GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:29:28

Sequence gi568815592r:158666917_158889371 : 222455 bp : 46.11% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   9062   9715  654  1  0   86   54   179 0.915  10.49
 1.02 PlyA +  10627  10632    6                               1.05

 2.00 Prom +  23694  23733   40                              -5.36
 2.01 Init +  36308  36468  161  1  2   61   28   216 0.511  10.25
 2.02 Intr +  41406  41475   70  0  1   84   59    85 0.982   4.38
 2.03 Intr +  46154  46291  138  1  0   82   64    61 0.930   3.76
 2.04 Intr +  46884  46962   79  2  1  101  106    58 0.814   8.02
 2.05 Intr +  51171  51295  125  1  2  101   42    75 0.501   4.50
 2.06 Intr +  58587  58721  135  2  0  113   94   -33 0.001   0.56
 2.07 Intr +  78564  78742  179  2  2   75   94   136 0.005  11.62
 2.08 Intr +  85012  85114  103  1  1  117   75   104 0.965  12.18
 2.09 Intr +  90295  90465  171  0  0  124   59   216 0.867  22.44
 2.10 Intr +  93724  93829  106  0  1   93   86    63 0.905   6.39
 2.11 Term +  97579  97688  110  2  2  111   44    31 0.714  -0.33
 2.12 PlyA +  97934  97939    6                               1.05

 3.19 PlyA -  98305  98300    6                               1.05
 3.18 Term - 100162  99998  165  1  0   49   42   384 0.999  27.82
 3.17 Intr - 100596 100345  252  0  0   38   81   576 0.957  49.53
 3.16 Intr - 102502 102410   93  1  0   87   96   128 0.948  13.66
 3.15 Intr - 103028 102868  161  0  2   96   62   230 0.998  20.91
 3.14 Intr - 103978 103848  131  0  2   80   55   244 0.999  20.64
 3.13 Intr - 104491 104328  164  1  2   76   89   238 0.999  21.47
 3.12 Intr - 109588 109492   97  0  1   93   95    90 0.983  10.21
 3.11 Intr - 116750 116604  147  1  0   69   78   137 0.991  10.15
 3.10 Intr - 117811 117728   84  0  0   94   89    72 0.991   6.84
 3.09 Intr - 118718 118393  326  2  2   -4  105   438 0.953  30.87
 3.08 Intr - 122455 122372   84  1  0  105   77   117 0.965  12.32
 3.07 Intr - 128916 128798  119  1  2  104   54    31 0.668   1.48
 3.06 Intr - 151250 151166   85  2  1   69  100   156 0.864  14.29
 3.05 Intr - 167997 167879  119  1  2   78   57    66 0.262   2.68
 3.04 Intr - 169181 169077  105  0  0   82   42    60 0.152   0.99
 3.03 Intr - 175223 174963  261  0  0   49    4   238 0.020   8.96
 3.02 Intr - 201438 201390   49  0  1   46  101    58 0.130   1.15
 3.01 Init - 203593 203516   78  1  0   90   92    46 0.725   6.26
 3.00 Prom - 208085 208046   40                              -1.76

 4.03 PlyA - 208293 208288    6                               1.05
 4.02 Term - 220189 219387  803  2  2   79   43   270 0.444  15.01
 4.01 Init - 221750 221693   58  2  1   42   94    36 0.555   1.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  78600  78742  143  2  2   81   94   127 0.993  12.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:158666917_158889371|GENSCAN_predicted_peptide_1|217_aa
MAILPKVIYIPIKLPMTFFTELEKTTFKFIWNQKRACIAKSILSQKNKAGGITLPDFKLY
YKATVTKTTWYCYQNRDIDQWNRTEPSEIMLHIYNYLIFDKPDKNKQWGKDSLFNKWCWE
NWLAICRKLKLDPFLTPYTKINSTWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDFMSKT
PKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTE

>gi568815592r:158666917_158889371|GENSCAN_predicted_CDS_1|654_bp
atggccatactgcccaaggtaatttatatccccatcaagctaccaatgactttcttcaca
gaattggaaaaaactactttcaagttcatatggaaccaaaaaagagcctgcattgccaag
tcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatac
tacaaggctacagtaaccaaaacaacatggtactgttaccaaaacagagatatagaccaa
tggaacagaacagagccctcagaaataatgttgcatatctacaactatctgatctttgac
aaacctgacaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaa
aactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaa
attaattcaacatggattaaagacttaaatgttagacctaaaaccataaaaaccctagaa
gaaaacctaggcaataccattcaggacataggcatgggcaaggacttcatgtctaaaaca
ccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagc
ttctgcacagcaaaagaaaccaccatcagagtgaacaggcaacctacagaatga

>gi568815592r:158666917_158889371|GENSCAN_predicted_peptide_2|458_aa
MLRAVPGRHGCQPAMCLRQALAASDLGPGLQLFLSLAKTGIPAKVTRQPDRAGCKISVVP
PTPPPVSESQCSRSPGRFQTETGVTFKILLYFLLEISNSPESFQYLRAHDVFIGQMDDWM
GGNLQEFGQFRGFNKSVENLFLSLATHVKKLSKSQNDMTSEKHLLATGPRQCVGQTERRS
QSDTAVNVTTRKVSAPDILKPLNQEDPKCSTNPILKQQNLPSSPAPSTIFSGGFRHGSLI
SIDSTCTEMGNFDNANVTGEIEFAIHYCFKTHSLEICIKACKNLAYGEEKKKKCNPYVKT
YLLPDRSSQGKRKTGVQRNTVDPTFQETLKYQVAPAQLVTRQLQVSVWHLGTLARRVFLG
EVIIPLATWDFEDSTTQSFRWHPLRAKAEKYEDSVPQSNGELTVRAKLVLPSRPRKLQEA
QEEGDTAVGGDACSLSKLQWQKVLSSPNLWTDMTLVLH

>gi568815592r:158666917_158889371|GENSCAN_predicted_CDS_2|1377_bp
atgctccgcgccgtgcctggcagacacggctgccaaccagccatgtgcctgagacaagcc
ctggcagcctcagacctgggccctggcctgcagctgttcctgtccctggcaaagacgggt
atccctgctaaagtcactcgccagccagaccgggcagggtgcaaaatttctgtggttcct
cctactccacctcctgtcagcgagagccagtgcagccgcagtcctggcaggtttcaaact
gagactggggtgaccttcaaaatcctgctctactttctcctggaaatttcaaattctcca
gagtcgttccagtacctacgtgctcatgatgtatttattggacagatggatgattggatg
ggtggtaatttacaggaatttggtcagtttagaggatttaataagtccgtggaaaatttg
tttctgtctcttgctacccacgtgaaaaagctctccaaatcccagaatgatatgacttct
gagaagcatcttctcgccacgggccccaggcagtgtgtgggacagacagagagacggagc
cagtctgacactgcggtcaacgtcaccaccaggaaggtcagtgcaccagatattctgaaa
cctctcaatcaagaggatcccaaatgctctactaaccctattttgaagcaacagaatctc
ccatccagtccggcacccagtaccatattctctggaggttttagacacggaagtttaatt
agcattgacagcacctgtacagagatgggcaattttgacaatgctaatgtcactggagaa
atagaatttgccattcattattgcttcaaaacccattctttagaaatatgcatcaaggcc
tgtaagaaccttgcctatggagaagaaaagaagaaaaagtgcaatccgtatgtgaagacc
tacctgttgcccgacagatcctcccagggaaagcgcaagactggagtccaaaggaacacc
gtggacccgacctttcaggagaccttgaagtatcaggtggcccctgcccagctggtgacc
cggcagctgcaggtctcggtgtggcatctgggcacgctggcccggagagtgtttcttgga
gaagtgatcattcctctggccacgtgggactttgaagacagcacaacacagtccttccgc
tggcatccgctccgggccaaggcggagaaatacgaagacagcgttcctcagagtaatgga
gagctcacagtccgggctaagctggttctcccttcacggcccagaaaactccaagaggct
caagaagagggagacacagctgttggcggggatgcatgctcactatcgaagctccagtgg
cagaaagtcctttccagccccaatctatggacagacatgactcttgtcctgcactga

>gi568815592r:158666917_158889371|GENSCAN_predicted_peptide_3|839_aa
MVTGYYLHLKDGESLRFPDVFSVTDWWVRGLSDFKNEATDLRVLECPNLKLKKPPWLQVL
SAMIVYALMVVSYFLVTGGIIYDVIVEPPSIGSMTDEHGHQRPVAFLAYRVNEQCIMEGL
ASSFLFTIGASRMGVVPGPSFSLTAQSAQPSLAPAGPVLSYVVEEALEWKQGFLYDSLSG
WGCPDGKAMLPGYSHDRQAGPSSWVGTASSLLLDSRVFGDRGYSPETENAETMIPKFGLL
KITCGSDSFLGCGCLKSFCGDSDGEADVGSTVINVRVTTMDAELEFAIQPNTTGKQLFDQ
WAFVFRICVESVACFVQVSAQEVRKENPLQFKFRAKFYPEDVAEELIQDITQKLFFLQVK
EGILSDEIYCPPETAVLLGSYAVQAKFGDYNKEVHKSGYLSSERLIPQRVMDQHKLTRDQ
WEDRIQVWHAEHRGMLKDNAMLEYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDALGLNI
YEKDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGN
HELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEEL
MLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQA
VDQIKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEELHLVM
TAPPPPPPPVYEPVSYHVQESLQDEGAEPTGYSAELSSEGIRDDRNEEKRITEAEKNERV
QRQLLTLSSELSQARDENKRTHNDIIHNENMRQGRDKYKTLRQIRQGNTKQRIDEFEAL

>gi568815592r:158666917_158889371|GENSCAN_predicted_CDS_3|2520_bp
atggtgaccggctattatctgcatcttaaagatggggaaagtttgaggtttcctgatgtg
ttcagcgtcacagactggtgggttcgtggtctcagtgacttcaagaatgaagccacagac
cttcgcgtgctcgaatgtcccaacctgaagctgaagaagccgccctggctgcaagtgctg
tcggccatgattgtgtatgctctgatggtggtgtcttacttcctcgtcactggaggaata
atttatgatgttattgttgaacctccaagcattggctctatgactgatgaacacgggcat
cagaggccagtagctttcttggcctacagagtaaatgaacaatgtattatggaaggactt
gcatccagcttcctgtttacaataggagcttcacggatgggcgtggttccaggtcctagc
ttctccctgactgcccagtctgcccagccttccttggctccagcaggccctgtcctgagc
tatgtcgttgaagaggccttggagtggaaacaagggttcttgtatgactccctgagtggc
tggggatgtccagatggcaaggctatgctgcccggttactcacacgacaggcaagctggg
ccatcgtcctgggttgggacagcgtcttcgctgctgctggatagtcgtgttttcggggat
cgaggatactcaccagaaaccgaaaatgccgaaaccatgattcccaaatttggcctcctc
aaaatcacttgtggaagtgacagcttcctgggctgcgggtgtttgaaaagcttctgtggg
gattctgatggtgaggctgatgtgggaagcactgtgatcaatgtccgagttaccaccatg
gatgcagagctggagtttgcaatccagccaaatacaactggaaaacagctttttgatcag
tgggccttcgtcttccggatttgtgtggagagtgtggcttgtttcgtgcaggtgtctgcc
caggaggtcaggaaggagaatcccctccagttcaagttccgggccaagttctaccctgaa
gatgtggctgaggagctcatccaggacatcacccagaaacttttcttcctccaagtgaag
gaaggaatccttagcgatgagatctactgcccccctgagactgccgtgctcttggggtcc
tacgctgtgcaggccaagtttggggactacaacaaagaagtgcacaagtctgggtacctc
agctctgagcggctgatccctcaaagagtgatggaccagcacaaacttaccagggaccag
tgggaggaccggatccaggtgtggcatgcggaacaccgtgggatgctcaaagataatgct
atgttggaatacctgaagattgctcaggacctggaaatgtatggaatcaactatttcgag
ataaaaaacaagaaaggaacagacctttggcttggagttgatgcccttggactgaatatt
tatgagaaagatgataagttaaccccaaagattggctttccttggagtgaaatcaggaac
atctctttcaatgacaaaaagtttgtcattaaacccatcgacaagaaggcacctgacttt
gtgttttatgccccacgtctgagaatcaacaagcggatcctgcagctctgcatgggcaac
catgagttgtatatgcgccgcaggaagcctgacaccatcgaggtgcagcagatgaaggcc
caggcccgggaggagaagcatcagaagcagctggagcggcaacagctggaaacagagaag
aaaaggagagaaaccgtggagagagagaaagagcagatgatgcgcgagaaggaggagttg
atgctgcggctgcaggactatgaggagaagacaaagaaggcagagagagagctctcggag
cagattcagagggccctgcagctggaggaggagaggaagcgggcacaggaggaggccgag
cgcctagaggctgaccgtatggctgcactgcgggctaaggaggagctggagagacaggcg
gtggatcagataaagagccaggagcagctggctgcggagcttgcagaatacactgccaag
attgccctcctggaagaggcgcggaggcgcaaggaggatgaagttgaagagtggcagcac
agggccaaagaagcccaggatgacctggtgaagaccaaggaggagctgcacctggtgatg
acagcacccccgcccccaccaccccccgtgtacgagccggtgagctaccatgtccaggag
agcttgcaggatgagggcgcagagcccacgggctacagcgcggagctgtctagtgagggc
atccgggatgaccgcaatgaggagaagcgcatcactgaggcagagaagaacgagcgtgtg
cagcggcagctgctgacgctgagcagcgagctgtcccaggcccgagatgagaataagagg
acccacaatgacatcatccacaacgagaacatgaggcaaggccgggacaagtacaagacg
ctgcggcagatccggcagggcaacaccaagcagcgcatcgacgagttcgaggccctgtaa

>gi568815592r:158666917_158889371|GENSCAN_predicted_peptide_4|286_aa
MTSGPQTNQPKEHLTNFKLDERESFSLAQSRADNRRLHEPDLLEGIRAVPREDPQWNYQA
DSPGTAGQDYMVSCLVEGLKKAAYKAGNYDELKETTRGKDENPAQVMARLAATLRRFTAL
DPQGPEGRLILNIRFITQSAPDMRKKLQKLEPGPQIPQQELINLAFKVHNNREEVARQQH
ISELQLLDSSGRQPTTTSPAYKNFRTSKPQLPGVLQNILVDLASNAKSLATGPQNAHSLG
FLLSHALSVRAPTGGRTVRLTSLPLLKPLEPKPNVPWPTPSQISSA

>gi568815592r:158666917_158889371|GENSCAN_predicted_CDS_4|861_bp
atgacctcaggtcctcagaccaaccagcccaaggaacatctcaccaatttcaaattggat
gaacgggaaagtttttctctagcccagtctcgtgctgataaccgccggcttcatgagcca
gacctcctggaaggcattagagcagttccccgagaggatccccagtggaactatcaggca
gattccccaggtacagctgggcaagattacatggtttcctgcctagttgaagggcttaaa
aaggcagcttacaaagctggtaattatgacgaacttaaggaaactacccgaggtaaagac
gaaaacccagcccaggtcatggcccgcttggcagctacccttagacgctttaccgcccta
gacccacaggggccagaaggccgccttattctcaatatacgttttatcacccagtcagct
cctgacatgagaaaaaagcttcaaaaattggaacccggccctcaaatcccacaacaggaa
ttaatcaacctcgccttcaaggtgcacaataatagagaggaggtagccagacagcaacac
atttctgagttacagctacttgactcctctggaagacaacccacaaccacgtctccagca
tacaagaacttcaggacatccaagccacagctcccaggggttcttcaaaacatcctcgtg
gaccttgcttcaaatgccaaaagcctggccactgggcctcagaatgcccacagcctggga
ttcctcctaagccatgccctgtctgtgcgggcccccactggaggtcggactgtccgactc
acatcactgccactcctaaagcccctggagcccaaacccaatgttccttggccgactcct
tcccagatctcctcggcttag