GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:36:21

Sequence gi568815580f:9413046_9635934 : 222889 bp : 41.23% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6386   6537  152  0  2   33   97    99 0.019   4.26
 1.02 Intr +  21367  21579  213  0  0   50   42   112 0.517   0.79
 1.03 Intr +  22039  22245  207  0  0   18   47   231 0.905  10.35
 1.04 Intr +  25037  25133   97  1  1   90  105    63 0.780   6.86
 1.05 Intr +  34318  34466  149  2  2   84   86    69 0.613   5.33
 1.06 Intr +  35583  35675   93  2  0   74   92    60 0.137   4.24
 1.07 Intr +  45354  45467  114  2  0   44   89    64 0.076   1.82
 1.08 Intr +  65509  65802  294  0  0   83   33   147 0.033   4.98
 1.09 Term +  87840  87989  150  2  0   58   49   123 0.596   2.33
 1.10 PlyA +  88164  88169    6                               1.05

 2.00 Prom +  97319  97358   40                              -4.65
 2.01 Init + 100001 100244  244  1  1   77   83   298 0.978  26.14
 2.02 Intr + 103800 104258  459  1  0   95   84   480 0.799  40.53
 2.03 Intr + 109115 109464  350  0  2   44   88   276 0.997  17.35
 2.04 Intr + 111549 111710  162  2  0   79   89   108 0.993   9.25
 2.05 Intr + 112675 112806  132  0  0   65  109    36 0.907   3.32
 2.06 Intr + 117789 117896  108  2  0   87   91   118 0.999  11.56
 2.07 Intr + 120290 120411  122  1  2   61   88   223 0.998  17.97
 2.08 Intr + 120658 120781  124  1  1   69   81   238 0.999  20.87
 2.09 Intr + 122626 122882  257  0  2   78  -25   369 0.327  19.92
 2.10 Intr + 123466 123664  199  1  1  127   17    88 0.226   4.03
 2.11 Intr + 124709 124854  146  1  2   97   60   128 0.245   9.06
 2.12 Intr + 127163 127238   76  2  1   51   93    66 0.107   2.00
 2.13 Intr + 128581 128753  173  0  2  116   26    71 0.006   1.52
 2.14 Term + 133355 133751  397  2  1   17   33   216 0.057   2.56
 2.15 PlyA + 133879 133884    6                               1.05

 3.20 PlyA - 133891 133886    6                               1.05
 3.19 Term - 134907 134744  164  1  2   72   43   260 0.999  17.02
 3.18 Intr - 136293 136152  142  0  1   49  100    51 0.964   1.41
 3.17 Intr - 137141 137007  135  2  0   83  115   210 0.962  23.04
 3.16 Intr - 137353 137233  121  0  1   80   76    63 0.766   3.88
 3.15 Intr - 140377 140277  101  1  2   72   80    75 0.571   3.09
 3.14 Intr - 144337 144176  162  1  0   63   88   109 0.942   7.65
 3.13 Intr - 146559 146374  186  0  0  104  109    85 0.950  11.16
 3.12 Intr - 149030 148935   96  2  0   83  108    53 0.980   6.09
 3.11 Intr - 150505 150333  173  2  2   85   77   161 0.999  13.44
 3.10 Intr - 157638 157112  527  2  2  -34   86   442 0.058  23.46
 3.09 Intr - 164146 164019  128  1  2  116   43    79 0.256   4.76
 3.08 Intr - 170230 170072  159  1  0   65   45    86 0.568   1.26
 3.07 Intr - 171535 171470   66  1  0   69  111    83 0.988   6.88
 3.06 Intr - 175190 175044  147  2  0  108   87   236 0.999  25.01
 3.05 Intr - 175808 175666  143  0  2   63  110    80 0.770   6.85
 3.04 Intr - 180829 180723  107  0  2   54   76   148 0.873   9.14
 3.03 Intr - 196403 196212  192  1  0   56   96    93 0.161   4.59
 3.02 Intr - 201225 201181   45  2  0   99   76    94 0.651   5.91
 3.01 Init - 201955 201900   56  1  2   65   52   167 0.947   9.61

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  17572  17499   74  1  2   68   78    55 0.861   1.09
S.002 Init - 157538 157112  427  2  1   73   86   354 0.821  30.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815580f:9413046_9635934|GENSCAN_predicted_peptide_1|489_aa
XKSNLLPALLKECHPAQKPAAESNETFRSTAFPGAHLAPALGFSCPSSRPLLRSRSELAR
TCTLLSLPLFLCVTAFVWGAPGAAAVRRKRAQPQPGLHGGGAAPLSGNREGPAQSSVPQQ
STQNGVGGGYEEALTPTCWPRDPSLDVPARRPASGLVARTSRGCGIPDPPPARDSDLATA
ASTSKQTPAPAGDRAIQWNGSSRGKGKPENSRAGFPSPEEGAPGKYVQVANRVSSDCAVR
PQPMWEWHRDRDCVKDKNILVSFVLCVLVISIDLGFRSVHILFTEVAAPLQGCLPLSALP
CRSETFSQFTTGKIFSNWATNMCQDYLCPLTLQDGILNTCQVGGLFFSEILSCVPSLGMA
RPCSGPGGGGLGVVVPCLSTFPGVRVQKPPLRWIGSFAVAGLVFLWKLSKKSRRCPPERG
FPTELEASLPQAQKGLPPALLINVKKENVLLISNELLVDHTSHMLTVDGEIEPVQLYTLG
EDPRKLERT

>gi568815580f:9413046_9635934|GENSCAN_predicted_CDS_1|1470_bp
ntgaagtccaatttgctgccagccttactgaaagaatgtcatccggcacagaaacccgct
gcagagtcaaatgaaaccttcaggtccactgccttcccaggagcccacctggcccctgcc
ctgggtttttcttgcccgtccagcaggcccttgctcaggagccgttctgagttagcaagg
acgtgtacccttctaagccttcctttgtttctttgtgtaactgcctttgtctggggagcc
ccgggggctgcagcggtcaggaggaagcgggcccagcctcagccaggcctgcacggcgga
ggggcagccccactctccggaaacagggagggcccagcgcagagcagcgttccccagcag
agcacacaaaatggagttgggggaggctatgaagaggccctcacgcccacatgctggcca
cgggacccatctctagacgttcctgcacgtagacccgcatcaggacttgttgcaaggact
tctcgaggctgtggtattccagatccgccaccagcacgggatagtgacctggcaacggcc
gcctccaccagcaaacagacgccagctcctgcaggtgatagagctatccagtggaatggc
tcatccaggggaaaggggaagcctgagaattctagagcaggatttcccagtcctgaagag
ggggctcctggaaaatatgtacaagtagccaatcgggtcagctcagactgtgcggtccga
ccccagcccatgtgggagtggcacagggatagggactgcgttaaggataaaaatatcctg
gtgtcctttgttctgtgtgtacttgtgatctcgattgacctgggcttccgttctgttcac
attctgttcacggaggtggcagcccccctgcagggctgtttgcccctttctgccctccct
tgccgcagtgagacattttcccagttcaccactggtaaaatctttagcaactgggctacg
aacatgtgccaggactatctgtgtccacttacccttcaagatggcatccttaacacctgc
caagtgggtggcctcttcttctccgagatcctctcctgcgtcccgagtttgggaatggcc
cggccgtgctcaggcccaggcggtggaggcctcggtgtagtagtgccgtgcttgtcgacg
ttcccaggagtccgggttcagaagccccctctccggtggattggcagcttcgcggtagct
gggctagtcttcctctggaaactcagtaaaaagagtcggcgctgtccgcctgagcgcggg
tttcctaccgagctagaggccagcctgcctcaggcgcagaagggtttgccgccggccttg
cttataaatgtaaaaaaagagaatgtgctcctcatatctaatgagctgctggtagaccac
acttcacacatgttaactgttgatggagagattgaacctgtccagctttacacactggga
gaggaccctaggaagctggagaggacctag

>gi568815580f:9413046_9635934|GENSCAN_predicted_peptide_2|982_aa
MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDV
VSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKK
KEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQ
IDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKV
DELKAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKV
QEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVF
FTHVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGI
KDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVIN
ILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSS
ESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAK
AEQQAQEDEEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSKPQSIS
PSHQDGLSGHRQGLPVEPAHRPPAVQSSGEEAARSCQFLTAGTSKGLLTGLVKGSHLGLT
RGEPRTPGMHAGGGMPPFHKPMLLQREPVFAKPSGLGWVCCLSSSWLREAMEGTGLSLTS
EFQINDGCFLSVTHLPVGCSLRNFLLSTLNSSRCWRTSLRSPVHGRASPGDWEQQDNVGP
HPNAAQEPLARSTRGLRQAKVFKPGLQEHQTFIHAALYKSTFTQELICLQNNPVRNRAGF
TNSHFTDEDIEAQRCLTVSRELQDNPPLLSSVGGIQAVPDTRHPPALRAAGRSRRSTQEA
PAAAKSKTQTQGHRQIPEKLIN

>gi568815580f:9413046_9635934|GENSCAN_predicted_CDS_2|2949_bp
atgactgagtgcttcctgccccccaccagcagccccagtgaacaccgcagggtggagcat
ggcagcgggcttacccggacccccagctctgaagagatcagccctactaagtttcctgga
ttgtaccgcactggcgagccctcacctccccatgacatcctccatgagcctcctgatgta
gtgtctgatgatgagaaagatcatgggaagaaaaaagggaaatttaagaaaaaggaaaag
aggactgaaggctatgcagcctttcaggaagatagctctggagatgaggcagaaagtcct
tctaaaatgaagaggtccaagggaatccatgttttcaagaagcccagcttttctaaaaag
aaggaaaaggattttaaaataaaagagaaacccaaagaagaaaagcataaagaagaaaag
cacaaagaagaaaaacataaagagaagaagtcaaaagacttgacagcagctgatgttgtt
aaacagtggaaggaaaagaagaaaaagaaaaagccaattcaggagccagaggtgcctcag
attgatgttccaaatctcaaacccatttttggaattcctttggctgatgcagtagagagg
accatgatgtatgatggcattcggctgccagccgttttccgtgaatgtatagattacgta
gagaagtatggcatgaagtgtgaaggcatctacagagtatcaggaattaaatcaaaggtg
gatgagctaaaagcagcctatgaccgggaggagtctacaaacttggaagactatgagcct
aacactgtagccagtttgctgaagcagtatttgcgagaccttccagagaatttgcttacc
aaagagcttatgcccagatttgaagaggcttgtgggaggaccacggagactgagaaagtg
caggaattccagcgtttactcaaagaactgccagaatgtaactatcttctgatttcttgg
ctcattgtgcacatggaccatgtcattgcaaaggaactggaaacaaaaatgaatatacag
aacatttctatagtgctcagcccaactgtgcagatcagcaatcgagtcctgtatgtgttt
ttcacacatgtgcaagaactctttggaaatgtggtactaaagcaagtgatgaaacctctg
cgatggtctaacatggccacgatgcccacgctgccagagacccaggcgggcatcaaggag
gagatcaggagacaggagtttcttttgaattgtttacatcgagatctgcagggtgggata
aaggatttgtctaaagaagaaagattatgggaagtacaaagaattttgacagccctcaaa
agaaaactgagagaagctaaaagacaggagtgtgaaaccaagattgcacaagagatagcc
agtctttcaaaagaggatgtttccaaagaagagatgaatgaaaatgaagaagttataaat
attctccttgctcaggagaatgagatcctgactgaacaggaggagctcctggccatggag
cagtttctgcgccggcagattgcctcagaaaaagaagagattgaacgcctcagagctgag
attgctgaaattcagagtcgccagcagcacggccgaagtgagactgaggagtactcctcc
gagagcgagagcgagagtgaggatgaggaggagctgcagatcattctggaagacttacag
agacagaacgaagagctggaaataaagaacaatcatttgaatcaagcaattcatgaggag
cgcgaggccatcatcgagctgcgcgtgcagctgcggctgctccagatgcagcgagccaag
gccgagcagcaggcgcaggaggacgaggagcctgagtggcgcgggggtgccgtccagccg
cccagagacggcgtccttgagccaaaagcagctaaagagcagccaaaggcaggcaaggag
ccggcaaagccatcgcccagcagggataggaaggagacttctaaaccacagtctataagc
ccgagtcaccaggacggcctgtctggccacagacaggggctgcctgtggagcctgcccac
cggcccccggcagtgcagtccagcggggaggaggctgcccgttcctgccagttcctcact
gcggggaccagcaaaggccttctcactgggttggtcaaaggtagtcaccttggcctgaca
cggggagaaccccggacccctggcatgcatgctggcggcggcatgcctcccttccacaag
cccatgctgctgcagagggagcctgtgtttgcaaaacccagtggactgggctgggtctgc
tgtctgagcagctcctggctccgggaggccatggaaggtacaggactctcccttacatca
gaatttcagatcaacgatggatgttttcttagtgtaactcatctgcctgtgggatgttcc
ctgcggaacttcctcttgtccacgctgaattcctcacggtgctggaggaccagcttgcgc
tctcctgtccacggccgggcatctcctggggattgggaacagcaggacaatgtgggcccg
cacccaaacgcggctcaggagcctctggcgagaagcaccaggggactccgacaggccaag
gttttcaaaccaggcttacaggaacatcaaacatttatacacgcagcactttacaaaagc
accttcacacaggaactcatttgcctgcaaaacaaccctgtgagaaacagggcaggtttt
actaattcccattttactgacgaagacatcgaggctcagagatgcttgactgtgtctcgg
gagcttcaagacaacccccctctgctgtcttcagtgggcggcatccaagctgtgccagac
actcggcacccacctgctcttagggctgcaggcaggagcaggaggagcacccaagaggca
cctgctgctgccaagagcaaaacccaaacccagggacacaggcagattccagagaaacta
ataaactag

>gi568815580f:9413046_9635934|GENSCAN_predicted_peptide_3|949_aa
MGRWLRAARPPRWLRLAGRPLAASGGPAGGRRRIIFRPSYHVSKPVLISLESLLPVGGEE
QNIGAVSGSGQGIIQKPLEGALERESYLGVLLNRDLGGQMVARSLLDTLREVCDDERDCI
AVLERISRLADDSEPTVRAELMEQVPHIALFCQENRPSIPYAFSKFLLPIVVRYLADQNN
QVRKTSQAALLALLEQELIERFDVETKVCPVLIELTAPDSNDDVKTEAVAVCAANFGDIC
SVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATCQEIRRTKLSALFINLIS
DPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEESKSSEEMSVENKNRTRDQEAPEDVQV
RPEDTPSDLSVSNSSVILENTMEDHAAEASGKPLGEISVPLDSSLLCTLSSESHQEAASN
ENDKKPGNYKSMLRPEVGTTSQDSALLDQELYNSFHFWRTPLPEIDLDIELEQNSGGKPS
PEGPEEESEGPVPSSPNITMATRKELEEMIENLEPHIDDPDVKAQVEVLSAALRASSLDA
HEETISIEKRSDLQDELDINELPNCKINQEDSVPLISDAVENMDSTLHYIHSDSDLSNNS
SFSPDEERRTKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYSLPGVALTLGRQNW
HCLRETYETLASDMQWKVRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKDLDEVRIGV
LKHLHDFLKLLHIDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDY
LRPIALNLCADKVSSVRWISYKLVSEMVKKLHAATPPTFGVDLINELVENFGRCPKWSGR
QAFVFVCQTVIEDDCLPMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKDYFLA
SASCHQEAVEQTIMALQMDRDSDVKYFASIHPASTKISEDAMSTASSTY

>gi568815580f:9413046_9635934|GENSCAN_predicted_CDS_3|2850_bp
atggggcgctggctgcgagcggcgcgcccgccgagatggctgcggctggcagggcgacct
ctcgctgcttcaggaggacctgcaggaggacgcagacggataatcttcaggccttcctac
catgtttcaaaaccagttctgataagcttagagtccttgcttccggtgggaggtgaggag
caaaatattggggctgtatctggtagtggccagggaatcattcagaaacctttggaaggt
gcccttgaacgtgaatcatatttaggagtattgttaaatagggatttgggaggacaaatg
gtggcccggagtttgctcgataccttgagggaagtctgcgatgatgaaagagattgtatt
gctgttttggaaagaattagcagattggccgatgattcagaaccaactgtgagagcggag
ctgatggaacaggtgcctcacatcgcactgttttgtcaagaaaaccggccttcaatacca
tatgctttttcaaaattcttactacctattgtggttagataccttgcagatcagaataat
caggtgaggaaaacaagtcaggcagctttgctggctctgttggagcaggagctcattgaa
cgatttgatgtggagaccaaagtgtgccctgtcctcatagagctgacagccccagatagc
aatgatgatgtgaaaacagaagctgtggctgtctgtgctgccaattttggagatatttgc
agtgtagttggccagcaagctactgaagaaatgttgctgcccagatttttccagctttgt
tctgataatgtatggggagtccgaaaggcttgtgctgaatgcttcatggcggtttcatgt
gcaacatgtcaagaaatccgacggaccaaattatcagcactttttattaatttgatcagt
gatccttcacgttgggttcgccaagcagcttttcagtctctgggacctttcatatctact
tttgctaatccatctagctcaggccagtattttaaagaagaaagcaaaagttcagaagag
atgtcagtagaaaacaaaaataggaccagagatcaagaagccccagaggatgtacaagtc
aggccagaggatactccttcagatctcagtgttagtaattccagtgtcatactggaaaac
acgatggaagaccatgctgctgaggcatccgggaagcctctaggtgaaattagtgttcca
ctggacagctctttactttgtactttgtcctcagaatctcaccaggaagcagctagtaat
gagaatgataaaaaacctggtaactacaaatctatgttacgaccagaggttggcaccact
tcacaagattcagctctcttagatcaggaattgtataactccttccatttctggaggact
cctcttcctgaaatagatctagacatagagcttgaacagaactctgggggaaaacccagc
ccagagggaccagaggaagaatctgagggccctgtgcccagttctccaaacatcaccatg
gccaccagaaaggaactggaagaaatgatagaaaatctagagccccacattgatgatcca
gatgttaaagcacaagtggaagtgctgtccgctgcactacgtgcttccagcctggatgca
catgaagagaccatcagtatagaaaagagaagtgatttgcaagatgaactggatataaat
gagctaccaaattgtaaaataaatcaagaagattctgtgcctttaatcagcgatgctgtt
gagaatatggactccactcttcactatattcacagcgattcagacttgagcaacaatagc
agttttagccctgatgaggaaaggagaactaaagtacaagatgttgtacctcaggcgttg
ttagatcagtatttatctatgactgacccttctcgtgcacagacggttgacactgaaatt
gctaagcactgtgcatatagcctccctggtgtggccttgacactcggaagacagaattgg
cactgcctgagagagacgtatgagactctggcctcagacatgcagtggaaagttcgacga
actctagcattctccatccacgagcttgcagttattcttggagatcaattgacagctgca
gatctggttccaatttttaatggatttttaaaagacctcgatgaagtcaggataggtgtt
cttaaacacttgcatgattttctgaagcttcttcatattgacaaaagaagagaatatctt
tatcaacttcaggagtttttggtgacagataatagtagaaattggcggtttcgagctgaa
ctggctgaacagctgattttacttctagagttatatagtcccagagatgtttatgactat
ttacgtcccattgctctgaatctgtgtgcagacaaagtttcttctgttcgttggatttcc
tacaagttggtcagcgagatggtgaagaagctgcacgcggcaacaccaccaacgttcgga
gtggacctcatcaatgagcttgtggagaactttggcagatgtcccaagtggtctggtcgg
caagcctttgtctttgtctgccagactgtcattgaggatgactgccttcccatggaccag
tttgctgtgcatctcatgccgcatctgctaaccttagcaaatgacagggttcctaacgtg
cgagtgctgcttgcaaagacattaagacaaactctactagaaaaagactatttcttggcc
tctgccagctgccaccaggaggctgtggagcagaccatcatggctcttcagatggaccgt
gacagcgatgtcaagtattttgcaagcatccaccctgccagtaccaaaatctccgaagat
gccatgagcacagcgtcctcaacctactag