GENSCAN 1.0	Date run:  8-Nov-116	Time: 05:04:16

Sequence gi568815586r:32647207_32855874 : 208668 bp : 40.59% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7692   7764   73  2  1   52   47   127 0.219   6.28
 1.02 Intr +  12872  12924   53  0  2   75  115    32 0.223   2.31
 1.03 Intr +  31996  32259  264  0  0  105   94   169 0.165  15.99
 1.04 Intr +  54209  54356  148  1  1   91   54   112 0.924   6.99
 1.05 Intr +  60161  60207   47  0  2   93   84    30 0.989   0.31
 1.06 Intr +  60947  61018   72  1  0   21  102   139 0.990   7.28
 1.07 Intr +  63723  63809   87  2  0   68  116    55 0.951   5.55
 1.08 Intr +  66003  66165  163  2  1   73   91   113 0.994   8.73
 1.09 Intr +  71437  71557  121  2  1   86   71   145 0.999  11.23
 1.10 Intr +  73458  73589  132  0  0   67   91   116 0.995   8.64
 1.11 Term +  75221  75431  211  2  1  102   42   162 0.955   8.78
 1.12 PlyA +  75802  75807    6                               1.05

 2.03 PlyA -  75964  75959    6                               1.05
 2.02 Term -  80141  79507  635  0  2  -16   50   611 0.250  40.36
 2.01 Init -  80791  80632  160  1  1   68   66    58 0.594   1.63
 2.00 Prom -  81241  81202   40                             -11.04

 3.00 Prom +  82708  82747   40                              -8.95
 3.01 Init +  83719  83928  210  0  0   48   74    -1 0.476  -6.67
 3.02 Intr +  84150  84305  156  2  0   47   97   127 0.923   8.79
 3.03 Intr +  84648  84737   90  2  0   57   89    74 0.922   3.67
 3.04 Intr +  86509  86601   93  0  0   84   84    63 0.957   4.74
 3.05 Intr +  89899  89955   57  0  0  102   93    30 0.873   3.06
 3.06 Intr +  92858  93034  177  1  0   38   91   188 0.927  13.29
 3.07 Intr +  93203  93312  110  1  2   63   92   127 0.999   8.76
 3.08 Intr +  95383  95542  160  1  1   81   67   130 0.947   9.27
 3.09 Term +  96148  96204   57  0  0   81   49    66 0.901  -1.29
 3.10 PlyA +  96387  96392    6                               1.05

 4.06 PlyA -  97180  97175    6                               1.05
 4.05 Term -  99673  99658   16  0  1  106   48    14 0.523  -4.07
 4.04 Intr - 102901 102731  171  0  0   81   90   124 0.709  10.04
 4.03 Intr - 103668 103513  156  2  0   83   62   256 0.997  20.70
 4.02 Intr - 106879 106712  168  0  0   57  113   137 0.997  11.24
 4.01 Init - 108668 107890  779  2  2  104  108   612 0.999  59.00
 4.00 Prom - 111716 111677   40                              -5.45

 5.12 PlyA - 111889 111884    6                               1.05
 5.11 Term - 126139 125951  189  1  0   29   49   155 0.503   2.17
 5.10 Intr - 145525 145438   88  0  1  112  116    74 0.996  11.65
 5.09 Intr - 149092 148903  190  2  1   66   85   139 0.931   9.12
 5.08 Intr - 155350 155197  154  1  1   22   97   192 0.471  12.22
 5.07 Intr - 158842 158713  130  0  1   63   53   115 0.182   5.28
 5.06 Intr - 162546 162452   95  0  2   93   86    67 0.244   4.84
 5.05 Intr - 174323 174150  174  2  0   47   81   232 0.969  17.61
 5.04 Intr - 175425 175261  165  0  0   87   61    79 0.497   4.34
 5.03 Intr - 176956 176839  118  0  1   79   86   132 0.217  11.65
 5.02 Intr - 193999 193822  178  2  1  107   90   161 0.916  16.26
 5.01 Intr - 203767 203560  208  1  1   71   72   229 0.696  17.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:32647207_32855874|GENSCAN_predicted_peptide_1|456_aa
MVNIETLTTNADKDVEQLELSLMVAHPPAVHPAPQASLRGSQRMACREGAGSRRARSNGC
RLPRRGRRRGGRRRTVGPGPIHCRGRRALGPRVFRVMEALIPVINKLQDVFNTVGADIIQ
LPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSQEDKRKTTGEENG
VEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTL
VDLPGMTKVPVGDQPKDIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVD
PDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRD
EYAFLQKKYPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGE
PVDDKSATLLQLITKFATEYCNTIEGTAKYIETSEL

>gi568815586r:32647207_32855874|GENSCAN_predicted_CDS_1|1371_bp
atggtcaacatcgagacactgaccacaaatgctgacaaggatgtggagcaactggaactc
tcgctcatggtagcacaccctcctgctgtccacccagctccacaggcttcactgagaggc
tctcagcgcatggcctgccgggagggggcaggtagccggcgggcccggtccaatgggtgc
cggcttccgaggagagggcggaggagaggaggaaggaggcgaactgtgggccccggcccc
attcattgccgtggccggcgggcactggggccccgtgttttcagagtcatggaggcgcta
attcctgtcataaacaagctccaggacgtcttcaacacggtgggcgccgacatcatccag
ctgcctcaaatcgtcgtagtgggaacgcagagcagcggaaagagctcagtgctagaaagc
ctggtggggagggacctgcttcccagaggtactggaattgtcacccggagacctctcatt
ctgcaactggtccatgtttcacaagaagataaacggaaaacaacaggagaagaaaatggg
gtggaagcagaagaatggggtaaatttcttcacaccaaaaataagctttacacggatttt
gatgaaattcgacaagaaattgaaaatgaaacagaaagaatttcaggaaataataaggga
gtaagccctgaaccaattcatcttaagattttttcacccaacgttgtcaatttgacactt
gtggatttgccaggaatgaccaaggtgcctgtaggtgatcaacctaaggatattgagctt
caaatcagagagctcattcttcggttcatcagtaatcctaattccattatcctcgctgtc
actgctgctaatacagatatggcaacatcagaggcacttaaaatttcaagagaggtagat
ccagatggtcgcagaaccctagctgtaatcactaaacttgatctcatggatgcgggtact
gatgccatggatgtattgatgggaagggttattccagtcaaacttggaataattggagta
gttaacaggagccagctagatattaacaacaagaagagtgtaactgattcaatccgtgat
gagtatgcttttcttcaaaagaaatatccatctctggccaatagaaatggaacaaagtat
cttgctaggactctaaacaggttactgatgcatcacatcagagattgtttaccagagttg
aaaacaagaataaatgttctagctgctcagtatcagtctcttctaaatagctacggtgaa
cccgtggatgataaaagtgctactttactccaacttattaccaaatttgccacagaatat
tgtaacactattgaaggaactgcaaaatatattgaaacttcggagctgtaa

>gi568815586r:32647207_32855874|GENSCAN_predicted_peptide_2|264_aa
MDVLAGSKTVQYANNMQYVMKDSKDVISFNLINLLLQIYPQCLLGHKAPKTDAARVVKRG
VNALKNLQVKGAQIEAKFYEEVHDLERKYAVLYQPLFDKQSEITNTIYEPTEEECEWKPD
EEDEISEELKEKAKTEDEKNDEEKEDPKGIPEFWLPVFKNVDLLSDMLQKHDEPILKHVK
DTKVKFSDAGLPMSFVLEFQFEPSKYFTNEVLTKTYRMRLEPEPDDSDHFSFDGQEIMGC
TGGQIDWKKGKNVILKTIKQQQKH

>gi568815586r:32647207_32855874|GENSCAN_predicted_CDS_2|795_bp
atggatgttcttgctggtagtaaaacagtacaatatgctaacaatatgcaatatgtaatg
aaagattctaaggatgttatatcctttaatctaataaacttacttctacaaatttatcct
cagtgtttacttggacacaaagccccaaagacagatgcagctagggtagttaaaagagga
gtgaatgctctcaaaaacctgcaagttaaaggtgcacagatagaagccaaattctatgag
gaagttcacgatcttgaaaggaagtatgctgttctctatcagcctctatttgataagcaa
tctgagattactaatacaatttatgaacctacagaggaagaatgtgaatggaaaccagat
gaagaagatgagatttcagaggagttgaaagaaaaggccaagactgaagatgagaaaaac
gatgaagaaaaagaagaccccaaaggaattcctgaattttggttacctgtttttaagaat
gttgacttgctcagtgatatgcttcagaaacatgatgaacctattctgaagcatgtgaaa
gataccaaagtgaagttctcagatgctggcctgcctatgagttttgtcttagaatttcaa
tttgaacccagtaaatattttacaaatgaagtgctgacaaagacatataggatgaggtta
gaaccagaaccagatgattctgatcacttttcctttgatggacaagaaattatgggttgt
acagggggccagatagattggaaaaaaggaaagaatgtcattttgaaaaccattaagcag
cagcagaaacactag

>gi568815586r:32647207_32855874|GENSCAN_predicted_peptide_3|369_aa
MSLKLLERLLTCIFFPFLQCQKPYTSLPFRCGGARICYIFHETFGRTLESVDPLGGLNTI
DILTAIRNATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYS
TQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHPDFADACGLMNN
NIEEQRRNRLARELPSAVSRDKVASGGGGVGDGVQEPTTGNWRGMLKTSKAEELLAEEKS
KPIPIMPASPQKGHAVNLLDVPVPVARKLSAREQRDCEVIERLIKSYFLIVRKNIQDSVP
KAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQII
AEIRETHLW

>gi568815586r:32647207_32855874|GENSCAN_predicted_CDS_3|1110_bp
atgagcttaaagcttctagaaagacttctaacttgtatcttctttccctttttgcaatgc
cagaaaccatatacttcattgcctttcagatgcggtggtgctagaatttgttatattttc
catgagacttttgggcgaaccttagaatctgttgatccacttggtggccttaacactatt
gacattttgactgccattagaaatgctactggtcctcgtcctgctttatttgtgcctgag
gtttcatttgagttactggtgaagcggcaaatcaaacgtctagaagagcccagcctccgc
tgtgtggaactggttcatgaggaaatgcaaaggatcattcagcactgtagcaattacagt
acacaggaattgttacgatttcctaaacttcatgatgccatagttgaagtggtgacttgt
cttcttcgtaaaaggttgcctgttacaaatgaaatggtccataacttagtggcaattgaa
ctggcttatatcaacacaaaacatccagactttgctgatgcttgtgggctaatgaacaat
aatatagaggaacaaaggagaaacaggctagccagagaattaccttcagctgtatcacga
gacaaggttgcatctggaggtggtggggttggagatggtgttcaagaaccaaccacaggc
aactggagaggaatgctgaaaacttcaaaagctgaagagttattagcagaagaaaaatca
aaacccattccaattatgccagccagtccacaaaaaggtcatgccgtgaacctgctagat
gtgccagttcctgttgcacgaaaactatctgctcgggaacagcgagattgtgaggttatt
gaacgactcattaaatcatattttctcattgtcagaaagaatattcaagacagtgtgcca
aaggcagtaatgcattttttggttaatcatgtgaaagacactcttcagagtgagctagta
ggccagctgtataaatcatccttattggatgatcttctgacagaatctgaggacatggca
cagcgcaggaaagaagcagctgatatgctaaaggcattacaaggagccagtcaaattatt
gctgaaatccgggagactcatctttggtga

>gi568815586r:32647207_32855874|GENSCAN_predicted_peptide_4|429_aa
MAAPILRSFSWGRWSGTLNLSVLLPLGLRKAHSGAQGLLAAQKARGLFKDFFPETGTKIE
LPELFDRGTASFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNVIALVGGATARLG
DPSGRTKEREALETERVRANARALRLGLEALAANHQQLFTDGRSWGSFTVLDNSAWYQKQ
HLVDFLAAVGGHFRMGTLLSRQSVQLRLKSPEGMSLAEFFYQVLQAYDFYYLFQRYGCRV
QLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGAKLGKSAGNAVWLNRDKTSPF
ELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKRLAAEVTKLVHGR
EGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTSVLDTCRKANAIP
DGPRGDEEQ

>gi568815586r:32647207_32855874|GENSCAN_predicted_CDS_4|1290_bp
atggcggcgcccatcttgcggtccttttcctggggccggtggtctggtaccctaaatctc
tcagtattgttgcccttggggctgcgtaaggcccactcgggcgctcaggggttactggca
gcgcagaaggctcgaggtctgttcaaggacttcttcccggagacggggacgaaaatagag
ctcccagagctcttcgaccgtggcacggcgagttttccccaaaccatttactgtggcttc
gaccccacggcagactcgcttcatgtgggtcatctacttgcgctgctgggcctgtttcat
ttgcagcgagcgggccacaacgtgatcgcgctggtgggaggcgccacggcgcgcctggga
gacccgagcggccgtaccaaggaacgcgaggcgctggagacagagcgcgtgcgagccaac
gcgcgagctctgcgcctagggcttgaggccctggcggctaatcaccagcagcttttcact
gatgggcgctcctggggcagcttcactgtgctggacaactcggcctggtaccagaagcag
cacctggtggacttcctggcggcagtggggggtcacttccgcatggggacgctgctgagc
cggcagagcgtgcagctgcggctcaagagccccgagggcatgagcttggccgagttcttt
taccaggtgctccaggcctatgacttctattacctcttccagcgttatggatgcagggtc
cagctgggcggatctgatcaactaggcaacatcatgtccggatatgagttcatcaacaag
ttgactggagaagatgtatttggaatcaccgttcctctaattacaagtacaactggagca
aagctgggaaagtctgctggcaacgctgtttggctaaacagagataagacatctccattt
gaattgtatcaattctttgtcaggcaaccggacgattcagtggaaaggtacctgaagctg
ttcactttcctgccccttccagagattgatcatatcatgcagctgcatgtcaaagagcca
gaaaggcggggtcctcagaaacgactggcagcagaagtaacaaagcttgttcatggacga
gaaggattggattctgctaaaaggtgtacacaagccctttatcacagtagcatagatgca
ctggaggtcatgtctgatcaggagttaaaagagttgtttaaagaagctccattttctgaa
ttttttctcgatcctggaacaagtgtcctagatacttgccgcaaagcaaatgccattcca
gatggtccccgaggtgatgaggaacaatga

>gi568815586r:32647207_32855874|GENSCAN_predicted_peptide_5|562_aa
VNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTR
DLETKKQITGLLWNLSSNDKLKNLMITEALLTLTENIIIPFSGWPEGDYPKANGLLDFDI
FYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGTIADYQPDDKATENCVCILHNL
SYQLEAELPEKYSQNIYIQNRNIQTDNNKSIGCFGSRSRKVKEQYQDVPMPEEKSNPKGV
EWLWHSIVIRMYLSLIAKSVRNYTQEASLGALQNLTAGSGPIFATCGSGDPLMSPRYQGL
GSNKQSCAESQHRMQGWFNIRKSINVIHHINRTTDKNHMISIDAEKAFDKIRHRFMMPTS
VAQTVVQKESGLQHTRKMLHVGDPSVKKTAISLLRNLSRNLSLQNEIAKETLPDLVSIIP
DTVPSTDLLIETTASACYTLNNIIQNSYQNARDLLNTGGIQKIMAISAGDAYASNKASKA
ASVLLYSLWAHTELHHAYKKPISYPHYTAPPIQRDSHPNPLRPVKLQSRTRASRVGMDQL
SEKGDMWLAGLSPAAQRSKCKC

>gi568815586r:32647207_32855874|GENSCAN_predicted_CDS_5|1689_bp
gttaaccagcttcgtggcatcctcaagcttctgcagctcctaaaagttcagaatgaagac
gttcagcgagctgtgtgtggggccttgagaaacttagtatttgaagacaatgacaacaaa
ttggaggtggctgaactaaatggggtacctcggctgctccaggtgctgaagcaaaccaga
gacttggagactaaaaaacaaataacaggtttgctgtggaatttgtcatctaatgacaaa
ctcaagaatctcatgataacagaagcattgcttacgctgacggagaatatcatcatcccc
ttttctgggtggcctgaaggagactacccaaaagcaaatggtttgctcgattttgacata
ttctacaacgtcactggatgcctaagaaacatgagttctgctggcgctgatgggagaaaa
gcgatgagaagatgtgacggactcattgactcactggtccattatgtcagaggaaccatt
gcagattaccagccagatgacaaggccacggagaattgtgtgtgcattcttcataacctc
tcctaccagctggaggcagagctcccagagaaatattcccagaatatctatattcaaaac
cggaatatccagactgacaacaacaaaagtattggatgttttggcagtcgaagcaggaaa
gtaaaagagcaataccaggacgtgccgatgccggaggaaaagagcaaccccaagggcgtg
gagtggctgtggcattccattgttataaggatgtatctgtccttgatcgccaaaagtgtc
cgcaactacacacaagaagcatccttaggagctctgcagaacctcacggccggaagtgga
ccaatctttgcaacttgtggatcaggagatcccctcatgagcccacgctaccagggcctt
gggtccaataaacagagctgtgcggagtctcagcacaggatgcaaggttggttcaacatt
cgcaaatcaataaacgtgattcatcacataaacagaactacagacaaaaaccacatgatc
tcaatagatgcagaaaaggcctttgataaaattcgacatcgcttcatgatgccgacatca
gtggctcagacagttgtccagaaggaaagtggcctgcagcacacccgaaagatgctgcat
gttggtgacccaagtgtgaaaaagacagccatctcgctgctgaggaatctgtcccggaat
ctttctctgcagaatgaaattgccaaagaaactctccctgatttggtttccatcattcct
gacacagtcccgagtactgaccttctcattgaaactacagcctctgcctgttacacattg
aacaacataatccaaaacagttaccagaatgcacgcgaccttctaaacaccgggggcatc
cagaaaattatggccattagtgcaggcgatgcctatgcctccaacaaagcaagtaaagct
gcttccgtccttctgtattctctgtgggcacacacggaactgcatcatgcctacaagaag
cccatttcttacccgcactatacagctcccccgattcagagggactctcatccgaaccct
ctcaggccagtcaagctgcagagcaggacaagggcttcaagggttggcatggaccagctc
tcagagaaaggagacatgtggttagcaggactttcaccagcagcgcagagatcaaaatgc
aagtgttga