GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:28:12

Sequence gi568815586r:92044083_92245535 : 201453 bp : 39.18% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2904   3030  127  1  1   69   55   107 0.178   4.32
 1.02 Term +   7808   7835   28  2  1  130   47    28 0.347  -0.53
 1.03 PlyA +   8060   8065    6                               1.05

 2.00 Prom +  13829  13868   40                              -5.15
 2.01 Sngl +  13883  14143  261  1  0   71   38   226 0.699  10.81
 2.02 PlyA +  16917  16922    6                               1.05

 3.02 PlyA -  17225  17220    6                               1.05
 3.01 Sngl -  39568  39419  150  1  0   73   47   201 0.784   8.42
 3.00 Prom -  41229  41190   40                              -7.15

 4.00 Prom +  45221  45260   40                              -3.25
 4.01 Init +  50023  50030    8  0  2  103  108     0 0.865   4.05
 4.02 Term +  50647  50803  157  1  1  126   52    46 0.830   1.22
 4.03 PlyA +  51109  51114    6                               1.05

 5.07 PlyA -  51128  51123    6                               1.05
 5.06 Term -  58208  58099  110  0  2   92   34    80 0.069   0.69
 5.05 Intr -  77647  77594   54  2  0  102   94    50 0.354   5.03
 5.04 Intr - 100365 100003  363  1  0  108   42   394 0.037  31.03
 5.03 Intr - 101096 100978  119  1  2   53   47   136 0.529   5.19
 5.02 Intr - 101550 101179  372  2  0   90   58   294 0.821  19.85
 5.01 Init - 102482 102259  224  2  2   79  -37   252 0.647   8.88
 5.00 Prom - 120350 120311   40                              -3.65

 6.00 Prom + 122158 122197   40                              -8.95
 6.01 Init + 124318 124587  270  0  0   88   32   154 0.703   6.81
 6.02 Term + 124646 124798  153  1  0   17   39   198 0.834   4.74
 6.03 PlyA + 124937 124942    6                               1.05

 7.11 PlyA - 125041 125036    6                               1.05
 7.10 Term - 132895 132788  108  1  0  108   47   138 0.935   9.23
 7.09 Intr - 137390 137312   79  1  1   46   66    43 0.054  -3.47
 7.08 Intr - 143128 142984  145  2  1   66   22   140 0.300   3.62
 7.07 Intr - 157892 157809   84  0  0   86  100    51 0.272   4.97
 7.06 Intr - 159218 159185   34  2  1   96   30    40 0.079  -4.12
 7.05 Intr - 169915 169725  191  2  2   56   76   113 0.064   5.28
 7.04 Intr - 180992 180967   26  1  2   92  113    21 0.004   1.75
 7.03 Intr - 190283 190148  136  0  1   36   58    97 0.009   0.21
 7.02 Intr - 197774 197689   86  1  2   59  116    50 0.507   3.44
 7.01 Init - 198693 198641   53  0  2   53  113    28 0.473   2.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 100365  99998  368  1  2  108   44   411 0.953  32.48
S.002 Init + 174537 174604   68  2  2   85  119    61 0.853   9.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:92044083_92245535|GENSCAN_predicted_peptide_1|51_aa
XVNALDKSPAEYNKTENLTEEKPLYLYIYKPKHNCPCRMKMHMCCIFTSNP

>gi568815586r:92044083_92245535|GENSCAN_predicted_CDS_1|156_bp
natgtcaacgctctagacaaaagccctgctgagtacaacaaaaccgaaaacctgacagag
gaaaaacctttatatctttatatctacaagcccaaacacaattgtccctgcaggatgaaa
atgcatatgtgctgcatcttcacatccaatccataa

>gi568815586r:92044083_92245535|GENSCAN_predicted_peptide_2|86_aa
MGKDFMTRTPKAIATKAKTEKRDLIKLKSFCTAKEIIIRVNGQPTEWEEIFAIYPSDKGL
ISRIYKELKHIYKRMSFGIKQTCVNK

>gi568815586r:92044083_92245535|GENSCAN_predicted_CDS_2|261_bp
atgggcaaagacttcatgacaagaacgccaaaagcaattgcaacgaaagccaaaactgaa
aaacgggatctaattaaactaaagagcttctgcacagcaaaagaaattatcatcagagtg
aacgggcaacctacagaatgggaggaaatttttgcaatctatccatctgacaaagggcta
atatccagaatttataaggaacttaaacatatttacaagaggatgagctttggaatcaaa
cagacctgcgttaataagtag

>gi568815586r:92044083_92245535|GENSCAN_predicted_peptide_3|49_aa
MVADSDTCFITGFEEGRRRLQAKECGYPLEAAKARMVSPLEPPEKAQAS

>gi568815586r:92044083_92245535|GENSCAN_predicted_CDS_3|150_bp
atggtagcagactcagacacgtgcttcatcactggctttgaagaaggaagaagaaggctg
caggccaaggaatgcggctaccctctagaagctgcaaaggcaagaatggtttctcctcta
gagcctccagaaaaagcccaggctagctga

>gi568815586r:92044083_92245535|GENSCAN_predicted_peptide_4|54_aa
MPNKPIAIAFVSAMKRTQIDGRDTTVEETTHTADTPTQEGQSHSHWLNVYSPVC

>gi568815586r:92044083_92245535|GENSCAN_predicted_CDS_4|165_bp
atgcccaacaagcctattgctattgcttttgtgtcagccatgaaaagaacacaaatagat
ggcagagacaccacggtggaagaaacaacacacactgcagacacaccaactcaggaagga
cagagtcactctcattggctaaatgtgtacagtccagtttgctga

>gi568815586r:92044083_92245535|GENSCAN_predicted_peptide_5|413_aa
MAPRRWQLVCEGTLAPRGCSPFSWTERPAGPFPPLSPALRQRTASTHSAGARIAPHHTRL
RLEEPVTETRSGNEILPPGEEARGGCSAVGAAPPSPSRPGPPPHAAPMHPFYTRAATMIG
EIAAAVSFISKFLRTKGLTSERQLQTFSQSLQELLAGEQGEGVGGTRAPHPWVRVRPSGL
REPRQRPGAGRAWAPPRDRWQNGEEKTTRTTKKLKPTEAGAAVRGPSADLGTKEPWGWEH
YKHHWFPEKPCKGSGYRCIRINHKMDPLIGQAAQRIGLSSQELFRLLPSELTLWVDPYEV
SYRIGEDGSICVLYEASPAGGSTQNSTNVQMVDSRISCKEELLLGRTSPSKNYNMMTVSV
TRITEKNIATTKCPAFQQNRNLLFILSFAVSSKFLDEIHKELVESTSLFDESW

>gi568815586r:92044083_92245535|GENSCAN_predicted_CDS_5|1242_bp
atggctccgcggcgttggcagctcgtctgcgaggggaccctggctccccgaggctgcagt
cctttttcttggacagaacgccccgcaggaccgttccctccactttcccccgcactaagg
cagcgcaccgccagcacacacagcgctggcgcccgcatcgcgccgcaccacacgcgtctc
cggcttgaggagccagtcaccgagacccggagcgggaacgagatccttccgcccggtgag
gaagcccggggtggctgctccgccgtcggggccgcgccgccgagccccagccgccccggg
ccgcccccgcacgccgcccccatgcatcccttctacacccgggccgccaccatgataggc
gagatcgccgccgccgtgtccttcatctccaagtttctccgcaccaaggggctcacgagc
gagcgacagctgcagaccttcagccagagcctgcaggagctgctggcaggtgagcagggc
gagggcgtcggagggacgcgggccccacatccctgggtcagagtccggccgtcggggctg
cgggaacctcggcagcgccccggggccggtcgcgcttgggccccgccgcgggaccgctgg
caaaacggagaggagaagacaacacgcacaacaaagaaacttaagcccaccgaggcggga
gctgcggtccgaggaccgtcggcggatttggggacaaaggagccgtggggctgggaacat
tataaacatcactggttcccagaaaagccatgcaagggatcgggttaccgttgtattcgc
atcaaccataaaatggatcctctgattggacaggcagcacagcggattggactgagcagt
caggagctgttcaggcttctcccaagtgaactcacactctgggttgacccctatgaagtg
tcctacagaattggagaggatggctccatctgtgtgctgtatgaagcctcaccagcagga
ggtagcactcaaaacagcaccaacgtgcaaatggtagacagccgaatcagctgtaaggag
gaacttctcttgggcagaacgagcccttccaaaaactacaatatgatgactgtatcagtt
acccgaattactgaaaaaaatattgcaaccactaagtgtccagctttccagcagaatagg
aatctattatttatcctgtcctttgctgtgtcctctaaattcctggatgaaattcacaag
gagcttgtagagtctacttcgctgtttgatgagagttggtga

>gi568815586r:92044083_92245535|GENSCAN_predicted_peptide_6|140_aa
MMNTTGKMRGTPYVIFRPFRKHEVVPLAMYMQICKKGDIIDIKGVGTVQKGMPHKCYHGK
AERVYLVPQHAAGIVVNKQLKGKIPAKRINENDQKKKEAKENGTWVQLKRQPPPPRKADF
VRTNGKKPELLDPLPYEFMA

>gi568815586r:92044083_92245535|GENSCAN_predicted_CDS_6|423_bp
atgatgaacacaacgggaaagatgagaggcaccccatatgtgatttttaggccttttaga
aaacatgaagttgttcctttggccatgtacatgcaaatctgtaagaaaggtgatatcata
gacatcaaaggagtgggtactgttcaaaaaggaatgccccacaagtgttaccatgggaaa
gctgaaagagtctaccttgttccccagcatgctgctggcattgttgtaaacaaacaactt
aagggcaagattcctgccaagagaattaatgaaaatgatcagaaaaagaaagaagccaaa
gagaatggtacctgggttcaactgaagcgccagcctcctccacccagaaaagcagacttt
gtgagaaccaatgggaaaaagcctgagctgctagaccctcttccttatgaattcatggca
tag

>gi568815586r:92044083_92245535|GENSCAN_predicted_peptide_7|313_aa
MLEQFYICTAQYGNHLATELILYGLLPCPLASGWVQPVKGSSGNLKGAVLLCLVDKFALA
PSGNLLKMQILEYYPRLNDPETQQRASDKPFSISGSDGWKENIIHLSLIKATVDALSEYL
SCLTPKKLAAIIQAVIQGSSLLHPHGCASSMLASKAAERKEQSTNLPLDENRLDPARNTD
PHQEQSFDFLLNDTCCITWDSFPSDPNVRSRLRFTGPSAIVSEAEHRIFEDEKCQSEPVG
GYTTEKTSVRGHSLGMRRENKFAALLQSSRITVAVQTMRGIRKGKAGLWQTTAHFIGRLE
EAVSDLRRAHGLV

>gi568815586r:92044083_92245535|GENSCAN_predicted_CDS_7|942_bp
atgctggaacagttctatatctgtactgcccaatatggtaaccacttagccacggagctg
atactctatggactgcttccttgccccctggcttctggttgggtccagccagtgaagggt
tctagtgggaacttgaaaggtgctgtgttactgtgcctagtggataagtttgccctagca
ccatctgggaacttattgaaaatgcaaattcttgagtactacccaagacttaatgatcca
gaaactcagcaacgtgcatctgacaagcccttcagcatttctggatctgatggctggaaa
gaaaatattatccatctctccttaattaaggcaacagtagatgctttatcagaatatcta
agttgtttaacgccaaagaagcttgctgctatcatccaagcagtgattcagggatccagt
ctcctacatcctcatggttgtgcatcttcaatgttagcatctaaagctgcagaaagaaaa
gagcagagcacgaatttgccgttggatgaaaacagacttgacccagcaaggaacacagat
ccacaccaggagcaaagttttgactttcttctgaacgatacctgctgtatcacttgggac
tcttttcccagtgatcctaatgtgaggtcaagattgagatttactggcccatctgccatt
gtcagtgaggcagaacatcgcatatttgaagatgaaaagtgccaatcagaaccagttggt
ggatacactactgaaaaaaccagcgttagaggccattctctgggaatgagaagagaaaat
aagtttgcagcccttttgcaatcatctaggatcacagttgcagtccaaacgatgaggggc
atccgaaagggaaaagctggcctatggcagaccacagcacattttataggcaggcttgag
gaggcagtatcggatttacgtagggcccatggattggtttga