GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:20:00

Sequence gi568815588f:29597935_29798171 : 200237 bp : 43.36% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5106   5190   85  2  1   44   84    60 0.018   0.59
 1.02 Intr +  29545  29602   58  2  1   80   92    31 0.010   0.64
 1.03 Intr +  32664  32858  195  0  0   50   74    80 0.016   1.33
 1.04 Intr +  47163  47185   23  0  2   67  110    36 0.008   0.89
 1.05 Intr +  55398  55538  141  1  0   95   68    22 0.013   1.22
 1.06 Term +  65815  66002  188  2  2   91   38   138 0.965   6.75
 1.07 PlyA +  66396  66401    6                               1.05

 2.03 PlyA -  68160  68155    6                               1.05
 2.02 Term -  71861  71721  141  2  0   46   43   106 0.420  -0.17
 2.01 Init -  80624  80577   48  2  0   82   83    52 0.340   5.05
 2.00 Prom -  91092  91053   40                              -3.66

 3.00 Prom +  92739  92778   40                              -6.16
 3.01 Sngl + 100001 100240  240  1  0    8   48   239 0.429   6.98
 3.02 PlyA + 100718 100723    6                               1.05

 4.00 Prom + 101706 101745   40                              -5.06
 4.01 Init + 105601 105737  137  0  2   45   68    86 0.015   1.92
 4.02 Intr + 111524 111604   81  2  0   68   42    84 0.010   0.55
 4.03 Intr + 111686 111771   86  2  2   35  131    84 0.018   6.86
 4.04 Intr + 133782 133899  118  1  1   72  101     0 0.291  -0.78
 4.05 Intr + 137849 138092  244  2  1   71   35   147 0.212   5.20
 4.06 Intr + 144372 144449   78  2  0   77   36    97 0.102   3.15
 4.07 Intr + 167595 167684   90  2  0  132   56    13 0.417   2.69
 4.08 Term + 172714 172788   75  0  0  -21   46   255 0.514   8.24
 4.09 PlyA + 173435 173440    6                               1.05

 5.03 PlyA - 173571 173566    6                               1.05
 5.02 Term - 179401 179220  182  2  2  111   48   142 0.932  10.27
 5.01 Intr - 199414 199364   51  2  0   57   95    67 0.336   3.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  64020  64032   13  2  1  114   81     4 0.827   2.63
S.002 Term - 105748 105585  164  2  2   20   48   134 0.890   0.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:29597935_29798171|GENSCAN_predicted_peptide_1|229_aa
EDDNEGLLTILTTETRDSFPLLDVFCFGDKIFLLHREQGKHFFGLLGRQSSNNEVTDFMR
HTLISRLAKARVQKPHIQKPHRTCYRNTNVSACIVIDEGKKRRTYNTEHQLLLFLIALPS
AMQAVSASHSPSAMIVSFLRPLQPCFLYDLKIHQPIKPIFFMNYPVSVFHGHEPHAQQRD
AERLTGRQWAEQPLVLPVSAAGNQHIGNCKKMLTVKIATDAKGTSRRGS

>gi568815588f:29597935_29798171|GENSCAN_predicted_CDS_1|690_bp
gaagatgataatgaaggacttcttaccatcctgacgactgaaactcgagactccttcccc
ttgctggatgtgttttgctttggagataaaatcttcctcctgcaccgagagcagggaaaa
cacttctttggacttttggggaggcaaagttccaataatgaagtgactgacttcatgcgg
cacaccttaatttcccggttggcaaaagcacgtgtacagaaaccccatatacagaaaccc
catcggacttgttaccgcaacacgaacgtttctgcttgcattgtcatagatgaaggaaaa
aaaaggagaacttataacacagaacaccagcttctactgtttctcatcgcactgccctca
gccatgcaggctgtgtctgcttcccattcaccttctgccatgattgtaagtttcctgagg
cctctgcaaccatgcttcctatatgacctgaagatccatcagccaattaagcctattttc
tttatgaattacccagtctcagtgtttcatgggcatgagccccatgctcaacaaagagat
gcggaaagactgacagggaggcagtgggcagagcagccgctggttctcccggtgagtgct
gctggcaatcagcacatcggcaactgcaagaagatgctcacagtcaaaatagcaactgac
gccaagggcacatcaaggagagggagctaa

>gi568815588f:29597935_29798171|GENSCAN_predicted_peptide_2|62_aa
MDQYWFVACLEPAQQETAISIHFPAIQVAANLLRPNISISISINGTFVHSAAQSGHFSVP
PL

>gi568815588f:29597935_29798171|GENSCAN_predicted_CDS_2|189_bp
atggatcagtactggtttgtggcctgtttggaacctgcacagcaggagacagcaatatca
atacattttccagcaattcaggtggctgctaacctgcttcgtcccaacatctcgatctcc
atctccatcaacggcaccttcgttcactcagcggcccagtctggccacttctcagtgcct
ccactgtga

>gi568815588f:29597935_29798171|GENSCAN_predicted_peptide_3|79_aa
MSHKQIYYSDKYDDKEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQSQGWVHYMIH
EPEPHILLFRRPLPKKPKK

>gi568815588f:29597935_29798171|GENSCAN_predicted_CDS_3|240_bp
atgtcgcacaaacaaatttactattcggacaaatacgatgacaaggagtttgagtatcga
catgtcatgctgcccaaggacatagccaagctggtccctaaaacccatctgatgtctgaa
tctgaatggaggaatcttggcgttcagcagagtcagggatgggtccattatatgatccat
gaaccagaacctcacatcttgctgttccggcgcccactacccaagaaaccaaagaaatga

>gi568815588f:29597935_29798171|GENSCAN_predicted_peptide_4|302_aa
MHASSPCGGGSDKGPGLGPADSWNQQAGIRRIQTPTSRGILRIAFSCRYPSLPSFELREL
DVVNVSPLPADISLCLQQLAACGIPRGVTPVSFGSTLQVVPDYIWNNIDITETSKSLYND
YSLTKAPVFLPSLFTEQRQQMIAASRRQRLGGPDFSAAPRPRPASFPPRGERVPARDDSL
RSLPGGSRVPTPCDPRGGRELAPSAGPPGGSTLGLGKDRAERVWKQPKTLTRCSCIILDL
TAIKIMGQDTDYIDVVTAGTLCHPYANLALQPEQSQAHKKKKKKKKKKKKKKKKKKKKKT
TE

>gi568815588f:29597935_29798171|GENSCAN_predicted_CDS_4|909_bp
atgcacgccagcagcccctgtggcgggggctccgacaaagggcctggcctggggccagca
gactcgtggaaccagcaggcaggcatcagaaggatccagacaccaacgtccagggggatt
ctcaggattgccttcagctgcagatacccttctttgccttcctttgaattacgggagctg
gacgtggtcaatgtctctcctttgccagctgacatcagcttgtgcctgcagcagctagca
gcctgtggaatacccaggggcgtcaccccagtgagtttcggcagcaccctgcaggtggtt
cccgactatatctggaataacattgacataacagaaacaagtaagtctctttacaatgac
tacagtttaacaaaggcgcctgtctttttaccttccttgtttactgaacaaaggcagcaa
atgatcgccgcttcccgccgacagcggctcggcggccccgacttctcagcagcgccgcgg
ccacgccccgcctcgttcccaccgcgcggggagcgggtccccgctcgggatgattcactt
cgctccttacctggaggctcgcgcgtccccaccccttgcgacccgcgcggcggccgggag
ctggcgccctctgctgggccaccaggcgggagcaccctcggactgggcaaggatcgggcg
gagagggtgtggaagcagcccaaaaccctcaccagatgcagctgcataatcttggacttg
acagccatcaaaatcatgggccaagacactgattacatagacgtggtgacagcagggaca
ctctgccatccctatgctaacctggcattgcaacctgagcaaagccaggctcataagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagacg
acagagtag

>gi568815588f:29597935_29798171|GENSCAN_predicted_peptide_5|77_aa
XLKAEKSKMKALTDFVSEVKGRRENQLNSKSGWRDIIITRPQKGPEFSGFLQYHQKEHIC
HDISTFQSSWSRGFMVT

>gi568815588f:29597935_29798171|GENSCAN_predicted_CDS_5|234_bp
nttctgaaagctgagaagtccaagatgaaggcactgacagattttgtgtctgaggtcaaa
gggagaagagagaatcagctcaacagcaagagtggctggcgggacatcatcattacacgg
ccccagaaaggccctgagttctccggcttccttcaatatcaccagaaggagcacatctgt
cacgacatcagcactttccagagcagttggagcagagggtttatggtgacttga