEPSQGRVAGALIGVLLGVLLLSVAAFCLVR
FQKERGKKPKETYGGSDLREDAIAPGISEHTCMRADSSKGFLERPSSASTVTTTKSKLPM
VV

>gi568815587r:124653649_124862154|GENSCAN_predicted_CDS_3|2529_bp
atgatttccctcccggggcccctggtgaccaacttgctgcggtttttgttcctggggctg
agtgccctcgggcatcactggctggcgctgacttctcgctttgtcggggacagcccccag
tttgggtgtgggggcggatggcggggggagagcctccggtctagtggcccccccttcatt
gtcttctgccttatcactgggtacaaatttcctgcccagaccacagagatcctccaggaa
atgggaagggggatgctgcgaaggccaagtaacagagggcaaaggatgagtatttctgga
cgccgtggtgcaaacgatggccccctccttgaaaccaacaccccggtccaccccctgagc
gccggacacactcaggggaggcttcatacttgtctagagaccgtcgttcgcgctgccctt
aattccttgccacccgagagttctctgcccagatcgcccgaaccccagaagggctccgag
gagctttctgggtttcaaccctccgttttccgagggaagcccgcctctgagattgcgcgg
gagggcggggagcatcgcattcactggctcctggcaagctcagaaggagccgcagggtta
ataggtaaccagacggcctcccaaacccctccgccctttgagaactcgggagtgagggac
cctggcggcccggagcagcatccctactctccctcaggaaaactagggaagcaagtgggc
tacgtggcgccgcccccctcgcgggcccagctgcaactgcacttgcccgccaaccggttg
caggcggtggagggaggggaagtggtgcttccagcgtggtacaccttgcacggggaggtg
tcttcatcccagccatgggaggtgccctttgtgatgtggttcttcaaacagaaagaaaag
gaggatcaggtgttgtcctacatcaatggggtcacaacaagcaaacctggagtatccttg
gtctactccatgccctcccggaacctgtccctgcggctggagggtctccaggagaaagac
tctggcccctacagctgctccgtgaatgtgcaagacaaacaaggcaaatctaggggccac
agcatcaaaaccttagaactcaatgtactggttcctccagctcctccatcctgccgtctc
cagggtgtgccccatgtgggggcaaacgtgaccctgagctgccagtctccaaggagtaag
cccgctgtccaataccagtgggatcggcagcttccatccttccagactttctttgcacca
gcattagatgtcatccgtgggtctttaagcctcaccaacctttcgtcttccatggctgga
gtctatgtctgcaaggcccacaatgaggtgggcactgcccaatgtaatgtgacgctggaa
gtgagcacagggcctggagctgcagtggttgctggagctgttgtgggtaccctggttgga
ctggggttgctggctgggctggtcctcttgtaccaccgccggggcaaggccctggaggag
ccagccaatgatatcaagagcaggacaggacggccggacgcggccatggccgagctcccg
gggccctttctctgcggggccctgctaggcttcctgtgcctgagtgggctggccgtggag
gtgaaggtacccacagagccgctgagcacgcccctggggaagacagccgagctgacctgc
acctacagcacgtcggtgggagacagcttcgccctggagtggagctttgtgcagcctggg
aaacccatctctgagtcccatccaatcctgtacttcaccaatggccatctgtatccaact
ggttctaagtcaaagcgggtcagcctgcttcagaacccccccacagtgggggtggccaca
ctgaaactgactgacgtccacccctcagatactggaacctacctctgccaagtcaacaac
ccaccagatttctacaccaatgggttggggctaatcaaccttactgtgctggttcccccc
agtaatcccttatgcagtcagagtggacaaacctctgtgggaggctctactgcactgaga
tgcagctcttccgagggggctcctaagccagtgtacaactgggtgcgtcttggaactttt
cctacaccttctcctggcagcatggttcaagatgaggtgtctggccagctcattctcacc
aacctctccctgacctcctcgggcacctaccgctgtgtggccaccaaccagatgggcagt
gcatcctgtgagctgaccctctctgtgaccgaaccctcccaaggccgagtggccggagct
ctgattggggtgctcctgggcgtgctgttgctgtcagttgctgcgttctgcctggtcagg
ttccagaaagagagggggaagaagcccaaggagacatatgggggtagtgaccttcgggag
gatgccatcgctcctgggatctctgagcacacttgtatgagggctgattctagcaagggg
ttcctggaaagaccctcgtctgccagcaccgtgacgaccaccaagtccaagctccctatg
gtcgtgtga

>gi568815587r:124653649_124862154|GENSCAN_predicted_peptide_4|787_aa
MRRHRKMTSEVEMSGKVREKEQMEFKRFSCLWPFGESRPRSSPNQGSYTLFGTLQFLVSP
SFWEPPHSLVPSAEAARARGFGAPRPRPSPRERSGRRGRARGERPRGVDDLRPAATSSAA
ETRSHPPAGEPGPRAAPETAVAGCAGASLPGGAAAAAWKMAAPCGSELPANSPLKIPKME
VLSPASPGGLSDGNPSLSDPSTPRGASPLGPGSAAGSGAAASGGLGLGLGGRSAASSSVS
FSPGGGGGGAAAAAAAACRGMSWTPAETNALIAVWGNERLVEARYQQLEGAGTVFGSKAP
GPAMYERVSRALAELGYERTPSQCRERIKKCPHQMLVQRKSGRMEAADPTDIGQRAYSSE
TGSSGNETLVPPQLSGMLTAGGFWLISSEFHSAQGNCLTQGEGPPLSGGSLNPMTASFRI
QYSLTTLPPGGDNSIMSIYRGDFQHSGLYQELESDGSTMEDYSQEDWGNHSQDLHGYPTD
QELDEIPVTKRTLKIKQESSEEAQKRDIMQNIVQILESVQLKWELFQSWTDFSRLHLSNK
LAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRIIMTRVQKMNWKNVY
YKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECIE
RPLSPHMEQSSLDPGKEGRVDLETLSAQASLQVEIEPTRIIYCYLGIAEVRTLQQCLFLH
FQANTKTFSKDWVGINGFLSQNCIVDPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIG
YPLKFNN

>gi568815587r:124653649_124862154|GENSCAN_predicted_CDS_4|2364_bp
atgaggaggcaccgaaaaatgacatccgaggttgagatgtcggggaaggtgagggagaag
gagcagatggaattcaagcgattctcctgcctgtggccctttggggagtccagacctagg
agctccccgaaccagggctcttacaccctctttgggactctgcagttcctggtgtcgcca
agcttctgggagccaccacattccctggtaccatcagcagaagctgctcgtgctcggggc
ttcggcgcgcctcgtccccgcccttcgccccgggagaggagcgggcggcgtgggagggct
cgcggagaaaggcccaggggagtggacgacctccgcccggcagccacatcctcagcagca
gagacccggagccatccgcccgcgggcgagccaggcccgagggcagccccggagaccgcg
gtggccggatgcgcgggcgcgtcacttccgggcggtgcagcggcggccgcttggaagatg
gctgcgccctgtggctcggagctgcccgccaactcgccgctaaaaattccgaagatggag
gtgctttccccggcttctcctggtggcctgagcgacggaaatccatcgctgtccgaccct
tccacgcctcggggtgcctccccgctcgggccgggcagtgcggcgggctcgggggcagcg
gcgtccgggggtctcgggctggggctggggggccgcagcgccgcctcgtcctcggtctcc
ttctcccctggtggcggcggtggcggggctgcggcagccgccgccgccgcctgccggggc
atgtcgtggacgccagccgagacgaacgcgctcatcgcagtgtggggcaacgagcggctg
gtggaggcgcggtaccagcagctggagggagccggcacggtgttcggcagcaaggccccc
gggccagccatgtacgagcgcgtgtcccgggccctggccgagctgggctacgagcggacc
ccgtcccagtgccgggagcgcatcaagaaatgccctcaccaaatgctggtgcaaagaaag
tctggaaggatggaagctgccgatcccactgatattgggcagcgggcttactcctcggag
actggcagctcagggaatgagacgctagtccccccccagctgtctggaatgctgactgct
ggtggcttctggttgatttcttcagaatttcactctgcccaaggcaactgtctcacccaa
ggtgagggccccccactctctggtggcagcctgaatccaatgactgcttctttcaggata
cagtattctctcacaactcttcctccagggggagacaacagcatcatgtcaatttaccgg
ggagatttccaacatagtggcttgtaccaggagctggagtcagatggcagcactatggag
gactattcacaggaggactggggaaaccacagtcaggatctccatggctatccaacagat
caggaattggatgaaatacctgtcacaaagagaacattaaaaataaaacaagagtcttct
gaagaagcacagaagagagacatcatgcagaatattgtacagattttggaatcggtacag
ttgaaatgggaactttttcagagctggacagacttttcaaggctccatctttctaataaa
ctggccatttttggaattggttataacacccgttggaaagaggatatccgttaccattat
gctgagatcagctcccaggtgccccttggcaagcgacttcgggagtacttcaactctgag
aagcctgaaggacggatcattatgacccgagtgcagaaaatgaactggaaaaatgtttac
tacaaatttttagagatcactattagcgaagctaggtgcttggagctgcacatggaaatt
gactggatacccattgcccactccaaaccaactggtgggaatgttgttcaatatttattg
cctgggggtattcctaaaagcccaggcctttatgccattggctatgaagaatgtattgag
aggcccctctcaccacacatggagcaaagttccctggacccaggaaaagagggccgggtt
gacctggaaaccctttcagcacaagcctcattacaggtggaaatagaacccacccgaatt
atctattgctacctcgggattgctgaggtcaggactctacagcagtgcttatttttacat
ttccaagcgaataccaaaaccttcagcaaagattgggttggtattaacgggtttttgtct
cagaactgtattgtggatcccggagtttcccccaaatccatctacatcaaatttgtagaa
gtagagagggattttctttccgcaggctctttagttgagtgcctggaaaaagccattgga
taccccttaaaatttaacaactga

>gi568815587r:124653649_124862154|GENSCAN_predicted_peptide_5|109_aa
XEDQIHKAARRLVFQSQEAPAALRVPSLPAGGVSAGAAVGKEAVERPAAARGGAINLEQM
RPDSHPARGAELDGFQAEVTRDFGHTEPVLLTPPPLPAAHCVPTCREKE

>gi568815587r:124653649_124862154|GENSCAN_predicted_CDS_5|330_bp
ngtgaggatcaaattcacaaagcagccaggagacttgtcttccagtctcaggaagccccg
gccgcgcttcgtgttccctccctccccgcgggaggggtctcagctggggctgcagttggt
aaagaggccgtggagaggccggcggcggcccgaggaggagccataaatttggagcagatg
cggcctgacagtcacccagcccggggagctgagttagatggattccaggccgaggtgacc
cgggactttggacacacggagcctgtgctcctcactcccccacctctgccggccgcccat
tgtgtgcccacgtgcagggagaaggaatag