GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:31:18

Sequence gi568815595f:186684429_186889266 : 204838 bp : 43.78% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2901   2982   82  2  1  107   48    49 0.521   2.01
 1.02 Intr +   5498   5643  146  0  2   91    0   162 0.590   7.70
 1.03 Intr +   7337   7427   91  1  1   86   75     0 0.599  -1.93
 1.04 Intr +   7645   7893  249  2  0    3   77   335 0.370  21.31
 1.05 Intr +   9067   9087   21  2  0  118  111   -14 0.404   1.42
 1.06 Intr +  11817  11927  111  1  0   82  100    -3 0.116   0.65
 1.07 Intr +  17663  17808  146  0  2   91  -19   178 0.155   7.40
 1.08 Intr +  25873  25937   65  0  2   92   64    52 0.239   0.72
 1.09 Intr +  33150  33309  160  0  1  102  113   145 0.947  18.39
 1.10 Intr +  35677  35787  111  0  0   87   92   114 0.997  12.28
 1.11 Intr +  38009  38143  135  1  0  130   39    97 0.782   9.76
 1.12 Intr +  38286  38490  205  2  1   81   94    35 0.632   2.17
 1.13 Intr +  40660  40832  173  2  2   45   72   158 0.924   9.56
 1.14 Intr +  47117  47201   85  1  1   55  110    87 0.993   6.99
 1.15 Intr +  48074  48246  173  0  2   78   89   149 0.997  13.66
 1.16 Intr +  54671  54778  108  1  0   72   69    87 0.977   5.68
 1.17 Term +  57094  57903  810  0  0   66   28   406 0.985  25.59
 1.18 PlyA +  58259  58264    6                               1.05

 2.00 Prom +  59050  59089   40                              -4.96
 2.01 Init +  63983  64030   48  1  0   94  119    -8 0.793   3.85
 2.02 Intr +  68913  68945   33  2  0  127   72     3 0.644   1.02
 2.03 Intr +  69623  69695   73  1  1  105  115    18 0.975   5.18
 2.04 Intr +  77012  77185  174  0  0   40   54   149 0.471   6.61
 2.05 Intr +  79766  79790   25  0  1  116   52    -7 0.417  -4.42
 2.06 Intr +  84812  84875   64  2  1   83   96    29 0.569   1.92
 2.07 Term +  87996  88421  426  2  0   93   44   253 0.945  16.70
 2.08 PlyA +  94612  94617    6                               1.05

 3.00 Prom +  99116  99155   40                               0.74
 3.01 Init + 100026 100049   24  2  0   63   94    37 0.882   1.34
 3.02 Intr + 100136 100268  133  1  1   74   93   125 0.998  11.82
 3.03 Intr + 100534 100673  140  2  2   86   72    88 0.824   7.18
 3.04 Intr + 102074 102217  144  1  0   62   78   103 0.965   7.18
 3.05 Intr + 102699 102836  138  2  0   72   99   135 0.999  13.66
 3.06 Intr + 103067 103156   90  1  0   48  111    59 0.952   4.39
 3.07 Intr + 103375 103454   80  0  2   75   94     6 0.966  -1.75
 3.08 Term + 104697 104841  145  0  1   89   31   122 0.975   3.98
 3.09 PlyA + 105316 105321    6                               1.05

 4.10 PlyA - 105490 105485    6                               1.05
 4.09 Term - 105636 105541   96  0  0   75   39    74 0.959  -0.83
 4.08 Intr - 105827 105714  114  2  0   55   97    96 0.955   7.84
 4.07 Intr - 105978 105898   81  0  0   54   98    76 0.966   5.03
 4.06 Intr - 107422 107297  126  1  0   99   78    62 0.990   7.18
 4.05 Intr - 108182 108062  121  1  1  100   76    89 0.983   9.40
 4.04 Intr - 108519 108376  144  2  0   53   88    85 0.800   4.40
 4.03 Intr - 110353 110230  124  2  1   12   89   104 0.445   2.54
 4.02 Intr - 122556 122320  237  1  0   41  115   139 0.887   9.49
 4.01 Init - 126381 126312   70  0  1   81  105    61 0.912   8.31
 4.00 Prom - 131086 131047   40                              -5.06

 5.00 Prom + 131398 131437   40                              -4.16
 5.01 Init + 133204 133262   59  0  2   51   77    69 0.394   2.88
 5.02 Intr + 140553 140782  230  0  2   72   38   107 0.291   1.61
 5.03 Intr + 142124 142194   71  0  2   71  105   120 0.151  10.90
 5.04 Intr + 142619 142716   98  1  2   48   92    64 0.712   1.61
 5.05 Term + 142789 143134  346  1  1   88   39   167 0.889   5.77
 5.06 PlyA + 144837 144842    6                               1.05

 6.00 Prom + 166227 166266   40                              -5.96
 6.01 Init + 168610 168844  235  0  1   46  110   203 0.749  14.60
 6.02 Term + 169756 170276  521  2  2   80   43   645 0.999  53.66
 6.03 PlyA + 172428 172433    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:186684429_186889266|GENSCAN_predicted_peptide_1|956_aa
ENATVYYLALDVQESDCRVLSRKHWNDFSSALANTKDSPVLLDSLKDTELYRKQANKALV
KYKGENDDFPSFGVDQTCTIMNCVQPHLTYPLHPGGREHSPIAKPPLSFILMTIIPMDTI
SKDPVPMHTTTMAVIALTMDPVTHHPIAKVPKVTIAIATAHHLGTQKDEVKVKDTVPSIA
NCICVRTPSPKDSLVSGMEQDPSVMQILGPAIRQSRLEDLFYGQLLHRKAWMKVSSALAN
TKDSPVLLDSLKDTELYRKQANKALVKYKGENDDFPSFGVDQTFYVIMAKKAMNLCKYSV
DFHRLLLSLTQESQSEEIDCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRITEATKTVGS
DTFYSFKYEIKEGDCPVQSGKTWQDCEYKDAAKAATGECTATVGKRSSTKFSVATQTCQI
TPGGWFILWHCPGGKLTISDYPNSSRVLHCTQCVQGLNRRTRRHKTCPPLQAASQIEERI
GFEGRPGLESFRAPCLLASPFPCLEKGAEGPVVTAQYDCLGCVHPISTQSPDLEPILRHG
IQYFNNNTQHSSLFMLNEVKRAQRQDTGECTDNAYIDIQLRIASFSQNCDIYPGKDFVQP
PTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYFI
DFVARETTCSKESNEELTESCETKKLGISLMKRPPGFSPFRSSRIGEIKEETTVSPPHTS
MAPAQDEERDSGKEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHEQQ
HGLGHGHKFKLDDDLEHQGGHVLDHGHKHKHGHGHGKHKNKGKKNGKHNGWKTEHLASSS
EDSTTPSAQTQEKTEGPTPIPSLAKPGVTVTFSDFQDSDLIATMMPPISPAPIQSDDDWI
PDIQIDPNGLSFNPISDFPDTTSPKCPGRPWKSVSEINPTTQMKESYYFDLTDGLS

>gi568815595f:186684429_186889266|GENSCAN_predicted_CDS_1|2871_bp
gaaaatgcaactgtgtattatttagccttagatgttcaagaatctgactgccgggtccta
tccaggaaacactggaatgacttctcttcagcattggccaataccaaggatagtcccgtc
ctcttagattccctcaaggataccgagctctacagaaaacaagccaacaaagcccttgtg
aagtataaaggagagaatgatgactttccctctttcggagtggaccaaacatgtacgatc
atgaattgcgtgcaaccccatttgacctatccgctccatcctggtgggcgtgaacattct
ccgattgccaagcctccattgagcttcatcctcatgaccatcatccccatggacaccatc
tccaaggaccctgttcctatgcacaccaccaccatggccgtgattgctttgacgatggac
cctgtaacccaccaccctatagccaaggtccccaaggtcaccattgccattgccacggcc
caccacctgggcactcagaaggacgaggtcaaggtaaaggacactgtcccttccattgca
aactgcatctgtgtacggactccctcccctaaggactctctagtctcaggtatggagcag
gacccatctgtcatgcagatcttaggacctgctatcagacagagtaggttagaggattta
ttttatggccagctcctacacagaaaggcctggatgaaagtctcttcagcattggccaat
accaaggatagtcccgtcctcttagattccctcaaggataccgagctctacagaaaacaa
gccaacaaagcccttgtgaagtacaaaggagagaatgatgactttccctctttcggagtg
gaccaaactttttatgtcatcatggctaaaaaggctatgaatctttgcaaatactctgta
gactttcacaggctgctactaagtttaacccaggaatcacagtccgaggaaattgactgc
aatgacaaggatttatttaaagctgtggatgctgctctgaagaaatataacagtcaaaac
caaagtaacaaccagtttgtattgtaccgcataactgaagccactaagacggttggctct
gacacgttttattccttcaagtacgaaatcaaggagggggattgtcctgttcaaagtggc
aaaacctggcaggactgtgagtacaaggatgctgcaaaagcagccactggagaatgcacg
gcaaccgtggggaagaggagcagtacgaaattctccgtggctacccagacctgccagatt
actccaggtggctggtttatcctctggcactgccctggtgggaaattaaccatttctgac
tatcccaactcttcccgtgtgctgcattgtacccagtgtgtgcaagggctcaacagaagg
accagaagacataagacctgccctccattgcaggcagcatcccagattgaggagcgcata
ggctttgagggcagacctggcctggaatctttcagagctccttgccttcttgcctctcct
tttccttgtctagaaaagggagccgagggccctgtggtgacagcccagtacgactgcctc
ggctgtgtgcatcctatatcaacgcagagcccagacctggagcccattctgagacacggc
attcagtactttaacaacaacactcaacattcctccctcttcatgcttaatgaagtaaaa
cgggcccaaagacaggataccggtgaatgtacagataatgcatacatcgatattcagcta
cgaattgcttccttctcacagaactgtgacatttatccagggaaggattttgtacaacca
cctaccaagatttgcgtgggctgccccagagatatacccaccaacagcccagagctggag
gagacactgactcacaccatcacaaagcttaatgcagagaataacgcaactttctatttc
aagattgacaatgtgaaaaaagcaagagtacaggtggtggctggcaagaaatattttatt
gacttcgtggccagggaaaccacatgttccaaggaaagtaatgaagagttgaccgaaagc
tgtgagaccaaaaaacttggcatctcactgatgaaaaggcctccaggtttttcacctttc
cgatcatcacgaataggggaaataaaagaagaaacaactgtaagtccaccccacacttcc
atggcacctgcacaagatgaagagcgggattcaggaaaagaacaagggcatactcgtaga
catgactggggccatgaaaaacaaagaaaacataatcttggccatggccataaacatgaa
cgtgaccaagggcatgggcaccaaagaggacatggccttggccatggacacgaacaacag
catggtcttggtcatggacataagttcaaacttgatgatgatcttgaacaccaagggggc
catgtccttgaccatggacataagcataagcatggtcatggccacggaaaacataaaaat
aaaggcaaaaagaatggaaagcacaatggttggaaaacagagcatttggcaagctcttct
gaagacagtactacaccttctgcacagacacaagagaagacagaagggccaacacccatc
ccttccctagccaagccaggtgtaacagttaccttttctgactttcaggactctgatctc
attgcaactatgatgcctcctatatcaccagctcccatacagagtgatgacgattggatc
cctgatatccagatagacccaaatggcctttcatttaacccaatatcagattttccagac
acgacctccccaaaatgtcctggacgcccctggaagtcagttagtgaaattaatccaacc
acacaaatgaaagaatcttattatttcgatctcactgatggcctttcttaa

>gi568815595f:186684429_186889266|GENSCAN_predicted_peptide_2|280_aa
MVGEESDVLLPRCSDLGTAASQRINAQIVFPLSEIHNHEPGCLLLVLTRRHASKNRNEIV
VKLLEGGVDPHAEDHCEATAMHRAAAKGNLKMIPILLYYRTSTNIQDTEGKTQRPSRRKG
VPIQTPREDSWISHKKDFRGLSKAEVFLCARRSHSCQLGWRRVPPALVGGGQSWPGGRVP
WGVAQTVCPERPRRERRLRGEREEEAADKVMARRWRKSRRRKRKEMEERMSPEETEGTNF
DFAGEAVGQAERKGPAFSAAEESFHEEEKRRRKEQSDLTF

>gi568815595f:186684429_186889266|GENSCAN_predicted_CDS_2|843_bp
atggtaggtgaggagtctgatgtcttattgcctagatgcagtgatctgggaactgctgcc
tcccagaggataaatgcgcagatagtctttccattatccgaaattcacaaccatgaacct
ggctgtttgttgttggtgctgactcgcaggcatgcttccaaaaacaggaatgagattgtt
gtcaagttactagaaggcggggttgatccacatgctgaggaccattgtgaggctacagca
atgcaccgggcagcagccaagggtaacttgaagatgattcctatccttctatactacaga
acatccacgaacatccaagacactgaggggaagactcaaagaccttctaggaggaagggg
gtcccgatccagaccccaagagaggattcttggatctcgcacaagaaagatttcaggggt
ctttcaaaagccgaggttttcctgtgcgctcggaggagccatagctgccagctgggctgg
cggcgggtgcccccagcccttgtgggcggcgggcagagctggcctgggggccgggtcccg
tggggggtcgcgcagacagtgtgtccggagcgcccccggcgggagcgcaggctgcggggc
gagagggaagaggaggcggcggataaggtgatggcgagaagatggaggaagagcagacga
aggaagagaaaggagatggaagagagaatgtcaccagaggagaccgaaggaacaaatttt
gactttgcaggagaagctgtgggccaggcagaaagaaaaggaccagctttttctgcagct
gaagaaagtttccatgaggaagaaaaacggaggcgaaaggagcagagcgacctgaccttc
tga

>gi568815595f:186684429_186889266|GENSCAN_predicted_peptide_3|297_aa
MDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQA
QSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQVVLLSATMPTDVLEVTKKFMR
DPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLT
EKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL
PTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI

>gi568815595f:186684429_186889266|GENSCAN_predicted_CDS_3|894_bp
atggaccccgatggtgtcatcgagagcaactggaatgagattgttgataactttgatgat
atgaatttaaaggagtctctccttcgtggcatctatgcttacggttttgagaagccttcc
gctattcagcagagagctattattccctgtattaaagggtatgatgtgattgctcaagct
cagtcaggtactggcaagacagccacatttgctatttccatcctgcaacagttggagatt
gagttcaaggagacccaagcactagtattggcccccaccagagaactggctcaacaggtt
gtgttgctttctgccacaatgccaactgatgtgttggaagtgaccaaaaaattcatgaga
gatccaattcgaattctggtgaaaaaggaagaattgacccttgaaggaatcaaacagttt
tatattaatgttgagagagaggaatggaagttggatacactttgtgacttgtacgagaca
ctgaccattacacaggctgttatttttctcaatacgaggcgcaaggtggactggctgact
gagaagatgcatgccagagacttcacagtttctgctctgcatggtgacatggaccagaag
gagagagatgttatcatgagggaattccggtcagggtcaagtcgtgttctgatcactact
gacttgttggctcgcgggattgatgtgcaacaagtgtctttggttataaattatgatcta
cctaccaatcgtgaaaactatattcacagaattggcagagggggtcgatttgggaggaaa
ggtgtggctataaactttgttactgaagaagacaagaggattcttcgtgacattgagact
ttctacaatactacagtggaggagatgcccatgaatgtggctgaccttatttaa

>gi568815595f:186684429_186889266|GENSCAN_predicted_peptide_4|370_aa
MAPGCSASGEGLMLPYDMEEKQKDTIRSKSHVSSRGQGKASSDVSALKAHAFCSATKQDK
EDRDLHLRRPAPTKIAGSGPSVDRQGSRGPRAAAPPSLLSLPDRPELFRLRVLELNASDE
RGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKT
TRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKV
SEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSGSFDKLEAVV
KDLIDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCA
TVMQQLSQNC

>gi568815595f:186684429_186889266|GENSCAN_predicted_CDS_4|1113_bp
atggcgccaggctgttcagcttctggtgagggcctcatgctgccttatgacatggaggag
aagcagaaagacactattagaagtaaaagccacgtgtcctcaagagggcaaggcaaagca
tcttcagatgtctctgcccttaaagcacacgcgttctgctctgcgacgaagcaggacaag
gaggacagggacctgcacctccggaggcccgcacctacgaagatagcgggctcgggacct
tcggtggaccggcagggttccagaggcccgcgcgccgccgccccgccctcattgctgagc
ctgccagataggcctgaacttttccgattaagagttcttgagttaaatgcatctgatgaa
cgtggaatacaagtagttcgagagaaagtgaaaaattttgctcaattaactgtgtcagga
agtcgctcagatgggaagccgtgtccgccttttaagattgtgattctggatgaagcagat
tctatgacctcagctgctcaggcagctttaagacgtaccatggagaaggagtcgaaaacc
acccgattctgtcttatctgtaactatgtcagtcgaataattgaacccctgacctctaga
tgttcaaaattccgcttcaagcctctgtcagataaaattcaacagcagcgattactagac
attgccaagaaggaaaatgtcaaaattagtgatgagggaatagcttatcttgttaaagtg
tcagaaggagacttaagaaaagccattacatttcttcaaagcgctactcgattaacaggt
ggaaaggagatcacagagaaagtgattacagacattgccggggtaataccagctgagaaa
attgatggagtatttgctgcctgtcagagtggctcttttgacaaactagaagctgtggtc
aaggatttaatagatgagggtcatgcagcaactcagctcgtcaatcaactccatgatgtg
gttgtagaaaataacttatctgataaacagaagtctattatcacagaaaaacttgccgaa
gttgacaaatgcctagcagatggtgctgatgaacatttgcaactcatcagcctttgtgca
actgtgatgcagcagttatctcagaattgttaa

>gi568815595f:186684429_186889266|GENSCAN_predicted_peptide_5|267_aa
MVSDANSEGSKNSAGIYSGCPGIIRSTEAMDTQGMVKVVAPSVLPFLPHRAFSKIDGHSS
VLTAPGIRGPQGWMTSLKRNLSGFPAAAPKSRLEDEGCSSREFSSMDTFEGYEGAEDMEK
LDDSHETCSSKSAFLERRESTQGEKEERDEEATATGSTKKERAGASTPADSCGGDGWFPG
EGAAPEDLHPGELPSLRSPRLPGSRAPAFPREAMWGPGPCPATQKAAGAAAAAERGRPGP
PPGSPRGALRARLAPAARRRTSRDGDP

>gi568815595f:186684429_186889266|GENSCAN_predicted_CDS_5|804_bp
atggtgagtgatgcaaacagcgagggctctaagaattcagcagggatctacagtggatgc
cccggcatcatccggagcacagaggccatggacactcaggggatggtcaaggtcgtagct
ccctccgttcttccgttcctccctcacagagctttcagcaagatagatggtcattcttct
gtcctcactgctcccggcataaggggaccccagggctggatgacttccctaaagaggaat
ctctcagggtttcctgcagccgctcccaagtcccgtctggaggatgaaggctgctccagc
agggagtttagctccatggacacctttgaaggctatgaaggtgcagaagacatggaaaag
ttggatgacagtcacgaaacctgttcctccaaatccgctttcctggagaggagagaaagc
acccagggagaaaaagaagaacgcgatgaggaagcaacggcgaccggcagcaccaagaag
gagcgtgctggggcgtccacgccggctgactcctgcgggggcgacggctggtttccaggc
gagggcgcggcgcccgaggacctccaccccggagagctgccctccctgcggtcgccccgg
ctccccggctccagagcgcccgcattcccgagagaggcgatgtgggggcccgggccctgc
ccagctacgcagaaagcagccggggccgcggcggcggcagaaaggggacgcccagggccg
cctcccgggagcccgaggggtgccctgcgtgctcgtctagctcccgccgcccggcgaagg
acctcgcgggacggggacccctag

>gi568815595f:186684429_186889266|GENSCAN_predicted_peptide_6|251_aa
MWIPGLRMLLLGAVLLLLALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAP
GRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRS
AFSVGLETYVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDVKV
SLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADNDNDST
FTGFLLYHDTN

>gi568815595f:186684429_186889266|GENSCAN_predicted_CDS_6|756_bp
atgtggattccagggctcaggatgctgttgctgggagctgttctactgctattagctctg
cccggtcatgaccaggaaaccacgactcaagggcccggagtcctgcttcccctgcccaag
ggggcctgcacaggttggatggcgggcatcccagggcatccgggccataatggggcccca
ggccgtgatggcagagatggcacccctggtgagaagggtgagaaaggagatccaggtctt
attggtcctaagggagacatcggtgaaaccggagtacccggggctgaaggtccccgaggc
tttccgggaatccaaggcaggaaaggagaacctggagaaggtgcctatgtataccgctca
gcattcagtgtgggattggagacttacgttactatccccaacatgcccattcgctttacc
aagatcttctacaatcagcaaaaccactatgatggctccactggtaaattccactgcaac
attcctgggctgtactactttgcctaccacatcacagtctatatgaaggatgtgaaggtc
agcctcttcaagaaggacaaggctatgctcttcacctatgatcagtaccaggaaaataat
gtggaccaggcctccggctctgtgctcctgcatctggaggtgggcgaccaagtctggctc
caggtgtatggggaaggagagcgtaatggactctatgctgataatgacaatgactccacc
ttcacaggctttcttctctaccatgacaccaactga