GENSCAN 1.0	Date run:  5-Nov-116	Time: 04:50:25

Sequence gi568815595r:190208280_190422206 : 213927 bp : 37.40% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7376   7381    6  1  0   73  127     7 0.397   3.67
 1.02 Intr +  14421  14528  108  2  0   69   67    88 0.234   4.36
 1.03 Term +  27264  27371  108  2  0  139   40    29 0.282   0.73
 1.04 PlyA +  28048  28053    6                               1.05

 2.02 PlyA -  29656  29651    6                               1.05
 2.01 Sngl -  37786  37448  339  1  0   96   49   156 0.620   8.29
 2.00 Prom -  39977  39938   40                              -5.85

 3.00 Prom +  46867  46906   40                              -6.25
 3.01 Init +  47488  47692  205  0  1   75  102   154 0.687  14.61
 3.02 Term +  48536  48558   23  0  2  115   37    32 0.945  -1.70
 3.03 PlyA +  48863  48868    6                               1.05

 4.00 Prom +  50225  50264   40                              -8.15
 4.01 Init +  50391  50477   87  2  0   47   84   113 0.964   7.49
 4.02 Intr +  50529  50654  126  2  0   -5   66   150 0.651   3.46
 4.03 Term +  53670  53861  192  2  0   56   41   147 0.904   3.24
 4.04 PlyA +  54790  54795    6                               1.05

 5.03 PlyA -  54823  54818    6                               1.05
 5.02 Term -  75388  75227  162  1  0   93   41   125 0.946   5.25
 5.01 Init -  79914  78847 1068  0  0   50   42   371 0.593  23.07
 5.00 Prom -  80184  80145   40                              -8.95

 6.02 PlyA -  81370  81365    6                               1.05
 6.01 Sngl -  84629  84180  450  2  0   59   47   317 0.436  20.66
 6.00 Prom -  91085  91046   40                              -7.15

 7.07 PlyA -  91252  91247    6                               1.05
 7.06 Term -  91682  91576  107  0  2   83   48    99 0.927   2.99
 7.05 Intr -  98446  98314  133  1  1   94   61    98 0.383   7.00
 7.04 Intr - 100160 100004  157  1  1  107   -7    99 0.704   1.39
 7.03 Intr - 101974 101890   85  2  1   82   97    53 0.970   3.56
 7.02 Intr - 104757 104593  165  1  0   29   90   119 0.170   5.21
 7.01 Init - 113927 113705  223  2  1   87   73   437 0.479  38.86
 7.00 Prom - 114201 114162   40                              -4.15

 8.00 Prom + 116747 116786   40                              -5.85
 8.01 Init + 128063 128143   81  1  0   71   98    72 0.779   7.52
 8.02 Intr + 132760 132825   66  0  0   81   86    46 0.410   1.88
 8.03 Term + 133099 133224  126  0  0   90   44    81 0.498   1.20
 8.04 PlyA + 134215 134220    6                               1.05

 9.02 PlyA - 136343 136338    6                               1.05
 9.01 Sngl - 138569 138351  219  2  0   89   54   146 0.841   6.23
 9.00 Prom - 147960 147921   40                              -4.65

10.00 Prom + 150053 150092   40                              -6.85
10.01 Init + 151613 151661   49  1  1   69   63    90 0.310   5.76
10.02 Intr + 162614 162722  109  0  1   85   84    99 0.982   7.62
10.03 Term + 164677 164779  103  1  1  139   38    63 0.883   3.17
10.04 PlyA + 164936 164941    6                               1.05

11.00 Prom + 171231 171270   40                              -5.35
11.01 Init + 180051 180164  114  2  0   96   94    70 0.900   8.82
11.02 Intr + 190002 190103  102  2  0   67   11   121 0.615   1.75
11.03 Intr + 194058 194160  103  2  1   84   57   100 0.958   5.33
11.04 Intr + 196483 196647  165  2  0   94   86   138 0.901  13.21
11.05 Intr + 200035 200226  192  2  0   99  116   -21 0.420   0.34
11.06 Term + 201624 201757  134  1  2   70   38    97 0.802   0.17
11.07 PlyA + 202659 202664    6                               1.05

12.02 PlyA - 203414 203409    6                               1.05
12.01 Sngl - 209125 208448  678  1  0   59   54   266 0.972  16.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  42511  42477   35  2  2   94  103     1 0.820  -0.78
S.002 Init -  43547  43463   85  2  1  102   81    71 0.920   8.83
S.003 Sngl - 126435 126142  294  0  0   66   39   171 0.925   5.45


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_1|73_aa
MTDLEVSLVKAVKQQRWQPVPPSASFVPGKHGPVADPENFHNYDTIRCSRLISHTDTVLA
LKSAMSLSSSGLI

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_1|222_bp
atgacggacctggaggtgtcactagtgaaggctgtgaaacagcaaagatggcagcctgtt
cctccttctgcaagctttgtcccagggaaacacggacctgttgctgacccagagaacttt
cataattatgatacaataagatgttccagactcatctctcacactgatactgtcctagcc
ctgaaatcagccatgtctcttagtagctctggtttaatttag

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_2|112_aa
MGLSWSTSARAMWKENMGLEPPHRVPTGALPSGAVRRGPLSTRPQNDRSTKSLHHVPRKA
TDTQCQPVKTAGREAVLCKVMEVELCKTMGTHLLHQCDLDVRPEVKGGHFGA

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_2|339_bp
atggggctgtcatggagtacctctgctagggcaatgtggaaggaaaatatggggttggag
cccccacacagagtccctactggggcactgcctagtggagctgtgagaagagggccacta
tctaccagaccccagaatgatagatccaccaagagtttgcatcatgtgcctcgaaaagcc
acagacactcaatgccagcctgtgaaaacagctgggagggaggctgtactctgcaaagtc
atggaggtggagctgtgcaagactatgggaacccatctcttgcatcagtgtgatctggat
gtgagacctgaagtcaaaggaggtcattttggagcttga

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_3|75_aa
MELGFELRSLAPEPALLCRIITQQSRVAVYSRRRNRNYKAFSAERNLVHLKDQKKDNVAF
HGGSGSRKGIRVHST

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_3|228_bp
atggagcttggatttgaactgagaagcctagctccagaacctgccctgttgtgccgtatc
atcactcaacaatctagggtagcagtgtattccagaagaagaaatagaaattacaaagcc
tttagtgcagaaaggaacctggtgcatttgaaagaccaaaagaaggataatgtggccttt
catggagggagtggaagcaggaaaggtattcgagttcatagcacataa

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_4|134_aa
MQALCALLAPKCSTPIAELNANQRLQLCRFRVVIQQFSDTEKVMDFKENAECRDEGLRRM
AQLMITLHNFTVCECVCVHECADLGLASSAVVLEGKTTALNSPGYHQPVFQIYNGGGLGN
HSRPPTKKINENNI

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_4|405_bp
atgcaggccttatgtgccttactggctcccaagtgctccactccaattgctgaactgaat
gctaatcagcgactccagctgtgcaggttcagagtagttattcagcagttcagtgacaca
gagaaggtcatggacttcaaagagaatgctgaatgcagagatgaaggcctgcgcagaatg
gcccagttaatgatcacacttcataatttcacggtgtgtgagtgtgtatgtgtgcatgag
tgtgctgacctgggcttggctagctcagctgttgttttggaaggcaaaaccacagctcta
aattccccagggtatcatcagccagtgttccagatctacaatggtggtggtcttgggaat
cacagcagaccacccacaaagaaaataaatgaaaacaacatctag

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_5|409_aa
MSELPFTIASKGIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGIMLP
DFKLYYKATVTKTAWYWHQNRHIDQWNRTEPSEIMLLIYNYLIFDKPEKNKQWGKDSLFN
KWCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNIRPKTIKTLEENLGITIQDIGMGKD
FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTEWEKIFATYSSDKGLISRI
YNELKHIYKKKTNNPIKKWVKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQTKTTTKKK
REKNQINKKGKGNITTDTIVIQRINRDNYEQIYANKIESLEKMDERLEA

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_5|1230_bp
atgagtgaactcccattcacaattgcttcaaagggaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatgggtgggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcatctggaaccaaaaaaga
gcccgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctccct
gacttcaaactatactacaaggctacagtaactaaaacagcatggtactggcaccaaaac
agacatatagatcaatggaacagaacagagccctcagaaataatgctgcttatctacaac
tatctgatcttcgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttcctt
acaccttatacaaaaattaattcaagatggattaaagacttaaacattagacctaaaacc
ataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacct
acagaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatc
tacaatgaactcaaacacatttacaagaaaaaaacaaacaaccccatcaaaaagtgggtg
aaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaa
aaatgctcatcatcactggccatcagagaaatgcaaaccaaaaccacaactaagaaaaaa
agggagaagaaccaaataaataaaaagggaaaaggaaacattactactgacaccatagta
atacagagaatcaatagagacaattatgaacaaatatatgccaacaaaattgaaagccta
gaaaaaatggatgaacgtctggaagcataa

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_6|149_aa
MWESLELPRDLLNGFDQNADSDVDNEVQAEVVSDGDEELTGNWNEDHFCYALAKRLVAFC
LFPRDMWNFKLERDDLKLEVMFKREAEHKSLENLQPDDAIEKEKPISGEKFKPAAEICIS
NKEPNINSQDNGENISRACQRSLRQPFPS

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_6|450_bp
atgtgggaaagtttggaacttcctagagacttgttgaatggttttgaccaaaatgctgat
agtgatgtggacaatgaagtccaagctgaggtggtctcagatggagatgaggaacttact
gggaactggaatgaagatcacttttgctatgctttagcaaagagactggtggcattttgc
ctcttccctagagatatgtggaactttaaacttgagagagatgatctgaaattggaagtt
atgtttaaaagggaagcagagcataaaagtttggaaaatttgcagcctgatgatgcaata
gaaaaagaaaaacccatttctggggagaaattcaagccagctgcagaaatttgcataagt
aataaggagccaaacattaatagccaagacaatggggaaaatatctccagggcatgtcag
agatctttgaggcagccctttccatcatag

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_7|289_aa
MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQAMYEGLWMSCVSQSTG
QIQCKVFDSLLNLSSTLQATRALMVVGILLGVIAIFVATVGMKCMKCLEDDEVQKMRMAV
IGGAIFLLAGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
LLCCSCPRKTTSYPTPRPYPKPAPSSGKDYSVQNAISLEQDDVMERVLALVSGDLDLSLG
AINHRLCLSKAFGCLYGFRSHGYFGSRKVTLPSLLPPYASQEDEDAKEG

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_7|870_bp
atggccaacgcggggctgcagctgttgggcttcattctcgccttcctgggatggatcggc
gccatcgtcagcactgccctgccccagtggaggatttactcctatgccggcgacaacatc
gtgaccgcccaggccatgtacgaggggctgtggatgtcctgcgtgtcgcagagcaccggg
cagatccagtgcaaagtctttgactccttgctgaatctgagcagcacattgcaagcaacc
cgtgccttgatggtggttggcatcctcctgggagtgatagcaatctttgtggccaccgtt
ggcatgaagtgtatgaagtgcttggaagacgatgaggtgcagaagatgaggatggctgtc
attgggggtgcgatatttcttcttgcaggtctggctattttagttgccacagcatggtat
ggcaatagaatcgttcaagaattctatgaccctatgaccccagtcaatgccaggtacgaa
tttggtcaggctctcttcactggctgggctgctgcttctctctgccttctgggaggtgcc
ctactttgctgttcctgtccccgaaaaacaacctcttacccaacaccaaggccctatcca
aaacctgcaccttccagcgggaaagactactctgtacagaatgctatttcacttgagcaa
gatgatgtaatggaaagggtgttggcattggtgtctggagacctggatttgagtcttggt
gctatcaatcaccgtctgtgtttgagcaaggcatttggctgcttgtatggcttccgttct
catggttattttggttccaggaaggttactctaccctcactcttaccaccttatgcaagt
caagaagatgaagacgcaaaagaaggataa

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_8|90_aa
MQIQWLATYTMLLGIQWSGAYSNIPSKGRAFPPAAFMGWHDIECLQLFQAQHQVEAAKVW
ELHPLKSWPELYVGPFQPWLEQLGCRVPSP

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_8|273_bp
atgcagattcagtggcttgccacatatacgatgcttttagggatccagtggtctggtgca
tactcgaacatcccttccaagggtagagcttttcctccagctgctttcatgggctggcat
gacattgagtgtctgcagcttttccaggctcaacaccaggtggaagctgccaaggtttgg
gaattgcaccctctgaagtcatggcctgagctctatgttggcccctttcagccatggctg
gagcagctgggatgcagggtaccaagtccctag

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_9|72_aa
MGRGKAMGDTGENVMWKGRGWGDGSASQATPGIVSNHYKLGEGREGYFPRSPSDKAYDLT
GILISDVWAPEK

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_9|219_bp
atgggcagagggaaggcaatgggagacacaggggagaatgtcatgtggaaaggcagaggc
tggggtgatggatctgcaagccaagcaacaccagggattgtgagtaaccactacaagcta
ggagaaggcagggaaggatacttcccaagatccccttcagacaaagcctatgaccttact
ggtatcctgatctcagacgtctgggctccagaaaaatga

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_10|86_aa
MRLDVKKHGSRVLALKDDSCPQTSDSKFLSFGTQTGFLAPQLADELLWDLVIIISACVGI
LTVHADNLPDSSKGSPFVCSAFQSLT

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_10|261_bp
atgaggctcgatgtgaagaaacatggatctcgagttttggcactgaaagatgattcctgc
cctcaaacatcggactccaagttcttgagttttgggactcagactggctttcttgctcct
cagcttgcagatgaactactgtgggatcttgtgatcatcatttctgcctgtgtcggaatc
cttactgtacatgctgataatctgcctgactcttcaaagggcagcccctttgtttgttct
gccttccagtccctgacatag

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_11|269_aa
MRDLLQYIACFFAFFSAGFLIVATWTDCWMVNADDSLEFWRLEAYNQEVGKAALPLKVLE
ESVLSLFQLLVAVSTKCRGLWWECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITAD
ILAGFGFLTLLLGLDCVKFLPDEPYIKVRICFVAGATLLIAGTPGIIGSVWYAVDVYVER
STLVLHNIFLGIQYKFGWSCWLGMAGSLGCFLAGAVLTCCLYLFKDVGPERNYPYSLRKA
YSAAGVSMAKSYSAPRTETAKMYAVDTRV

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_11|810_bp
atgagggatcttcttcaatacatcgcttgcttctttgcctttttctctgctgggtttttg
attgtggccacctggactgactgttggatggtgaatgctgatgactctctggagttctgg
aggctggaagcttataatcaagaagttggcaaggctgcgctgcccctgaaagttctggaa
gaatccgttcttagcctcttccagcttctggtggctgtgagcacaaaatgccgaggcctc
tggtgggaatgcgtcacaaatgcttttgatgggattcgcacctgtgatgagtacgattcc
atacttgcggagcatcccttgaagctggtggtaactcgagcgttgatgattactgcagat
attctagctgggtttggatttctcaccctgctccttggtcttgactgcgtgaaattcctc
cctgatgagccgtacattaaagtccgcatctgctttgttgctggagccacgttactaata
gcaggtaccccaggaatcattggctctgtgtggtatgctgttgatgtgtatgtggaacgt
tctactttggttttgcacaatatatttcttggtatccaatataaatttggttggtcctgt
tggctcggaatggctgggtctctgggttgctttttggctggagctgttctcacctgctgc
ttatatctttttaaagatgttggacctgagagaaactatccttattccttgaggaaagcc
tattcagccgcgggtgtttccatggccaagtcatactcagcccctcgcacagagacggcc
aaaatgtatgctgtagacacaagggtgtaa

>gi568815595r:190208280_190422206|GENSCAN_predicted_peptide_12|225_aa
MWESLEPPRDLLNGLHQNADSDVDSEVQAEVVSNGDKELSRSWNEDYSCCALAKRLVAFC
LCPIYLWNFELQRDYLKLDLMFKKEIEHKSLENLWPDNVIEKKNPFSGEKFKLAVEISLS
NKKPNINSQDNWENISRACQRLLRQPLPSQAWKPRRKRWFRGPGPWLCCFVQPWDLVSCV
PAAPAPVGTTRGQGTAQAIVLEAANPWQLPHGVGPVGAQNSRIKV

>gi568815595r:190208280_190422206|GENSCAN_predicted_CDS_12|678_bp
atgtgggaaagtttggaacctcctagagatttgttgaatggtttgcaccaaaatgctgat
agtgatgtggacagtgaagttcaagccgaggtggtctcaaatggagataaggaacttagt
aggagctggaatgaagattactcttgctgtgctttagcaaagagactggtggcattttgc
ctctgccctatatatctgtggaactttgaacttcaaagagattatctgaaattggatctt
atgtttaaaaaggaaatagagcataaaagtttggaaaatttgtggcctgacaatgtgata
gaaaagaaaaacccattttctggggagaaattcaagctggctgtagaaattagcctgagt
aataagaagccaaacattaatagccaagacaattgggaaaatatctccagggcatgtcag
agacttttgaggcagcccctcccatcacaggcctggaagcctaggaggaaaagatggttt
cgtgggccaggcccctggctctgctgctttgtgcagccttgggatttggtgtcctgtgtc
ccagcagctccagctccagttggcactacaaggggccaaggaacagctcaggccatagtt
ttagaagctgccaatccttggcagcttccacatggtgttgggcctgtgggtgcacagaat
tcaagaattaaggtttga