GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:10:26

Sequence gi568815592f:27033072_27233461 : 200390 bp : 40.83% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6080   6336  257  0  2   56   86   215 0.797  14.34
 1.02 Intr +  12391  12634  244  0  1   78   44   227 0.626  13.45
 1.03 Intr +  12836  12958  123  0  0   53   31   103 0.594   0.74
 1.04 Intr +  17081  17239  159  0  0    8   33   212 0.084   6.74
 1.05 Term +  36089  36573  485  0  2   56   28   318 0.956  16.52
 1.06 PlyA +  37023  37028    6                               1.05

 2.08 PlyA -  37636  37631    6                               1.05
 2.07 Term -  42956  42759  198  2  0   47   54   148 0.809   3.72
 2.06 Intr -  59005  58817  189  1  0   99   22   185 0.355  11.86
 2.05 Intr -  59483  59382  102  2  0  127   54    27 0.528   2.65
 2.04 Intr -  64631  64556   76  1  1  104   75    17 0.368   0.60
 2.03 Intr -  80733  80628  106  1  1   84   38    57 0.006  -1.35
 2.02 Intr -  82055  81793  263  1  2   65   80   101 0.020   3.21
 2.01 Init -  99679  99303  377  1  2   36    4   566 0.046  39.45
 2.00 Prom -  99759  99720   40                              -6.05

 3.00 Prom +  99881  99920   40                             -15.49
 3.01 Init + 100001 100389  389  1  2   48   32   591 0.814  45.82
 3.02 Term + 100655 100937  283  2  1    1   49   319 0.733  13.21
 3.03 PlyA + 101180 101185    6                               1.05

 4.00 Prom + 101943 101982   40                              -7.55
 4.01 Sngl + 106238 106549  312  1  0   28   36   603 0.942  44.78
 4.02 PlyA + 107544 107549    6                               1.05

 5.02 PlyA - 107741 107736    6                               1.05
 5.01 Sngl - 113727 113347  381  0  0   88   37   634 0.926  54.22
 5.00 Prom - 113823 113784   40                              -4.65

 6.00 Prom + 114002 114041   40                              -2.65
 6.01 Sngl + 114058 114444  387  0  0   46   49   566 0.999  44.46
 6.02 PlyA + 115832 115837    6                              -0.45

 7.05 PlyA - 116061 116056    6                               1.05
 7.04 Term - 118062 117985   78  0  0   64   55    87 0.331  -0.22
 7.03 Intr - 124753 124609  145  0  1   56   81   106 0.278   6.06
 7.02 Intr - 125198 124882  317  2  2   40   87   209 0.575   9.94
 7.01 Init - 126050 126015   36  2  0   68   58    46 0.455  -2.32
 7.00 Prom - 127499 127460   40                              -3.95

 8.00 Prom + 130227 130266   40                              -6.65
 8.01 Init + 144030 144081   52  2  1   26   48   105 0.050   1.67
 8.02 Intr + 144476 144637  162  0  0   70   80   116 0.013   8.03
 8.03 Intr + 147065 147376  312  0  0   77   36   162 0.016   5.13
 8.04 Intr + 147965 148342  378  0  0   85  -17   170 0.363   0.21
 8.05 Intr + 148859 149029  171  0  0   79   63    55 0.430   1.09
 8.06 Intr + 149263 149474  212  2  2  101   88    60 0.470   5.01
 8.07 Intr + 149765 149940  176  1  2   40   29   136 0.054   0.72
 8.08 Intr + 154366 154499  134  1  2   96   89    58 0.460   6.07
 8.09 Intr + 155388 155630  243  1  0  -18   72   216 0.770   5.95
 8.10 Term + 155708 155820  113  0  2   54   49   141 0.985   4.54
 8.11 PlyA + 156874 156879    6                               1.05

 9.00 Prom + 169234 169273   40                              -2.55
 9.01 Sngl + 178416 178841  426  2  0   93   37   390 0.971  30.44
 9.02 PlyA + 183128 183133    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  99679  99299  381  1  0   36   41   570 0.934  43.02
S.002 Term - 172831 172717  115  0  1  114   40   117 0.913   6.56


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_1|422_aa
XGAAPGTVHQTLLYNGSGSLVDQKEADVSGWELGNDQPPSPWALAPSSSTSDKGPQTLLF
HCLPLTSSALDSPLPKPKAAPIHSCQALAAFLWGRARDLQPAMPDPPPHSVGSKPPRRAP
PPTPRAPSPIDHPSAEECGCTAQDWQAAPPAAPVRDPLGKASWAPESANLVGTWRTFVSS
SGIVNAPINTLSKRTNQLSVKWTNQQDVDSSRQTHTRLDVKTNTLAEEHTSTWMWRGCRE
HADRYRQACRPSTDRPNDLEFEGAAPGTVHQTLLYNGSGSLVDQKEADVSGWELGNDQPP
SPWALESSSSTSDRRPQNLLFHCLPLTSSALDSPLPKPKAAPIHSCQVHSPGESVQHASG
WLFWQSSTNQGLFIFPQVPVLMGNSHWCHNVNVIISDFAKGKGVLLYNVNPWVQLCPLPE
AR

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_1|1269_bp
naaggggcagctccaggcacagtgcatcaaacactgctgtacaatggctctggctccctt
gtggaccagaaagaagcagatgtttctggttgggagttgggaaatgatcagccaccttct
ccctgggccctggcaccttcctcttccacaagtgacaaaggacctcagactcttctcttt
cactgtctacccctgaccagctctgccctggacagtccccttccaaagccaaaggcagcc
ccaatccacagttgtcaggccttagctgccttcctgtggggcagggctcgggacctgcag
cccgccatgcctgaccctcccccgcactccgtgggctccaagcctccccgacgagcgccg
ccccctactccacgggcacccagtcccatcgaccacccaagcgctgaggagtgcgggtgc
acggcgcaggactggcaggcagctccacctgcggccccagtgcgggatccactgggtaaa
gccagctgggctcctgagtctgctaatctagtggggacgtggagaacttttgtgtctagc
tcagggattgtaaacgcaccaatcaacaccctgtcaaaacggaccaatcagctctctgta
aaatggaccaatcagcaggatgtggactctagcaggcagacacacacgcggctggacgtc
aagacaaacacattggcagaggaacacacaagcacctggatgtggagagggtgtcgagag
cacgctgacaggtaccggcaagcctgcaggccatcgaccgaccggccgaacgacttggag
tttgaaggggcagctccaggcacagtgcatcaaacactgctgtacaatggctctggctcc
cttgtggaccagaaagaagcagatgtttctggatgggagttgggaaatgatcagccacct
tctccctgggccctggaatcttcctcttccacaagtgacagaagacctcagaatcttctc
tttcactgcctacccctgaccagctctgccctggacagtccccttccaaagccaaaggca
gccccaatccacagttgtcaggtacactcacctggggagtctgtgcagcatgcctctggg
tggctgttctggcagagcagcaccaaccagggcctgtttatatttccccaagtcccagtg
ctcatgggcaactcccactggtgtcacaatgtcaatgtcataatttctgactttgccaaa
ggaaaaggggtccttctgtacaatgtcaatccctgggtacaactctgccctctccctgag
gctcgataa

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_2|436_aa
MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
KYTSANSGSCSDSCSGLLLLLNTAPALPVCSTGGASTLLYTAILGCSACGLVVLSAASTL
LYTVAVGFSAYGLALLCGAPALLYYAATLGCSMGVSGNFPTALEEKGGGNLKGKVTGLSG
LGRISGFSSPTVTFLSSLLPSPLSQARRRFCSHQLDEPGLAIFPRVNSQPWCYILPWEFH
TFSKRVIMHSVKHAHARAHELPTVFLSGFEKRQTEVGERSCSRINIPVSALRRSPDSVLA
CLDNSTVDVVKNTLDRVICKEKKFILEAGKSKVMGLASGKGFCSASRHGEKATRQENVDE
RGKKKQADWFYNNSLS

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_2|1311_bp
atgccagagccagcgaagtctgctcccgccccgaaaaagggctccaagaaggcggtgact
aaggcgcagaagaaagacggcaagaagcgcaagcgcagccgcaaggagagctattccatc
tatgtgtacaaggttctgaagcaggtccaccctgacaccggcatttcgtccaaggccatg
ggcatcatgaattcgtttgtgaacgacattttcgagcgcatcgcaggtgaggcttcccgc
ctggcgcattacaacaagcgctcgaccatcacctccagggagatccagacggccgtgcgc
ctgctgctgcctggggagttggccaagcacgccgtgtccgagggtactaaggccgtcacc
aagtacaccagcgctaattctggctcctgctctgactcctgctctggactgctcctgttg
ctgaacactgctcctgcccttcctgtctgttctactggtggagcatccactttgctgtac
actgctattctgggctgttctgcctgtgggttagttgtgctttctgcagcatccaccttg
ctgtacacagttgctgtaggcttctctgcctatgggttagccttgctttgtggagcaccc
gctttgctgtactatgctgctactctgggatgctctatgggagtcagtggtaatttccct
actgctcttgaagaaaagggaggtggaaatttgaaaggaaaagtaactggactctctgga
cttggaagaatttctgggtttagtagccccaccgtcaccttcctctcctctctattgccc
tctcccctttctcaggctcgaaggcgtttttgcagtcatcagttagacgaacctgggcta
gcaatattcccaagagtcaatagtcagccctggtgctatatacttccatgggaattccat
actttctcaaaacgcgtcatcatgcactcggttaaacacgcacacgcacgcgcgcacgag
ctgcccacggtcttcctttcggggtttgagaagagacagacagaggtgggagagcgcagc
tgcagccgcatcaacattccggtgtctgcccttagaagaagtccggattcagtactcgcc
tgcttagacaattctactgttgatgtggtgaaaaataccttagaccgggtaatttgtaaa
gaaaagaagtttattctggaggctgggaagtccaaggtcatgggactggcttctggcaag
ggtttttgttctgcatcacgacatggtgaaaaagcaacacgacaagagaatgtggatgaa
agagggaaaaagaagcaggctgactggttttataacaactcactctcatga

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_3|223_aa
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
TESHHKAKGKPLLNFKLNQCVSTEHQWLREFLKHFGPKELSPGLEFSRQLFHAGQGGMKK
SRRYVPGTVALRDVRRYQNSELLISKLPLLRELGGDAAARERG

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_3|672_bp
atgtctggacgtggcaagcagggaggcaaagcccgcgctaaggccaagactcgctcttct
agggccggtctccagttccccgtgggccgagtgcaccgcctgctccgcaaaggcaactat
gccgagcgggtcggggccggcgcgccggtgtatctggcagcggtgctggagtacctgacc
gccgagatcctggaactggcgggcaacgcggcccgcgacaacaagaagacccgcatcatc
ccgcgtcatctccaactggccatccgcaacgacgaggagctcaacaagctgctgggcaaa
gtcaccatcgcacagggcggtgtcctgcccaacattcaggccgtgctactgcccaaaaag
actgagagccaccacaaggcgaagggcaagccattacttaattttaaacttaatcagtgt
gtgtccacagagcaccagtggcttcgtgagttcttgaagcactttggcccaaaagagtta
tcgcccgggctagaatttagcagacagctgttccacgcgggccagggcggcatgaagaag
tcccgccgctacgtgcccggcacagtggccctgcgcgacgttcggcgctaccagaactcc
gagctgctgatcagcaagctgccgctcctgcgagagctcggcggtgacgccgctgcacga
gagcgaggctga

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_4|103_aa
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_4|312_bp
atgtcaggacgcggcaaaggaggtaagggcctggggaaagggggtgccaagcgccaccgc
aaggtgctgcgcgacaacatccagggtatcaccaagccagccattcggcgccttgctcgc
cgcggcggcgtgaagcgcatttctggcctcatctatgaggagacccgcggagtgttgaag
gtgttcctggagaacgtgatccgggacgccgtgacctacacggagcacgccaagcgcaag
acggtcaccgccatggacgtggtctacgcgctcaagcgccagggccgcaccctctatggc
ttcggcggctaa

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_5|126_aa
MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAM
GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
KYTSAK

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_5|381_bp
atgccggaaccagcgaagtccgctcccgcgcccaagaagggctcgaagaaagccgtgact
aaggcgcagaagaaggacggcaagaagcgcaagcgcagccgcaaggagagctactccgta
tacgtgtacaaggtgctgaagcaggtccaccccgacaccggcatctcctctaaggccatg
ggaatcatgaactccttcgtcaacgacatcttcgaacgcatcgcgggtgaggcttcccgc
ctggcgcattacaacaagcgctcgaccatcacctccagggagatccagacggccgtgcgc
ctgctgctgcccggggagttggccaagcacgccgtgtccgagggcaccaaggccgtcacc
aagtacaccagcgctaagtaa

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_6|128_aa
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK
TESHHKAK

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_6|387_bp
atgtctggacgtggcaagcaaggcggtaaagctcgcgccaaggccaagacccgctcttct
cgggctgggcttcagttccccgtgggccgagtgcaccgcctgctccgcaagggtaattat
gccgagcgggttggagccggcgcgccagtgtacctggctgcggtgctggagtacctgacc
gctgagatcctggagctggctggcaatgcggcccgcgacaacaagaagacccgtatcatc
ccgcgtcacctccaactggccatccgcaacgacgaggagctcaacaagctgctgggcaaa
gtcaccatcgcgcagggtggtgtcttgcccaatatccaggccgtgctgctgcctaagaag
actgagagccaccataaggccaaataa

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_7|191_aa
MLAMLVSNSRPQYVEKLRRRQGTAQYVEKLRRHQGTAVTRIRTEVAAATTQSTNHYTITA
RHQRPLLVGLFLCLFPRNVCFCHLKNGAVFRPYLHTYPVYFLIHSPSPIFCLWQRSQSLA
VWSSDLWQQKEEGAALKWTCQIPFFAKLVRIFGGLAWNLASRQVPENYSLQGMHDNDSIC
NRYEDEGEGRN

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_7|576_bp
atgttggccatgctggtctcgaactcccgacctcagtatgttgaaaaattgaggcgacgt
caaggtactgctcagtacgttgagaaattgaggcgacatcaaggtactgccgtgactcgg
attcgaaccgaggttgctgcggccacaacgcagagtactaaccactatacgatcacggca
cgccaccagaggccgctgcttgtggggctcttcctttgcttatttcccagaaacgtctgt
ttttgtcatctaaagaatggtgcagtctttcgtccttatttacacacctacccagtttac
ttccttatccactccccgtccccaatattttgcttatggcaaagaagccaaagtttagca
gtgtggtcctcagatctttggcaacaaaaggaagagggcgctgctttgaagtggacctgc
cagatcccattttttgccaaactagtcagaatcttcgggggcttggcatggaatctggca
tctcgacaggtgccagaaaattattccttacaaggaatgcatgacaacgactccatctgt
aataggtatgaagatgagggggaagggcggaactga

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_8|650_aa
MDRRGYGVRCKTEVYKRGEGLRTNQKAAPSLRSRPVPHGTNRRAAAGSQDRRVRRTRRVR
IPLCSLRPFQPGILFLGEERTMICKAAMIAWERKHPPRQNVLAAEHKFPAQDPQWDNNSA
AHRENMRDRDMIIKGIQESVPPTQNISQAFNVQQEKDEGPMEFLNRLKEQIRKYADLSCS
AEDLTVSGVKGEGFRAKILEETEVKYKNKSVATKFFLIPEAGTNLLGRDLMLRLGTGLYV
NQGKLLTSLNVLTTSEESRIHPNVWSKEGNRGWVPPIHVKLKTPGEIVKQKQYPIPLEAR
IGDNKDQVTAISVNFLNFLRGQGLRVSKNNIQFIESEVKYLGHLISKGERKIGSERIEEQ
PFHLFINVSKGVALGVLTQKHGGHRQPVVFLSKILDPVTRGWPECVQSIAATALLTEESR
KITFGGNLFVIEGKRHNGYSIVDRETLTVVESERLPNKWSAQICELFALNQALKSLQNQE
GTIYTYSNFPNPERLSSADPTGCQLFGLLDILLKIHWEKGLWGHKLAIKIWEIWSLVRAA
LEPFQTNDEAESEEEKEEFDNQDSETPLPSTSQKESPEVIYANPPSLPKPIQKLIQLRVP
QEECPEWPPPPQPIHYGEGVIQVRPAVHYSEGAISLKMDDPAPCLGRTVA

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_8|1953_bp
atggataggcgaggctacggagttcgatgtaaaaccgaagtttacaagcgaggtgaagga
ctcagaacaaaccaaaaagcagctccaagcttgcgatcgcggccagttcctcacggaacc
aaccgcagagccgccgcaggttcgcaggatcggagggttcggaggactcggagggtgcgg
attcctctctgctccttgagaccattccagccaggtattctcttcttaggagaggaaaga
accatgatctgcaaggctgctatgatagcctgggagcgcaagcacccccctcgtcagaat
gtccttgcagcagagcataaattcccggcccaggaccctcaatgggataacaacagtgcg
gctcaccgggaaaacatgagagatagggatatgataattaaagggattcaggaatcagtt
cctccaacccaaaacatttcccaagcatttaatgtacagcaagagaaagatgaagggccc
atggaattcttaaacagacttaaggaacagataagaaaatacgcagatttatcctgttca
gccgaagaccttactgtctcaggagttaaaggggaaggattcagagcaaaaattctagag
gaaaccgaagtcaaatataagaataagtcggttgctactaagttcttcttaattcctgaa
gcaggaactaatttattaggaagggacttaatgttaaggttaggcacaggcctatatgtt
aatcaaggaaaactccttacttccttaaacgtactcaccacttcagaagaaagccgcatc
catcccaacgtatggtcgaaagaagggaatcgaggatgggttcctccaatccatgtcaaa
ttaaaaactcctggggaaatagtgaaacaaaaacaataccctattcccttggaagccagg
ataggagataacaaggatcaagtaacagcaatttcagttaacttcctaaatttcctaagg
ggacaaggattacgggtctcaaagaacaacatccaattcatagaatctgaggtaaaatat
ctaggacacctaatcagtaaaggtgaacgaaagataggatccgaacgaattgaagaacag
ccattccatcttttcattaatgtaagcaaaggagtggccttaggggtactcacccaaaaa
catggaggccaccggcagcctgtagtctttctgtcaaaaatccttgacccagtaacccgt
ggatggcccgaatgtgttcaatccatagcagcaactgccttgctaacagaagaaagcagg
aaaataacctttgggggaaacctcttcgtcattgaaggaaaaaggcacaacgggtactcc
atagttgatagggaaaccctcacagtggtagagtcagaaagactgccaaataagtggtct
gcccaaatatgtgaactctttgcattaaaccaagccttaaaatccctgcagaatcaggaa
ggaactatttacacttactccaactttccaaaccctgagagattgagctctgctgaccca
acagggtgtcagctgtttgggttgctggacattctcttgaagatacattgggaaaaaggc
ttatggggccataaactggcaataaaaatatgggagatttggtcattggtgcgtgccgca
ctggagccatttcagacaaatgatgaggctgagtcagaggaggagaaggaggagtttgat
aatcaggactctgaaacgcctctaccgagtactagccaaaaggagagtccggaagtaatt
tatgccaatccccccagtcttcctaaacctattcagaaactcattcagctcagggttcct
caagaggaatgtccggaatggccacctcctcctcagccgattcattatggagagggggta
attcaggttcgccctgcagttcattacagtgaaggagcaatttcccttaaaatggatgac
ccagcgccctgtctgggtcgaacagtggcctaa

>gi568815592f:27033072_27233461|GENSCAN_predicted_peptide_9|141_aa
MAFISECGCTPSTSSASTGCCPVLGLTGSKQVWEVPLESPQGTVARILIGQVIMSIRTKL
QNKEHVIEALRRVKFKFPGRQKVHISKKGGFTKFDADEFEDMVAEKQLIPDGCGIKYIPD
RGPLDKGGLCIHEGFHCAASS

>gi568815592f:27033072_27233461|GENSCAN_predicted_CDS_9|426_bp
atggctttcatatccgagtgcggctgcaccccttccacgtcatctgcatcaacaggatgt
tgtcctgtgctgggactgacaggctccaaacaggtatgggaggtgcctttggaaagcccg
cagggcactgtggccaggattctcattggccaagttatcatgtccattcgcaccaagctg
cagaacaaggagcatgtgattgaggcccttcgcagggtcaagttcaagttccctggccgc
cagaaggtccacatttcaaagaaggggggcttcaccaagttcgatgcagatgaatttgaa
gacatggtggctgagaagcagctcatcccagatggctgtgggatcaagtacatccccgat
cgtggccctctggacaagggagggctttgcattcatgagggcttccactgtgctgcctcc
tcttaa