GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:31:50

Sequence gi568815594f:73640659_73842033 : 201375 bp : 37.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -   5827   5632  196  1  1  101  100    72 0.355   7.77
 1.10 Intr -   9417   9317  101  1  2   75   65    45 0.372  -0.19
 1.09 Intr -  12317  12132  186  0  0   33   36   172 0.020   5.24
 1.08 Intr -  17869  17729  141  2  0   85   84   142 0.675  12.90
 1.07 Intr -  18452  18295  158  1  2   19   41    82 0.036  -4.67
 1.06 Intr -  25881  25767  115  1  1   78   50   117 0.205   5.49
 1.05 Intr -  27835  27397  439  1  1   22   91   247 0.291  10.56
 1.04 Intr -  28192  27983  210  1  0   41   55   127 0.392   2.89
 1.03 Intr -  29514  29241  274  2  1   54   25   169 0.178   3.82
 1.02 Intr -  29755  29593  163  2  1   81   28   119 0.193   3.31
 1.01 Init -  41327  41279   49  2  1   68  111    38 0.059   5.26
 1.00 Prom -  46811  46772   40                              -4.25

 2.00 Prom +  47592  47631   40                              -0.95
 2.01 Init +  52188  52237   50  2  2   25   99    64 0.057   1.67
 2.02 Intr +  60863  60983  121  2  1  120   99    -4 0.080   3.48
 2.03 Intr +  66878  66945   68  1  2   64  105    35 0.026  -0.42
 2.04 Intr +  67351  67444   94  1  1   59   76    97 0.093   4.65
 2.05 Intr +  90735  90839  105  2  0  101   -6    99 0.076   1.29
 2.06 Term +  93845  93886   42  1  0   78   47    80 0.108  -0.92
 2.07 PlyA +  93994  93999    6                               1.05

 3.00 Prom +  99874  99913   40                              -3.75
 3.01 Init + 100001 100064   64  1  1   90  121   120 0.999  15.08
 3.02 Intr + 100884 101019  136  1  1  116   92    73 0.999   9.21
 3.03 Intr + 101291 101374   84  2  0   93  107    74 0.974   7.82
 3.04 Term + 104106 104184   79  0  1  106   54    45 0.858  -0.84
 3.05 PlyA + 104398 104403    6                               1.05

 4.00 Prom + 108720 108759   40                              -2.95
 4.01 Init + 121405 121468   64  0  1   78   55    68 0.169   3.86
 4.02 Term + 123296 123435  140  0  2   96   54    51 0.201  -0.36
 4.03 PlyA + 123705 123710    6                               1.05

 5.03 PlyA - 124058 124053    6                               1.05
 5.02 Term - 125316 124868  449  1  2   58   48   246 0.122  11.99
 5.01 Init - 130605 130368  238  0  1   62   99   103 0.212   7.02
 5.00 Prom - 138376 138337   40                              -5.65

 6.00 Prom + 140965 141004   40                              -5.45
 6.01 Init + 141021 141104   84  2  0   82  116   -16 0.440   1.47
 6.02 Term + 147553 147984  432  0  0 -328   54   962 0.573  45.51
 6.03 PlyA + 148704 148709    6                               1.05

 7.00 Prom + 155664 155703   40                              -2.35
 7.01 Init + 159287 159477  191  1  2   64   88    60 0.288   2.06
 7.02 Term + 162194 162311  118  2  1   92   48   119 0.379   5.33
 7.03 PlyA + 162862 162867    6                               1.05

 8.00 Prom + 163586 163625   40                              -2.55
 8.01 Init + 167774 167836   63  1  0   62  116    56 0.859   7.00
 8.02 Term + 184982 185044   63  1  0   87   36    69 0.021  -1.49
 8.03 PlyA + 185846 185851    6                               1.05

 9.02 PlyA - 185980 185975    6                               1.05
 9.01 Sngl - 186405 186019  387  0  0   37   45   228 0.556   9.36
 9.00 Prom - 194016 193977   40                              -3.65

10.00 Prom + 194315 194354   40                              -7.05
10.01 Init + 196093 196201  109  0  1   70   81   160 0.988  11.93
10.02 Intr + 196306 196438  133  2  1   94   78   134 0.830  11.78
10.03 Intr + 196545 196628   84  0  0   97   68    58 0.591   2.72
10.04 Term + 198359 198392   34  2  1   88   51    49 0.419  -2.72
10.05 PlyA + 199694 199699    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  16775  16561  215  0  2   34   37   149 0.845   0.81
S.002 Sngl +  59802  59987  186  2  0   46   40   205 0.861   6.33
S.003 Term - 133597 133387  211  0  1   27   36   193 0.869   3.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_1|678_aa
MFKPESLKSGTAQRSFDSARVTDSPGVTGYLEAWFLFYKPGSLEASGSLEAWSTVAGGSL
DFRPMKDLLSKAIAQAREYGDPKAWQFPVILQPPCRPAAQNQLQPADVAQQAADLAANSR
SVLISCFSAVQKAVAAAGLVIAPEKIQTSSPYHYLGMQLEDKDRPWWNEPIKHSKINFEN
RTLKQRDAATPHAQLNLAPFTLNFLNLARNQPFTVAEQHFTGSKFDPQKGMRMKRSQKQK
AKTPQKPRRKFRLLTHKLHDLDIETKSRCVTYNTTRSTPPTWGQIKVLSHHTENLLKEKG
IPKTTSNIILAVFMVVSAAVSIPPVGATQNYTHWAYVPFPPLIWSVSWMDSSVEVYTNNS
AFMPVPNDDRFPAQPEEEVCRCLQGVRKQVQSQRQAMMVMAILVNKKGADVGGKPIRIAT
LVYLPSKLGKRAPRGTKVDLLSSVHGYGVPPNITLNQRHTQETKELAHGRTSRQEKESPS
WLGNADHGFDPDHQEDVEGDRPTDTYDRGRKEYAGTALTLSHGRVPECEGEQASAQAQSS
AVKVQKWFVSSHRKEKQQTVVNTLFQSLVPEPATSGCSGLYIVQDRKKTLHFAHKLQVCW
ALQGCGTETQLSQQPLLCTWERDGVAIVSLSIELSAALSQWKAERGCTQLMPARGANIPG
RPSPEGNCHPSSQSLNSX

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_1|2034_bp
atgtttaagcctgaaagtctgaaatctgggacagcacagagatcttttgactcggctaga
gtcacggactcccctggagtcacaggataccttgaggcctggttccttttctacaaaccg
ggttcccttgaagcctcaggctcccttgaagcctggtccacagttgccggtggcagcctg
gatttcaggcccatgaaagacctgctcagcaaggctatagcacaggcaagagaatatggg
gatcccaaagcctggcaatttcctgtaattttacagcctccctgccgtcctgcggcacaa
aatcagctacagcccgctgatgttgctcagcaagcagctgatctcgcggcaaattctcgc
tctgtgttaatatcttgtttttctgcagtacaaaaagcagttgcagcagccggtttagtt
attgccccagaaaaaatccaaacttcttctccttatcactatttaggaatgcagctagaa
gacaaggacaggccttggtggaacgagccaataaaacactcaaagatcaacttcgaaaac
aggacactaaaacagagggatgctgccactcctcatgctcagttaaatctggctcctttt
acactaaatttcttaaacctagcaagaaatcaaccttttacagtggcagaacaacatttc
actggaagtaaatttgatccacaaaaaggaatgcggatgaaacgttcccagaaacaaaag
gcaaagacccctcaaaaaccgaggaggaaatttcgcctcctgacacataaacttcatgac
ctcgacattgagacaaaatctcgctgtgtgacctacaacaccactcgttcaactccacca
acatggggtcaaataaaggtcttatcccatcacacagaaaatttattaaaagaaaaagga
atcccaaaaacgaccagtaatataattctggctgtctttatggtagtcagtgcagcagta
agtataccaccagttggggcaactcaaaattatacccactgggcatatgttccttttccc
cctttaatttggtctgtctcctggatggactcctcagtagaagtttacactaataatagt
gcattcatgccggtccctaatgatgataggtttccagctcaaccggaagaagaagtctgc
agatgcctccaaggagtccggaaacaagtccaaagtcaacgacaagcaatgatggtgatg
gcgatcctagttaataaaaagggggcagatgtgggtggcaagccaatcaggattgctaca
cttgtctatttaccatcaaaattgggcaagagagcaccaagaggcactaaagtagatctt
ctgagttcagtgcatgggtatggggtgccacctaacatcacgcttaatcagagacacaca
caggagacaaaggaattggctcatggccgcaccagcaggcaagaaaaggagtcaccatca
tggcttggtaatgctgatcacggatttgaccccgaccatcaggaggacgtagaaggagat
aggcctactgatacatatgataggggcaggaaggaatatgctggcactgccctcactctc
agccatggcagggtccctgaatgtgaaggcgagcaggccagcgcacaggcacagagttca
gcagtgaaggtgcagaagtggtttgtgtcaagccatagaaaagagaagcagcaaacagtg
gtcaacaccctattccaaagtctggttccagaaccagcaacatcaggatgctctggcctc
tacatagttcaagaccgaaagaaaacactccattttgcccacaaactacaggtctgctgg
gcattgcagggttgtgggactgagacacagttgtctcaacaaccacttctatgcacttgg
gagagggatggggtagcgattgtgagcctttccattgaactcagtgctgccctgtcacag
tggaaagcagaacggggctgtactcagcttatgcctgcacgtggagcaaacattccgggc
aggccctcgccagaggggaattgccatcccagcagtcagagcttgaattccann

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_2|159_aa
MSTVLSYSMGTGNIPTRYSSHAHGPINHMFTNHHLRDLPREVYLRPLTYTIPHNQLQHRS
PVPGPGPVCDLLGTRMHSRRLSSMKLVPGAKTVGNRCFIALKISKVPAAKDLSECQIMSL
IFQRHCNGSPHRVKAGILAMTRKAYLEPRRYRMVNSPVE

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_2|480_bp
atgtctacagtattgagttattctatgggaaccggaaacattcctaccaggtacagttcc
catgctcatggtccaataaaccacatgtttacaaatcaccatctcagagatcttcccagg
gaggtctacctaagacccctaacttacaccataccccacaatcagctccagcacaggtcc
ccagtccccgggcctggaccagtgtgtgacctattaggaaccaggatgcacagcaggaga
ttgtcttccatgaaactggtccctggtgccaaaacggttgggaaccgctgctttatagca
ctcaagataagcaaagtgcctgcagccaaggatctgtcagagtgtcagatcatgtcactg
attttccaaagacactgcaatggttctccccacagagtgaaagctggaatccttgcgatg
acccgcaaggcctatctagagcctagaagatatcggatggttaattcaccagtggaatga

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_3|120_aa
MTSKLAVALLAAFLISAALCEGAVLPRSAKELRCQCIKTYSKPFHPKFIKELRVIESGPH
CANTEIIVKLSDGRELCLDPKENWVQRVVEKFLKSPQQSPECDVPLPVSMCSPCSIPTYE

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_3|363_bp
atgacttccaagctggccgtggctctcttggcagccttcctgatttctgcagctctgtgt
gaaggtgcagttttgccaaggagtgctaaagaacttagatgtcagtgcataaagacatac
tccaaacctttccaccccaaatttatcaaagaactgagagtgattgagagtggaccacac
tgcgccaacacagaaattattgtaaagctttctgatggaagagagctctgtctggacccc
aaggaaaactgggtgcagagggttgtggagaagtttttgaagagcccacaacagtcccca
gagtgtgatgttccccttcctgtgtccatgtgttctccttgttcaattcccacctatgag
tga

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_4|67_aa
MVTLETQDVIRKEHGVGFKGTVSLSKWSSLMPALKWTAVSSTPAIQFSPHSLTHTLLQGV
KSCWLSK

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_4|204_bp
atggtaaccctagagacacaggatgtgattagaaaggaacatggagtaggatttaagggt
actgtaagtctgagtaagtggagttcactcatgccagcactgaagtggacagctgtttcc
agcactcctgcaatccagttctcgcctcattcactcacgcacacccttctgcaaggagtt
aagagctgctggctgagtaaatga

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_5|228_aa
MSFGSEEEYFPDPFTGLTTEVPHLLSQQLSTLVGGSTLSNEAGTGLHEPWNQLAALVPAG
ANSTHLHLLCSTPFRRECTEVLVLEGGMLPPGDTTMISLNWKLRLSPGHLAFLLPLSQQA
KKGVTLLAGVTDSDHQDEISLLLHNGGKEECTWNTGDPLGCLLVLPCPMIKVNGKLQRPN
PDRTTNGPEPSGIKVSVTLPGKKPQPAEVLAEGKGNTEWVVEVVINTS

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_5|687_bp
atgtcttttggtagtgaagaagaatatttccctgaccctttcacaggactcacaacagag
gtgcctcatttactcagtcagcagctttcaactcttgtgggagggagcacgctatcaaat
gaggcaggaactggattgcatgagccctggaaccagctggctgctttggtgccagcagga
gcaaactccactcacttgcacctgctgtgttccacccctttcaggagggagtgcacagag
gtcttagttctagagggaggaatgctgccaccaggagacacaactatgatttcattaaac
tggaagttaagattgtcacctggccaccttgcgttcctcctacctctaagtcaacaggct
aagaaaggagttacattgttggctggggtgactgactcagaccatcaagatgaaatcagc
ctactactccacaatggaggtaaggaagagtgcacatggaatacaggagatcccttaggg
tgtctcttagtattaccatgccctatgataaaggtcaatgggaaactacaacggcccaat
ccagacaggactacaaatggcccagaaccttcaggaataaaggtttcggtcactctacca
ggtaaaaaaccacaacctgctgaagtgcttgctgaaggcaaagggaatacagaatgggta
gtagaagtagtcatcaataccagctaa

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_6|171_aa
MGETAPMIQLPPPGPALDMWRLWGLQFKEKEEEEEKEEEEDEEKEEDEKEEDEEDEKKED
EKEEEEKEDEEKEEEEKEEDEKEEDEEEEEKEKEEKKEEEKEEEEKEKEEEEEKEEEEEK
EEEEKKKRQQSQSPFHTRISLFHSGSFTSNITKDFIEAKRKVELVTRVCML

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_6|516_bp
atgggggaaacagctcccatgattcaattacccccacctggtcctgcacttgacatgtgg
agattatggggattacaattcaaggagaaggaggaggaggaggaaaaggaggaggaggag
gatgaggagaaggaggaggatgagaaagaggaggatgaggaggatgagaagaaggaggat
gagaaggaggaggaagaaaaggaggatgaggagaaggaggaggaggagaaggaggaggat
gagaaggaggaggatgaggaggaggaggagaaggagaaggaggagaaaaaggaggaggag
aaggaggaggaggagaaggagaaggaggaggaagaggagaaggaggaggaagaggagaag
gaggaggaggagaagaagaagagacaacagagtcagagtccctttcacactaggatttct
ctctttcattctggaagttttacttctaatattacaaaggacttcattgaagccaagcgg
aaagttgaacttgtgacaagagtgtgtatgctgtga

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_7|102_aa
MPACELHQLAYLEYLVGVIGEELFLLEPMYKGWKLYLLLQMCNHKHKPIMITDNQGNMTP
IGMSSFMSVEVELAEATDNPFSTAATAVPTLAATTLGKKQRV

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_7|309_bp
atgcctgcctgtgaactccaccaactggcctatctagaatatctggtgggagtgattggt
gaagagctgtttcttttggagccaatgtataaaggctggaagctgtatctacttcttcaa
atgtgcaaccacaaacacaagcccataatgatcacagataatcagggaaacatgacacca
ataggaatgagtagctttatgtctgttgaggtggagcttgcagaagcaactgacaacccc
ttttccactgctgctacagcagtacccacccttgctgccacaacactggggaaaaaacaa
agagtctga

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_8|41_aa
MDTKKGAIDIRAFFKVEGGKKSLAKDSWRNRELAVLLTVTS

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_8|126_bp
atggacacaaagaagggagcaatagacatcagagccttctttaaggtggagggtgggaag
aagagtctagctaaagacagttggaggaacagggagttggcagtcctactcacggtaact
tcatag

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_9|128_aa
MKNYFLWMNKEWFLEMESTPGENAVMIVEMITKDTEYYIINFVDKATSGIERIDSNFGRG
SAVDKMLPNNIMCYREIFCERKSQSMPQISLLTSFKKLPQPPQPSAANFLISEQPSTLRQ
DSPPGKVL

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_9|387_bp
atgaagaattacttcttatggatgaacaaagagtggtttcttgaaatggaatctactcct
ggtgaaaatgctgtgatgattgttgaaatgataacaaaggatacggagtattacatcata
aattttgttgataaagcaacatcaggaattgaaaggattgactccaattttggaagaggt
tctgctgtggataaaatgctgccaaacaacataatgtgctatagagaaatcttttgtgaa
aggaagagtcaatcaatgccacaaatctcattgctgacttcttttaagaaattgccacag
ccacctcaaccatcagcagccaacttcctgatcagtgagcagccatcaacattgaggcaa
gactctccaccaggaaaagtattatga

>gi568815594f:73640659_73842033|GENSCAN_predicted_peptide_10|119_aa
MSLPSSRAARVPGPSGSLCALLALLLLLTPPGPLASAGPVSAVLTELRCTCLRVTLRVNP
KTIGKLQVFPAGPQCSKVEVVASLKNGKQVCLDPEAPFLKKVIQKILDRHEIKVAKHDE

>gi568815594f:73640659_73842033|GENSCAN_predicted_CDS_10|360_bp
atgagcctcccgtccagccgcgcggcccgtgtcccgggtccttcgggctccttgtgcgcg
ctgctcgcgctgctgctcctgctgacgccgccggggcccctcgccagcgctggtcctgtc
tctgctgtgctgacagagctgcgttgcacttgtttacgcgttacgctgagagtaaacccc
aaaacgattggtaaactgcaggtgttccccgcaggcccgcagtgctccaaggtggaagtg
gtagcctccctgaagaacgggaagcaagtttgtctggacccggaagccccttttctaaag
aaagtcatccagaaaattttggacagacatgaaataaaagttgctaaacatgatgaatga